RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NUTM2DQ5VT03 806 aaPredicted RBP27.36■■□□□ 1.97
SSH1-209ENST00000551165 TESK2Q96S53 571 aa27.36■■□□□ 1.97
SSH1-209ENST00000551165 PPLO60437 1756 aa27.34■■□□□ 1.97
SSH1-209ENST00000551165 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
SSH1-209ENST00000551165 NRXN1Q9ULB1 1477 aa27.34■■□□□ 1.97
SSH1-209ENST00000551165 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
SSH1-209ENST00000551165 ERVK-7P63135 1459 aa27.32■■□□□ 1.96
SSH1-209ENST00000551165 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
SSH1-209ENST00000551165 IQGAP1P46940 1657 aa27.32■■□□□ 1.96
SSH1-209ENST00000551165 SLC52A1Q9NWF4 448 aa27.31■■□□□ 1.96
SSH1-209ENST00000551165 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
SSH1-209ENST00000551165 DISP3Q9P2K9 1392 aa27.29■■□□□ 1.96
SSH1-209ENST00000551165 MYO5BQ9ULV0 1848 aa27.29■■□□□ 1.96
SSH1-209ENST00000551165 CENPBP07199 599 aaPredicted RBP27.29■■□□□ 1.96
SSH1-209ENST00000551165 CCER2I3L3R5 266 aa27.28■■□□□ 1.96
SSH1-209ENST00000551165 SCAF11Q99590 1463 aaKnown RBP27.27■■□□□ 1.96
SSH1-209ENST00000551165 NEXMIFQ5QGS0 1516 aa27.27■■□□□ 1.96
SSH1-209ENST00000551165 RPGRIP1LQ68CZ1 1315 aa27.27■■□□□ 1.96
SSH1-209ENST00000551165 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
SSH1-209ENST00000551165 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
SSH1-209ENST00000551165 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
SSH1-209ENST00000551165 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
SSH1-209ENST00000551165 ZMYM3Q14202 1370 aa27.23■■□□□ 1.95
SSH1-209ENST00000551165 PRKRIP1Q9H875 184 aaPredicted RBP27.23■■□□□ 1.95
SSH1-209ENST00000551165 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
SSH1-209ENST00000551165 SPATA31D1Q6ZQQ2 1576 aa27.21■■□□□ 1.95
SSH1-209ENST00000551165 C14orf93Q9H972 538 aaKnown RBP27.21■■□□□ 1.95
SSH1-209ENST00000551165 TMEM132EQ6IEE7 984 aa27.2■■□□□ 1.95
SSH1-209ENST00000551165 CCDC184Q52MB2 194 aa27.19■■□□□ 1.94
SSH1-209ENST00000551165 TMF1P82094 1093 aa27.18■■□□□ 1.94
SSH1-209ENST00000551165 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
SSH1-209ENST00000551165 ADGRB1O14514 1584 aa27.15■■□□□ 1.94
SSH1-209ENST00000551165 STAG3Q9UJ98 1225 aa27.14■■□□□ 1.94
SSH1-209ENST00000551165 SETBP1Q9Y6X0 1596 aa27.13■■□□□ 1.93
SSH1-209ENST00000551165 TRAK1Q9UPV9 953 aa27.13■■□□□ 1.93
SSH1-209ENST00000551165 EIF3AQ14152 1382 aaKnown RBP27.12■■□□□ 1.93
SSH1-209ENST00000551165 A2ML1A8K2U0 1454 aa27.1■■□□□ 1.93
SSH1-209ENST00000551165 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
SSH1-209ENST00000551165 CEBPAP49715 358 aaPredicted RBP27.09■■□□□ 1.93
SSH1-209ENST00000551165 PER1O15534 1290 aaPredicted RBP27.05■■□□□ 1.92
SSH1-209ENST00000551165 PANK3Q9H999 370 aa27.05■■□□□ 1.92
SSH1-209ENST00000551165 TNRQ92752 1358 aa27.03■■□□□ 1.92
SSH1-209ENST00000551165 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
SSH1-209ENST00000551165 ASXL1Q8IXJ9 1541 aa27.02■■□□□ 1.92
SSH1-209ENST00000551165 MYO3AQ8NEV4 1616 aa27.02■■□□□ 1.92
SSH1-209ENST00000551165 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
SSH1-209ENST00000551165 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
SSH1-209ENST00000551165 RIMS2Q9UQ26 1411 aa27■■□□□ 1.91
SSH1-209ENST00000551165 MRS2Q9HD23 443 aa26.99■■□□□ 1.91
SSH1-209ENST00000551165 STK26Q9P289 416 aa26.99■■□□□ 1.91
SSH1-209ENST00000551165 QRICH2Q9H0J4 1663 aa26.96■■□□□ 1.91
SSH1-209ENST00000551165 CDCA8Q53HL2 280 aa26.95■■□□□ 1.91
SSH1-209ENST00000551165 MYOM1P52179 1685 aa26.95■■□□□ 1.9
SSH1-209ENST00000551165 ALKQ9UM73 1620 aa26.95■■□□□ 1.9
SSH1-209ENST00000551165 ARHGEF28Q8N1W1 1705 aaKnown RBP26.95■■□□□ 1.9
SSH1-209ENST00000551165 C3P01024 1663 aa26.95■■□□□ 1.9
SSH1-209ENST00000551165 FER1L4A9Z1Z3 1794 aa26.94■■□□□ 1.9
SSH1-209ENST00000551165 SBNO2Q9Y2G9 1366 aa26.94■■□□□ 1.9
SSH1-209ENST00000551165 KDM5AP29375 1690 aaKnown RBP26.93■■□□□ 1.9
SSH1-209ENST00000551165 SAFB2Q14151 953 aaKnown RBP eCLIP26.92■■□□□ 1.9
SSH1-209ENST00000551165 CC2D1BQ5T0F9 858 aaKnown RBP26.91■■□□□ 1.9
SSH1-209ENST00000551165 FAM9BQ8IZU0 186 aa26.91■■□□□ 1.9
SSH1-209ENST00000551165 UBR1Q8IWV7 1749 aa26.9■■□□□ 1.9
SSH1-209ENST00000551165 PTPRMP28827 1452 aa26.9■■□□□ 1.9
SSH1-209ENST00000551165 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
SSH1-209ENST00000551165 YTHDC2Q9H6S0 1430 aaKnown RBP26.88■■□□□ 1.89
SSH1-209ENST00000551165 KTN1Q86UP2 1357 aaKnown RBP26.87■■□□□ 1.89
SSH1-209ENST00000551165 PARD3Q8TEW0 1356 aa26.86■■□□□ 1.89
SSH1-209ENST00000551165 SLC24A1O60721 1099 aa26.86■■□□□ 1.89
SSH1-209ENST00000551165 RALBP1Q15311 655 aa26.86■■□□□ 1.89
SSH1-209ENST00000551165 NRXN3Q9Y4C0 1643 aa26.85■■□□□ 1.89
SSH1-209ENST00000551165 TMEM2Q9UHN6 1383 aa26.85■■□□□ 1.89
SSH1-209ENST00000551165 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
SSH1-209ENST00000551165 HNRNPUQ00839 825 aaKnown RBP eCLIP26.84■■□□□ 1.89
SSH1-209ENST00000551165 MYBBP1AQ9BQG0 1328 aaKnown RBP26.84■■□□□ 1.89
SSH1-209ENST00000551165 PRAM1Q96QH2 718 aa26.83■■□□□ 1.89
SSH1-209ENST00000551165 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.88
SSH1-209ENST00000551165 TULP4Q9NRJ4 1543 aa26.82■■□□□ 1.88
SSH1-209ENST00000551165 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
SSH1-209ENST00000551165 KNSTRNQ9Y448 316 aa26.81■■□□□ 1.88
SSH1-209ENST00000551165 LTKP29376 864 aa26.8■■□□□ 1.88
SSH1-209ENST00000551165 AMER1Q5JTC6 1135 aaPredicted RBP26.8■■□□□ 1.88
SSH1-209ENST00000551165 CARD14Q9BXL6 1004 aa26.8■■□□□ 1.88
SSH1-209ENST00000551165 METP08581 1390 aa26.8■■□□□ 1.88
SSH1-209ENST00000551165 TMC1Q8TDI8 760 aa26.79■■□□□ 1.88
SSH1-209ENST00000551165 SLC12A5Q9H2X9 1139 aa26.79■■□□□ 1.88
SSH1-209ENST00000551165 MINK1Q8N4C8 1332 aaPredicted RBP26.78■■□□□ 1.88
SSH1-209ENST00000551165 CABP2Q9NPB3 220 aa26.77■■□□□ 1.88
SSH1-209ENST00000551165 POGKQ9P215 609 aa26.77■■□□□ 1.88
SSH1-209ENST00000551165 WAPLQ7Z5K2 1190 aa26.76■■□□□ 1.87
SSH1-209ENST00000551165 BCANQ96GW7 911 aa26.76■■□□□ 1.87
SSH1-209ENST00000551165 EVC2Q86UK5 1308 aa26.76■■□□□ 1.87
SSH1-209ENST00000551165 RIMS1Q86UR5 1692 aaKnown RBP26.76■■□□□ 1.87
SSH1-209ENST00000551165 PNISRQ8TF01 805 aaKnown RBP26.76■■□□□ 1.87
SSH1-209ENST00000551165 HDGFP51858 240 aaKnown RBP26.75■■□□□ 1.87
SSH1-209ENST00000551165 PLEKHH1Q9ULM0 1364 aa26.74■■□□□ 1.87
SSH1-209ENST00000551165 BRD4O60885 1362 aaPredicted RBP26.74■■□□□ 1.87
SSH1-209ENST00000551165 LRPPRCP42704 1394 aaKnown RBP26.74■■□□□ 1.87
SSH1-209ENST00000551165 TXNDC2Q86VQ3 553 aa26.72■■□□□ 1.87
SSH1-209ENST00000551165 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms