RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 RPGRIP1LQ68CZ1 1315 aa31.2■■■□□ 2.58
NEK3-202ENST00000550841 ARHGAP23Q9P227 1491 aa31.2■■■□□ 2.58
NEK3-202ENST00000550841 MYO5BQ9ULV0 1848 aa31.18■■■□□ 2.58
NEK3-202ENST00000550841 RIMS2Q9UQ26 1411 aa31.16■■■□□ 2.58
NEK3-202ENST00000550841 RGL3Q3MIN7 710 aa31.16■■■□□ 2.58
NEK3-202ENST00000550841 NEURL4Q96JN8 1562 aa31.15■■■□□ 2.58
NEK3-202ENST00000550841 IQSEC2Q5JU85 1478 aa31.14■■■□□ 2.58
NEK3-202ENST00000550841 PPP1R15AO75807 674 aaPredicted RBP31.14■■■□□ 2.58
NEK3-202ENST00000550841 LTKP29376 864 aa31.14■■■□□ 2.58
NEK3-202ENST00000550841 ZNF335Q9H4Z2 1342 aaPredicted RBP31.14■■■□□ 2.58
NEK3-202ENST00000550841 SPATA31E1Q6ZUB1 1445 aa31.14■■■□□ 2.58
NEK3-202ENST00000550841 SCAF11Q99590 1463 aaKnown RBP31.12■■■□□ 2.57
NEK3-202ENST00000550841 VGFO15240 615 aaPredicted RBP31.11■■■□□ 2.57
NEK3-202ENST00000550841 ZFYVE9O95405 1425 aa31.11■■■□□ 2.57
NEK3-202ENST00000550841 CLSPNQ9HAW4 1339 aa31.11■■■□□ 2.57
NEK3-202ENST00000550841 CCER1Q8TC90 406 aaPredicted RBP31.1■■■□□ 2.57
NEK3-202ENST00000550841 SIN3AQ96ST3 1273 aa31.09■■■□□ 2.57
NEK3-202ENST00000550841 NEUROD1Q13562 356 aa31.08■■■□□ 2.57
NEK3-202ENST00000550841 POLR1AO95602 1720 aaPredicted RBP31.07■■■□□ 2.56
NEK3-202ENST00000550841 MED14O60244 1454 aa31.07■■■□□ 2.56
NEK3-202ENST00000550841 DISP3Q9P2K9 1392 aa31.06■■■□□ 2.56
NEK3-202ENST00000550841 STAC3Q96MF2 364 aa31.06■■■□□ 2.56
NEK3-202ENST00000550841 NUTM2DQ5VT03 806 aaPredicted RBP31.05■■■□□ 2.56
NEK3-202ENST00000550841 BCANQ96GW7 911 aa31.05■■■□□ 2.56
NEK3-202ENST00000550841 NPHP4O75161 1426 aaPredicted RBP31.05■■■□□ 2.56
NEK3-202ENST00000550841 UBAP1LF5GYI3 381 aa31.03■■■□□ 2.56
NEK3-202ENST00000550841 NEXMIFQ5QGS0 1516 aa31.03■■■□□ 2.56
NEK3-202ENST00000550841 PLEKHG1Q9ULL1 1385 aa31.02■■■□□ 2.56
NEK3-202ENST00000550841 DCAF11Q8TEB1 546 aa30.98■■■□□ 2.55
NEK3-202ENST00000550841 PPLO60437 1756 aa30.97■■■□□ 2.55
NEK3-202ENST00000550841 IQGAP1P46940 1657 aa30.95■■■□□ 2.55
NEK3-202ENST00000550841 KDM2AQ9Y2K7 1162 aa30.93■■■□□ 2.54
NEK3-202ENST00000550841 TBX22Q9Y458 520 aa30.92■■■□□ 2.54
NEK3-202ENST00000550841 L3MBTL2Q969R5 705 aa30.91■■■□□ 2.54
NEK3-202ENST00000550841 ADGRF5Q8IZF2 1346 aa30.91■■■□□ 2.54
NEK3-202ENST00000550841 IFT172Q9UG01 1749 aa30.9■■■□□ 2.54
NEK3-202ENST00000550841 SLC26A8Q96RN1 970 aa30.9■■■□□ 2.54
NEK3-202ENST00000550841 TONSLQ96HA7 1378 aa30.9■■■□□ 2.54
NEK3-202ENST00000550841 MYOM2P54296 1465 aa30.89■■■□□ 2.53
NEK3-202ENST00000550841 SENP3Q9H4L4 574 aaPredicted RBP30.88■■■□□ 2.53
NEK3-202ENST00000550841 TIMELESSQ9UNS1 1208 aa30.87■■■□□ 2.53
NEK3-202ENST00000550841 ILDR2Q71H61 639 aa30.86■■■□□ 2.53
NEK3-202ENST00000550841 SETBP1Q9Y6X0 1596 aa30.85■■■□□ 2.53
NEK3-202ENST00000550841 ADAMTS13Q76LX8 1427 aa30.83■■■□□ 2.53
NEK3-202ENST00000550841 DIP2AQ14689 1571 aa30.83■■■□□ 2.53
NEK3-202ENST00000550841 TOM1O60784 492 aa30.82■■■□□ 2.52
NEK3-202ENST00000550841 NRXN1Q9ULB1 1477 aa30.82■■■□□ 2.52
NEK3-202ENST00000550841 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
NEK3-202ENST00000550841 CPS1P31327 1500 aa30.81■■■□□ 2.52
NEK3-202ENST00000550841 PIK3C2GO75747 1445 aa30.8■■■□□ 2.52
NEK3-202ENST00000550841 PIK3R4Q99570 1358 aa30.79■■■□□ 2.52
NEK3-202ENST00000550841 C14orf93Q9H972 538 aaKnown RBP30.79■■■□□ 2.52
NEK3-202ENST00000550841 KCNA6P17658 529 aa30.77■■■□□ 2.52
NEK3-202ENST00000550841 PIP4K2BP78356 416 aa30.77■■■□□ 2.52
NEK3-202ENST00000550841 NRXN3Q9Y4C0 1643 aa30.76■■■□□ 2.52
NEK3-202ENST00000550841 ALKQ9UM73 1620 aa30.76■■■□□ 2.51
NEK3-202ENST00000550841 SOCS7O14512 581 aa30.73■■■□□ 2.51
NEK3-202ENST00000550841 CFAP70Q5T0N1 1121 aa30.73■■■□□ 2.51
NEK3-202ENST00000550841 METP08581 1390 aa30.7■■■□□ 2.51
NEK3-202ENST00000550841 PRAG1Q86YV5 1406 aa30.7■■■□□ 2.5
NEK3-202ENST00000550841 AMOTL2Q9Y2J4 779 aa30.68■■■□□ 2.5
NEK3-202ENST00000550841 LAMC1P11047 1609 aa30.68■■■□□ 2.5
NEK3-202ENST00000550841 HSPA1LP34931 641 aa30.67■■■□□ 2.5
NEK3-202ENST00000550841 CHD2O14647 1828 aaKnown RBP30.66■■■□□ 2.5
NEK3-202ENST00000550841 TMEM132EQ6IEE7 984 aa30.64■■■□□ 2.5
NEK3-202ENST00000550841 SETD1AO15047 1707 aaKnown RBP30.63■■■□□ 2.49
NEK3-202ENST00000550841 PROSER2Q86WR7 435 aaPredicted RBP30.61■■■□□ 2.49
NEK3-202ENST00000550841 PTPRUQ92729 1446 aa30.61■■■□□ 2.49
NEK3-202ENST00000550841 KIAA1210Q9ULL0 1709 aa30.61■■■□□ 2.49
NEK3-202ENST00000550841 NBPF8Q3BBV2 869 aa30.6■■■□□ 2.49
NEK3-202ENST00000550841 NWD1Q149M9 1564 aa30.59■■■□□ 2.49
NEK3-202ENST00000550841 LRPPRCP42704 1394 aaKnown RBP30.59■■■□□ 2.49
NEK3-202ENST00000550841 NKTRP30414 1462 aaKnown RBP30.58■■■□□ 2.49
NEK3-202ENST00000550841 STK26Q9P289 416 aa30.58■■■□□ 2.49
NEK3-202ENST00000550841 ABCC11Q96J66 1382 aa30.57■■■□□ 2.48
NEK3-202ENST00000550841 YTHDC2Q9H6S0 1430 aaKnown RBP30.56■■■□□ 2.48
NEK3-202ENST00000550841 STRCP1A6NGW2 1772 aa30.56■■■□□ 2.48
NEK3-202ENST00000550841 NBPF1Q3BBV0 1214 aa30.55■■■□□ 2.48
NEK3-202ENST00000550841 SIRT1Q96EB6 747 aa30.55■■■□□ 2.48
NEK3-202ENST00000550841 LRRC7Q96NW7 1537 aa30.53■■■□□ 2.48
NEK3-202ENST00000550841 ADGRB1O14514 1584 aa30.52■■■□□ 2.48
NEK3-202ENST00000550841 ASXL1Q8IXJ9 1541 aa30.52■■■□□ 2.48
NEK3-202ENST00000550841 XRN1Q8IZH2 1706 aaKnown RBP30.51■■■□□ 2.47
NEK3-202ENST00000550841 ROCK2O75116 1388 aaKnown RBP30.51■■■□□ 2.47
NEK3-202ENST00000550841 TECPR2O15040 1411 aa30.49■■■□□ 2.47
NEK3-202ENST00000550841 PTCH1Q13635 1447 aa30.49■■■□□ 2.47
NEK3-202ENST00000550841 NCOA3Q9Y6Q9 1424 aa30.49■■■□□ 2.47
NEK3-202ENST00000550841 TRPM1Q7Z4N2 1603 aa30.49■■■□□ 2.47
NEK3-202ENST00000550841 TRAK1Q9UPV9 953 aa30.49■■■□□ 2.47
NEK3-202ENST00000550841 TMEM94Q12767 1356 aa30.47■■■□□ 2.47
NEK3-202ENST00000550841 RALGAPBQ86X10 1494 aa30.45■■■□□ 2.47
NEK3-202ENST00000550841 ROBO2Q9HCK4 1378 aa30.45■■■□□ 2.47
NEK3-202ENST00000550841 C14orf37Q86TY3 774 aa30.45■■■□□ 2.47
NEK3-202ENST00000550841 CARD11Q9BXL7 1154 aa30.44■■■□□ 2.46
NEK3-202ENST00000550841 POGKQ9P215 609 aa30.44■■■□□ 2.46
NEK3-202ENST00000550841 FAM135BQ49AJ0 1406 aa30.44■■■□□ 2.46
NEK3-202ENST00000550841 KNDC1Q76NI1 1749 aa30.44■■■□□ 2.46
NEK3-202ENST00000550841 GPRASP1Q5JY77 1395 aa30.43■■■□□ 2.46
NEK3-202ENST00000550841 DLC1Q96QB1 1528 aa30.42■■■□□ 2.46
NEK3-202ENST00000550841 RBM33Q96EV2 1170 aaKnown RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms