RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
PFDN5-208ENST00000549995 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
PFDN5-208ENST00000549995 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
PFDN5-208ENST00000549995 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
PFDN5-208ENST00000549995 LTKP29376 864 aa17.65■□□□□ 0.42
PFDN5-208ENST00000549995 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
PFDN5-208ENST00000549995 NWD1Q149M9 1564 aa17.62■□□□□ 0.41
PFDN5-208ENST00000549995 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
PFDN5-208ENST00000549995 STRCP1A6NGW2 1772 aa17.62■□□□□ 0.41
PFDN5-208ENST00000549995 FOXD1Q16676 465 aa17.62■□□□□ 0.41
PFDN5-208ENST00000549995 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
PFDN5-208ENST00000549995 EID1Q9Y6B2 187 aa17.61■□□□□ 0.41
PFDN5-208ENST00000549995 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
PFDN5-208ENST00000549995 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
PFDN5-208ENST00000549995 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
PFDN5-208ENST00000549995 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.59■□□□□ 0.41
PFDN5-208ENST00000549995 CPS1P31327 1500 aa17.58■□□□□ 0.41
PFDN5-208ENST00000549995 ADAMTS13Q76LX8 1427 aa17.58■□□□□ 0.41
PFDN5-208ENST00000549995 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
PFDN5-208ENST00000549995 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
PFDN5-208ENST00000549995 MYOM2P54296 1465 aa17.56■□□□□ 0.4
PFDN5-208ENST00000549995 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
PFDN5-208ENST00000549995 NRXN1Q9ULB1 1477 aa17.55■□□□□ 0.4
PFDN5-208ENST00000549995 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
PFDN5-208ENST00000549995 XRN1Q8IZH2 1706 aaKnown RBP17.53■□□□□ 0.4
PFDN5-208ENST00000549995 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
PFDN5-208ENST00000549995 XIRP1Q702N8 1843 aaKnown RBP17.53■□□□□ 0.4
PFDN5-208ENST00000549995 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
PFDN5-208ENST00000549995 PRAG1Q86YV5 1406 aa17.52■□□□□ 0.4
PFDN5-208ENST00000549995 ZNF335Q9H4Z2 1342 aaPredicted RBP17.51■□□□□ 0.39
PFDN5-208ENST00000549995 LAMC1P11047 1609 aa17.51■□□□□ 0.39
PFDN5-208ENST00000549995 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
PFDN5-208ENST00000549995 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
PFDN5-208ENST00000549995 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
PFDN5-208ENST00000549995 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
PFDN5-208ENST00000549995 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
PFDN5-208ENST00000549995 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
PFDN5-208ENST00000549995 PPP1R15AO75807 674 aaPredicted RBP17.47■□□□□ 0.39
PFDN5-208ENST00000549995 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
PFDN5-208ENST00000549995 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
PFDN5-208ENST00000549995 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
PFDN5-208ENST00000549995 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
PFDN5-208ENST00000549995 STAC3Q96MF2 364 aa17.44■□□□□ 0.38
PFDN5-208ENST00000549995 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
PFDN5-208ENST00000549995 KCNA6P17658 529 aa17.43■□□□□ 0.38
PFDN5-208ENST00000549995 SLC26A8Q96RN1 970 aa17.43■□□□□ 0.38
PFDN5-208ENST00000549995 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
PFDN5-208ENST00000549995 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
PFDN5-208ENST00000549995 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
PFDN5-208ENST00000549995 METP08581 1390 aa17.4■□□□□ 0.38
PFDN5-208ENST00000549995 TECPR2O15040 1411 aa17.39■□□□□ 0.38
PFDN5-208ENST00000549995 PTCH1Q13635 1447 aa17.39■□□□□ 0.38
PFDN5-208ENST00000549995 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
PFDN5-208ENST00000549995 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
PFDN5-208ENST00000549995 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
PFDN5-208ENST00000549995 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
PFDN5-208ENST00000549995 NALCNQ8IZF0 1738 aa17.34■□□□□ 0.37
PFDN5-208ENST00000549995 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
PFDN5-208ENST00000549995 DLC1Q96QB1 1528 aa17.33■□□□□ 0.37
PFDN5-208ENST00000549995 TMEM94Q12767 1356 aa17.33■□□□□ 0.36
PFDN5-208ENST00000549995 BCANQ96GW7 911 aa17.33■□□□□ 0.36
PFDN5-208ENST00000549995 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
PFDN5-208ENST00000549995 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
PFDN5-208ENST00000549995 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
PFDN5-208ENST00000549995 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
PFDN5-208ENST00000549995 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
PFDN5-208ENST00000549995 DCCP43146 1447 aa17.3■□□□□ 0.36
PFDN5-208ENST00000549995 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
PFDN5-208ENST00000549995 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
PFDN5-208ENST00000549995 SIN3AQ96ST3 1273 aa17.3■□□□□ 0.36
PFDN5-208ENST00000549995 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
PFDN5-208ENST00000549995 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
PFDN5-208ENST00000549995 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
PFDN5-208ENST00000549995 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
PFDN5-208ENST00000549995 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
PFDN5-208ENST00000549995 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.35
PFDN5-208ENST00000549995 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
PFDN5-208ENST00000549995 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
PFDN5-208ENST00000549995 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
PFDN5-208ENST00000549995 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
PFDN5-208ENST00000549995 ADGRB2O60241 1585 aa17.25■□□□□ 0.35
PFDN5-208ENST00000549995 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
PFDN5-208ENST00000549995 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
PFDN5-208ENST00000549995 MSH6P52701 1360 aa17.24■□□□□ 0.35
PFDN5-208ENST00000549995 RALGAPBQ86X10 1494 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 FMN2Q9NZ56 1722 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 ROBO1Q9Y6N7 1651 aa17.2■□□□□ 0.34
PFDN5-208ENST00000549995 TOM1O60784 492 aa17.19■□□□□ 0.34
PFDN5-208ENST00000549995 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
PFDN5-208ENST00000549995 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
PFDN5-208ENST00000549995 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
PFDN5-208ENST00000549995 MST1RQ04912 1400 aa17.18■□□□□ 0.34
PFDN5-208ENST00000549995 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
PFDN5-208ENST00000549995 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
PFDN5-208ENST00000549995 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
PFDN5-208ENST00000549995 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms