RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.25
PFDN5-208ENST00000549995 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
PFDN5-208ENST00000549995 ABCC9O60706 1549 aa25.02■■□□□ 1.6
PFDN5-208ENST00000549995 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
PFDN5-208ENST00000549995 MYO15BQ96JP2 1530 aa24.32■■□□□ 1.48
PFDN5-208ENST00000549995 NACADO15069 1562 aa24.32■■□□□ 1.48
PFDN5-208ENST00000549995 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
PFDN5-208ENST00000549995 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PFDN5-208ENST00000549995 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
PFDN5-208ENST00000549995 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
PFDN5-208ENST00000549995 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
PFDN5-208ENST00000549995 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
PFDN5-208ENST00000549995 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
PFDN5-208ENST00000549995 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
PFDN5-208ENST00000549995 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
PFDN5-208ENST00000549995 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
PFDN5-208ENST00000549995 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
PFDN5-208ENST00000549995 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
PFDN5-208ENST00000549995 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
PFDN5-208ENST00000549995 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
PFDN5-208ENST00000549995 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
PFDN5-208ENST00000549995 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
PFDN5-208ENST00000549995 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
PFDN5-208ENST00000549995 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
PFDN5-208ENST00000549995 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
PFDN5-208ENST00000549995 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
PFDN5-208ENST00000549995 WIZO95785 1651 aa22.19■■□□□ 1.14
PFDN5-208ENST00000549995 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
PFDN5-208ENST00000549995 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
PFDN5-208ENST00000549995 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
PFDN5-208ENST00000549995 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
PFDN5-208ENST00000549995 NESP48681 1621 aa21.72■■□□□ 1.07
PFDN5-208ENST00000549995 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
PFDN5-208ENST00000549995 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
PFDN5-208ENST00000549995 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
PFDN5-208ENST00000549995 CFTRP13569 1480 aa21.64■■□□□ 1.06
PFDN5-208ENST00000549995 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
PFDN5-208ENST00000549995 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
PFDN5-208ENST00000549995 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
PFDN5-208ENST00000549995 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
PFDN5-208ENST00000549995 CUX2O14529 1486 aa21.43■■□□□ 1.02
PFDN5-208ENST00000549995 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
PFDN5-208ENST00000549995 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
PFDN5-208ENST00000549995 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
PFDN5-208ENST00000549995 WDR62O43379 1518 aa21.38■■□□□ 1.01
PFDN5-208ENST00000549995 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
PFDN5-208ENST00000549995 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
PFDN5-208ENST00000549995 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
PFDN5-208ENST00000549995 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
PFDN5-208ENST00000549995 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
PFDN5-208ENST00000549995 CUX1P39880 1505 aa21.04■□□□□ 0.96
PFDN5-208ENST00000549995 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
PFDN5-208ENST00000549995 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
PFDN5-208ENST00000549995 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
PFDN5-208ENST00000549995 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
PFDN5-208ENST00000549995 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
PFDN5-208ENST00000549995 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
PFDN5-208ENST00000549995 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
PFDN5-208ENST00000549995 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
PFDN5-208ENST00000549995 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
PFDN5-208ENST00000549995 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
PFDN5-208ENST00000549995 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
PFDN5-208ENST00000549995 SOGA1O94964 1423 aa20.79■□□□□ 0.92
PFDN5-208ENST00000549995 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
PFDN5-208ENST00000549995 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
PFDN5-208ENST00000549995 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
PFDN5-208ENST00000549995 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
PFDN5-208ENST00000549995 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.96e-7■■■■■ 36.8
PFDN5-208ENST00000549995 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
PFDN5-208ENST00000549995 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
PFDN5-208ENST00000549995 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
PFDN5-208ENST00000549995 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
PFDN5-208ENST00000549995 CHD1O14646 1710 aa20.56■□□□□ 0.88
PFDN5-208ENST00000549995 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
PFDN5-208ENST00000549995 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
PFDN5-208ENST00000549995 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
PFDN5-208ENST00000549995 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
PFDN5-208ENST00000549995 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
PFDN5-208ENST00000549995 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
PFDN5-208ENST00000549995 CUL7Q14999 1698 aa20.41■□□□□ 0.86
PFDN5-208ENST00000549995 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
PFDN5-208ENST00000549995 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
PFDN5-208ENST00000549995 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
PFDN5-208ENST00000549995 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
PFDN5-208ENST00000549995 IGF1RP08069 1367 aa20.33■□□□□ 0.84
PFDN5-208ENST00000549995 NUP160Q12769 1436 aa20.3■□□□□ 0.84
PFDN5-208ENST00000549995 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
PFDN5-208ENST00000549995 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
PFDN5-208ENST00000549995 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
PFDN5-208ENST00000549995 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
PFDN5-208ENST00000549995 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
PFDN5-208ENST00000549995 FBLN2P98095 1184 aa20.2■□□□□ 0.82
PFDN5-208ENST00000549995 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
PFDN5-208ENST00000549995 EEA1Q15075 1411 aa20.19■□□□□ 0.82
PFDN5-208ENST00000549995 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
PFDN5-208ENST00000549995 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
PFDN5-208ENST00000549995 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
PFDN5-208ENST00000549995 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
PFDN5-208ENST00000549995 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
PFDN5-208ENST00000549995 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms