RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
BRF1-211ENST00000547530 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
BRF1-211ENST00000547530 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
BRF1-211ENST00000547530 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
BRF1-211ENST00000547530 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
BRF1-211ENST00000547530 XRCC6P12956 609 aaKnown RBP eCLIP19.26■□□□□ 0.672e-6■■□□□ 12.3
BRF1-211ENST00000547530 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
BRF1-211ENST00000547530 C1orf115Q9H7X2 142 aa19.26■□□□□ 0.67
BRF1-211ENST00000547530 KIF3BO15066 747 aa19.26■□□□□ 0.67
BRF1-211ENST00000547530 TRAK2O60296 914 aa19.25■□□□□ 0.67
BRF1-211ENST00000547530 MTHFSP49914 203 aa19.25■□□□□ 0.67
BRF1-211ENST00000547530 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
BRF1-211ENST00000547530 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
BRF1-211ENST00000547530 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
BRF1-211ENST00000547530 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
BRF1-211ENST00000547530 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
BRF1-211ENST00000547530 C22orf23Q9BZE7 217 aa19.24■□□□□ 0.67
BRF1-211ENST00000547530 SAMD9Q5K651 1589 aa19.23■□□□□ 0.67
BRF1-211ENST00000547530 RWDD1Q9H446 243 aaPredicted RBP19.23■□□□□ 0.67
BRF1-211ENST00000547530 CGNL1Q0VF96 1302 aa19.23■□□□□ 0.67
BRF1-211ENST00000547530 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
BRF1-211ENST00000547530 FOXD4L6Q3SYB3 417 aaPredicted RBP19.23■□□□□ 0.67
BRF1-211ENST00000547530 FOXD4L3Q6VB84 417 aaPredicted RBP19.23■□□□□ 0.67
BRF1-211ENST00000547530 FBLN1P23142 703 aa19.21■□□□□ 0.67
BRF1-211ENST00000547530 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
BRF1-211ENST00000547530 KDM5CP41229 1560 aa19.21■□□□□ 0.67
BRF1-211ENST00000547530 CARD14Q9BXL6 1004 aa19.21■□□□□ 0.67
BRF1-211ENST00000547530 USP19O94966 1318 aa19.2■□□□□ 0.66
BRF1-211ENST00000547530 MPNDQ8N594 471 aa19.2■□□□□ 0.66
BRF1-211ENST00000547530 MCM4P33991 863 aa19.19■□□□□ 0.66
BRF1-211ENST00000547530 GGT6Q6P531 493 aa19.19■□□□□ 0.66
BRF1-211ENST00000547530 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
BRF1-211ENST00000547530 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
BRF1-211ENST00000547530 WDR62O43379 1518 aa19.18■□□□□ 0.66
BRF1-211ENST00000547530 RARSP54136 660 aaKnown RBP19.18■□□□□ 0.66
BRF1-211ENST00000547530 HSP90AA2PQ14568 343 aaPredicted RBP19.18■□□□□ 0.66
BRF1-211ENST00000547530 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
BRF1-211ENST00000547530 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
BRF1-211ENST00000547530 EXOSC9Q06265 439 aaKnown RBP19.18■□□□□ 0.66
BRF1-211ENST00000547530 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
BRF1-211ENST00000547530 UBE2Q2Q8WVN8 375 aa19.17■□□□□ 0.66
BRF1-211ENST00000547530 NOL8Q76FK4 1167 aaKnown RBP19.16■□□□□ 0.66
BRF1-211ENST00000547530 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
BRF1-211ENST00000547530 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
BRF1-211ENST00000547530 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
BRF1-211ENST00000547530 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
BRF1-211ENST00000547530 KIF14Q15058 1648 aa19.14■□□□□ 0.65
BRF1-211ENST00000547530 RBM10P98175 930 aaKnown RBP19.14■□□□□ 0.65
BRF1-211ENST00000547530 DZIP1LQ8IYY4 767 aaKnown RBP19.14■□□□□ 0.65
BRF1-211ENST00000547530 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
BRF1-211ENST00000547530 DNMT1P26358 1616 aaKnown RBP19.14■□□□□ 0.65
BRF1-211ENST00000547530 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
BRF1-211ENST00000547530 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
BRF1-211ENST00000547530 CABP2Q9NPB3 220 aa19.13■□□□□ 0.65
BRF1-211ENST00000547530 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
BRF1-211ENST00000547530 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
BRF1-211ENST00000547530 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
BRF1-211ENST00000547530 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
BRF1-211ENST00000547530 SOX12O15370 315 aa19.12■□□□□ 0.65
BRF1-211ENST00000547530 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
BRF1-211ENST00000547530 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
BRF1-211ENST00000547530 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
BRF1-211ENST00000547530 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
BRF1-211ENST00000547530 NOB1Q9ULX3 412 aaKnown RBP19.11■□□□□ 0.65
BRF1-211ENST00000547530 CHMP5Q9NZZ3 219 aa19.1■□□□□ 0.65
BRF1-211ENST00000547530 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
BRF1-211ENST00000547530 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
BRF1-211ENST00000547530 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
BRF1-211ENST00000547530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.65
BRF1-211ENST00000547530 PTPRGP23470 1445 aa19.08■□□□□ 0.65
BRF1-211ENST00000547530 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.65
BRF1-211ENST00000547530 SPAG9O60271 1321 aaKnown RBP19.07■□□□□ 0.64
BRF1-211ENST00000547530 A2MP01023 1474 aa19.07■□□□□ 0.64
BRF1-211ENST00000547530 ANP32BQ92688 251 aaKnown RBP19.07■□□□□ 0.64
BRF1-211ENST00000547530 GRPEL1Q9HAV7 217 aa19.07■□□□□ 0.64
BRF1-211ENST00000547530 CHAMP1Q96JM3 812 aa19.07■□□□□ 0.64
BRF1-211ENST00000547530 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
BRF1-211ENST00000547530 HMOX1P09601 288 aa19.06■□□□□ 0.64
BRF1-211ENST00000547530 TMEM57Q8N5G2 664 aa19.06■□□□□ 0.64
BRF1-211ENST00000547530 SSH1Q8WYL5 1049 aa19.06■□□□□ 0.64
BRF1-211ENST00000547530 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
BRF1-211ENST00000547530 PLEKHG5O94827 1062 aa19.05■□□□□ 0.64
BRF1-211ENST00000547530 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
BRF1-211ENST00000547530 RIPK4P57078 832 aa19.04■□□□□ 0.64
BRF1-211ENST00000547530 MVPQ14764 893 aaKnown RBP19.04■□□□□ 0.64
BRF1-211ENST00000547530 TRIM27P14373 513 aa19.04■□□□□ 0.64
BRF1-211ENST00000547530 PKNOX2Q96KN3 472 aa19.03■□□□□ 0.64
BRF1-211ENST00000547530 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
BRF1-211ENST00000547530 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
BRF1-211ENST00000547530 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
BRF1-211ENST00000547530 TNPO1Q92973 898 aaKnown RBP19.02■□□□□ 0.64
BRF1-211ENST00000547530 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
BRF1-211ENST00000547530 ANTXR1Q9H6X2 564 aa19.02■□□□□ 0.64
BRF1-211ENST00000547530 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.64
BRF1-211ENST00000547530 ESPNB1AK53 854 aa19.02■□□□□ 0.63
BRF1-211ENST00000547530 PLCB2Q00722 1185 aa19.02■□□□□ 0.63
BRF1-211ENST00000547530 ZMYND15Q9H091 742 aa19.02■□□□□ 0.63
BRF1-211ENST00000547530 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.63
BRF1-211ENST00000547530 GAS2L3Q86XJ1 694 aa19.01■□□□□ 0.63
BRF1-211ENST00000547530 FAM135AQ9P2D6 1515 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms