RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 PARD3Q8TEW0 1356 aa24.51■■□□□ 1.51
TNFAIP1-202ENST00000544907 IQGAP1P46940 1657 aa24.5■■□□□ 1.51
TNFAIP1-202ENST00000544907 TMF1P82094 1093 aa24.5■■□□□ 1.51
TNFAIP1-202ENST00000544907 MYOM2P54296 1465 aa24.49■■□□□ 1.51
TNFAIP1-202ENST00000544907 KIF3BO15066 747 aa24.49■■□□□ 1.51
TNFAIP1-202ENST00000544907 INSRP06213 1382 aa24.49■■□□□ 1.51
TNFAIP1-202ENST00000544907 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
TNFAIP1-202ENST00000544907 SLC24A1O60721 1099 aa24.47■■□□□ 1.51
TNFAIP1-202ENST00000544907 SMG6Q86US8 1419 aaKnown RBP24.47■■□□□ 1.51
TNFAIP1-202ENST00000544907 SCAF11Q99590 1463 aaKnown RBP24.47■■□□□ 1.51
TNFAIP1-202ENST00000544907 TMC1Q8TDI8 760 aa24.46■■□□□ 1.51
TNFAIP1-202ENST00000544907 DISP3Q9P2K9 1392 aa24.44■■□□□ 1.5
TNFAIP1-202ENST00000544907 MLECQ14165 292 aa24.44■■□□□ 1.5
TNFAIP1-202ENST00000544907 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
TNFAIP1-202ENST00000544907 NLRP13Q86W25 1043 aa24.43■■□□□ 1.5
TNFAIP1-202ENST00000544907 EIF3AQ14152 1382 aaKnown RBP24.41■■□□□ 1.5
TNFAIP1-202ENST00000544907 GGT6Q6P531 493 aa24.4■■□□□ 1.5
TNFAIP1-202ENST00000544907 TSHZ2Q9NRE2 1034 aa24.4■■□□□ 1.5
TNFAIP1-202ENST00000544907 BCANQ96GW7 911 aa24.4■■□□□ 1.5
TNFAIP1-202ENST00000544907 FER1L4A9Z1Z3 1794 aa24.39■■□□□ 1.5
TNFAIP1-202ENST00000544907 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
TNFAIP1-202ENST00000544907 ADAMTSL3P82987 1691 aa24.38■■□□□ 1.49
TNFAIP1-202ENST00000544907 KIF1BO60333 1816 aa24.36■■□□□ 1.49
TNFAIP1-202ENST00000544907 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
TNFAIP1-202ENST00000544907 IFT172Q9UG01 1749 aa24.35■■□□□ 1.49
TNFAIP1-202ENST00000544907 SYNMO15061 1565 aa24.35■■□□□ 1.49
TNFAIP1-202ENST00000544907 ADGRB3O60242 1522 aa24.34■■□□□ 1.49
TNFAIP1-202ENST00000544907 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
TNFAIP1-202ENST00000544907 RNF123Q5XPI4 1314 aa24.33■■□□□ 1.49
TNFAIP1-202ENST00000544907 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
TNFAIP1-202ENST00000544907 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
TNFAIP1-202ENST00000544907 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
TNFAIP1-202ENST00000544907 CLTCQ00610 1675 aaKnown RBP24.31■■□□□ 1.48
TNFAIP1-202ENST00000544907 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
TNFAIP1-202ENST00000544907 NPC1L1Q9UHC9 1359 aa24.31■■□□□ 1.48
TNFAIP1-202ENST00000544907 PANK3Q9H999 370 aa24.3■■□□□ 1.48
TNFAIP1-202ENST00000544907 SETBP1Q9Y6X0 1596 aa24.29■■□□□ 1.48
TNFAIP1-202ENST00000544907 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
TNFAIP1-202ENST00000544907 NPATQ14207 1427 aa24.28■■□□□ 1.48
TNFAIP1-202ENST00000544907 ABCC3O15438 1527 aa24.28■■□□□ 1.48
TNFAIP1-202ENST00000544907 MROH2AA6NES4 1674 aa24.27■■□□□ 1.48
TNFAIP1-202ENST00000544907 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
TNFAIP1-202ENST00000544907 PDE3BQ13370 1112 aa24.26■■□□□ 1.47
TNFAIP1-202ENST00000544907 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
TNFAIP1-202ENST00000544907 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
TNFAIP1-202ENST00000544907 KDM4FA0A1W2PPD8 638 aa24.25■■□□□ 1.47
TNFAIP1-202ENST00000544907 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
TNFAIP1-202ENST00000544907 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
TNFAIP1-202ENST00000544907 NOS1P29475 1434 aa24.23■■□□□ 1.47
TNFAIP1-202ENST00000544907 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
TNFAIP1-202ENST00000544907 C3P01024 1663 aa24.2■■□□□ 1.46
TNFAIP1-202ENST00000544907 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
TNFAIP1-202ENST00000544907 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
TNFAIP1-202ENST00000544907 KNSTRNQ9Y448 316 aa24.2■■□□□ 1.46
TNFAIP1-202ENST00000544907 ASXL1Q8IXJ9 1541 aa24.2■■□□□ 1.46
TNFAIP1-202ENST00000544907 PTPRMP28827 1452 aa24.19■■□□□ 1.46
TNFAIP1-202ENST00000544907 ADGRF5Q8IZF2 1346 aa24.19■■□□□ 1.46
TNFAIP1-202ENST00000544907 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
TNFAIP1-202ENST00000544907 ZMYM3Q14202 1370 aa24.17■■□□□ 1.46
TNFAIP1-202ENST00000544907 MYOM1P52179 1685 aa24.17■■□□□ 1.46
TNFAIP1-202ENST00000544907 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
TNFAIP1-202ENST00000544907 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
TNFAIP1-202ENST00000544907 PPLO60437 1756 aa24.16■■□□□ 1.46
TNFAIP1-202ENST00000544907 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
TNFAIP1-202ENST00000544907 CC2D1BQ5T0F9 858 aaKnown RBP24.15■■□□□ 1.46
TNFAIP1-202ENST00000544907 ERVK-7P63135 1459 aa24.15■■□□□ 1.46
TNFAIP1-202ENST00000544907 C14orf93Q9H972 538 aaKnown RBP24.14■■□□□ 1.45
TNFAIP1-202ENST00000544907 IRX6P78412 446 aaPredicted RBP24.13■■□□□ 1.45
TNFAIP1-202ENST00000544907 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
TNFAIP1-202ENST00000544907 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
TNFAIP1-202ENST00000544907 ADGRB1O14514 1584 aa24.11■■□□□ 1.45
TNFAIP1-202ENST00000544907 ZFYVE9O95405 1425 aa24.09■■□□□ 1.45
TNFAIP1-202ENST00000544907 PREX1Q8TCU6 1659 aa24.09■■□□□ 1.45
TNFAIP1-202ENST00000544907 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.45
TNFAIP1-202ENST00000544907 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.45
TNFAIP1-202ENST00000544907 PPP2R1AP30153 589 aa24.08■■□□□ 1.44
TNFAIP1-202ENST00000544907 CENPJQ9HC77 1338 aaPredicted RBP24.06■■□□□ 1.44
TNFAIP1-202ENST00000544907 SLC52A1Q9NWF4 448 aa24.05■■□□□ 1.44
TNFAIP1-202ENST00000544907 SPATA31D1Q6ZQQ2 1576 aa24.05■■□□□ 1.44
TNFAIP1-202ENST00000544907 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
TNFAIP1-202ENST00000544907 MYT1Q01538 1121 aa24.03■■□□□ 1.44
TNFAIP1-202ENST00000544907 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
TNFAIP1-202ENST00000544907 RBM19Q9Y4C8 960 aaKnown RBP24.03■■□□□ 1.44
TNFAIP1-202ENST00000544907 NEXMIFQ5QGS0 1516 aa24.02■■□□□ 1.44
TNFAIP1-202ENST00000544907 TNRQ92752 1358 aa24■■□□□ 1.43
TNFAIP1-202ENST00000544907 SETD1BQ9UPS6 1966 aaKnown RBP23.99■■□□□ 1.43
TNFAIP1-202ENST00000544907 CHGAP10645 457 aaKnown RBP23.99■■□□□ 1.43
TNFAIP1-202ENST00000544907 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
TNFAIP1-202ENST00000544907 RRP1P56182 461 aaKnown RBP23.97■■□□□ 1.43
TNFAIP1-202ENST00000544907 WDR43Q15061 677 aaKnown RBP eCLIP23.97■■□□□ 1.43
TNFAIP1-202ENST00000544907 NGEFQ8N5V2 710 aa23.97■■□□□ 1.43
TNFAIP1-202ENST00000544907 QRICH2Q9H0J4 1663 aa23.96■■□□□ 1.43
TNFAIP1-202ENST00000544907 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
TNFAIP1-202ENST00000544907 ADAMTS8Q9UP79 889 aa23.95■■□□□ 1.42
TNFAIP1-202ENST00000544907 B4GALNT3Q6L9W6 998 aa23.94■■□□□ 1.42
TNFAIP1-202ENST00000544907 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
TNFAIP1-202ENST00000544907 NLRP1Q9C000 1473 aa23.92■■□□□ 1.42
TNFAIP1-202ENST00000544907 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
TNFAIP1-202ENST00000544907 ZNF142P52746 1687 aaPredicted RBP23.91■■□□□ 1.42
TNFAIP1-202ENST00000544907 IDI1Q13907 227 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms