RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
KLHL42-204ENST00000543254 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
KLHL42-204ENST00000543254 POLR1AO95602 1720 aaPredicted RBP18.39■□□□□ 0.53
KLHL42-204ENST00000543254 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
KLHL42-204ENST00000543254 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
KLHL42-204ENST00000543254 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
KLHL42-204ENST00000543254 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
KLHL42-204ENST00000543254 ZNF335Q9H4Z2 1342 aaPredicted RBP18.37■□□□□ 0.53
KLHL42-204ENST00000543254 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
KLHL42-204ENST00000543254 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
KLHL42-204ENST00000543254 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
KLHL42-204ENST00000543254 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
KLHL42-204ENST00000543254 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
KLHL42-204ENST00000543254 IQGAP1P46940 1657 aa18.34■□□□□ 0.53
KLHL42-204ENST00000543254 KIF1BO60333 1816 aa18.31■□□□□ 0.52
KLHL42-204ENST00000543254 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
KLHL42-204ENST00000543254 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
KLHL42-204ENST00000543254 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
KLHL42-204ENST00000543254 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
KLHL42-204ENST00000543254 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
KLHL42-204ENST00000543254 KCNA6P17658 529 aa18.26■□□□□ 0.51
KLHL42-204ENST00000543254 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
KLHL42-204ENST00000543254 CPS1P31327 1500 aa18.24■□□□□ 0.51
KLHL42-204ENST00000543254 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
KLHL42-204ENST00000543254 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
KLHL42-204ENST00000543254 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
KLHL42-204ENST00000543254 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
KLHL42-204ENST00000543254 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
KLHL42-204ENST00000543254 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
KLHL42-204ENST00000543254 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
KLHL42-204ENST00000543254 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
KLHL42-204ENST00000543254 PIK3R4Q99570 1358 aa18.2■□□□□ 0.5
KLHL42-204ENST00000543254 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
KLHL42-204ENST00000543254 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
KLHL42-204ENST00000543254 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
KLHL42-204ENST00000543254 SIN3AQ96ST3 1273 aa18.17■□□□□ 0.5
KLHL42-204ENST00000543254 IQSEC2Q5JU85 1478 aa18.16■□□□□ 0.5
KLHL42-204ENST00000543254 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
KLHL42-204ENST00000543254 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
KLHL42-204ENST00000543254 METP08581 1390 aa18.16■□□□□ 0.5
KLHL42-204ENST00000543254 PPLO60437 1756 aa18.15■□□□□ 0.5
KLHL42-204ENST00000543254 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
KLHL42-204ENST00000543254 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.5
KLHL42-204ENST00000543254 MYOM2P54296 1465 aa18.14■□□□□ 0.5
KLHL42-204ENST00000543254 LRRC7Q96NW7 1537 aa18.14■□□□□ 0.49
KLHL42-204ENST00000543254 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
KLHL42-204ENST00000543254 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
KLHL42-204ENST00000543254 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
KLHL42-204ENST00000543254 TOM1O60784 492 aa18.12■□□□□ 0.49
KLHL42-204ENST00000543254 ALKQ9UM73 1620 aa18.12■□□□□ 0.49
KLHL42-204ENST00000543254 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
KLHL42-204ENST00000543254 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
KLHL42-204ENST00000543254 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
KLHL42-204ENST00000543254 STK26Q9P289 416 aa18.11■□□□□ 0.49
KLHL42-204ENST00000543254 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
KLHL42-204ENST00000543254 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
KLHL42-204ENST00000543254 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
KLHL42-204ENST00000543254 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
KLHL42-204ENST00000543254 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
KLHL42-204ENST00000543254 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
KLHL42-204ENST00000543254 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
KLHL42-204ENST00000543254 NRXN1Q9ULB1 1477 aa18.08■□□□□ 0.49
KLHL42-204ENST00000543254 MSH6P52701 1360 aa18.08■□□□□ 0.49
KLHL42-204ENST00000543254 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
KLHL42-204ENST00000543254 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
KLHL42-204ENST00000543254 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
KLHL42-204ENST00000543254 ILDR1Q86SU0 546 aaPredicted RBP18.06■□□□□ 0.48
KLHL42-204ENST00000543254 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
KLHL42-204ENST00000543254 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
KLHL42-204ENST00000543254 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
KLHL42-204ENST00000543254 ATF3P18847 181 aa18.04■□□□□ 0.48
KLHL42-204ENST00000543254 CLSPNQ9HAW4 1339 aa18.03■□□□□ 0.48
KLHL42-204ENST00000543254 C19orf44Q9H6X5 657 aa18.03■□□□□ 0.48
KLHL42-204ENST00000543254 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
KLHL42-204ENST00000543254 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
KLHL42-204ENST00000543254 YTHDC2Q9H6S0 1430 aaKnown RBP18.02■□□□□ 0.48
KLHL42-204ENST00000543254 ABCC11Q96J66 1382 aa18.02■□□□□ 0.47
KLHL42-204ENST00000543254 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
KLHL42-204ENST00000543254 LAMC1P11047 1609 aa18.01■□□□□ 0.47
KLHL42-204ENST00000543254 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
KLHL42-204ENST00000543254 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
KLHL42-204ENST00000543254 POGKQ9P215 609 aa18■□□□□ 0.47
KLHL42-204ENST00000543254 TRAK1Q9UPV9 953 aa17.99■□□□□ 0.47
KLHL42-204ENST00000543254 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
KLHL42-204ENST00000543254 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
KLHL42-204ENST00000543254 SLAIN2Q9P270 581 aa17.97■□□□□ 0.47
KLHL42-204ENST00000543254 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
KLHL42-204ENST00000543254 TECPR2O15040 1411 aa17.97■□□□□ 0.47
KLHL42-204ENST00000543254 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
KLHL42-204ENST00000543254 PRAM1Q96QH2 718 aa17.96■□□□□ 0.47
KLHL42-204ENST00000543254 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
KLHL42-204ENST00000543254 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
KLHL42-204ENST00000543254 FAM135BQ49AJ0 1406 aa17.94■□□□□ 0.46
KLHL42-204ENST00000543254 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
KLHL42-204ENST00000543254 ADGRB1O14514 1584 aa17.93■□□□□ 0.46
KLHL42-204ENST00000543254 DCCP43146 1447 aa17.93■□□□□ 0.46
KLHL42-204ENST00000543254 NBPF1Q3BBV0 1214 aa17.93■□□□□ 0.46
KLHL42-204ENST00000543254 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
KLHL42-204ENST00000543254 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
KLHL42-204ENST00000543254 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms