RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CYB561A3-214ENST00000540139 RPGRIP1LQ68CZ1 1315 aa17.2■□□□□ 0.34
CYB561A3-214ENST00000540139 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
CYB561A3-214ENST00000540139 UGGT1Q9NYU2 1555 aa17.19■□□□□ 0.34
CYB561A3-214ENST00000540139 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
CYB561A3-214ENST00000540139 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
CYB561A3-214ENST00000540139 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CYB561A3-214ENST00000540139 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
CYB561A3-214ENST00000540139 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
CYB561A3-214ENST00000540139 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
CYB561A3-214ENST00000540139 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
CYB561A3-214ENST00000540139 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
CYB561A3-214ENST00000540139 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
CYB561A3-214ENST00000540139 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.16■□□□□ 0.34
CYB561A3-214ENST00000540139 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-214ENST00000540139 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
CYB561A3-214ENST00000540139 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
CYB561A3-214ENST00000540139 SLIT1O75093 1534 aa17.15■□□□□ 0.34
CYB561A3-214ENST00000540139 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
CYB561A3-214ENST00000540139 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
CYB561A3-214ENST00000540139 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
CYB561A3-214ENST00000540139 KIF1BO60333 1816 aa17.13■□□□□ 0.33
CYB561A3-214ENST00000540139 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
CYB561A3-214ENST00000540139 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
CYB561A3-214ENST00000540139 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
CYB561A3-214ENST00000540139 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
CYB561A3-214ENST00000540139 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-214ENST00000540139 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-214ENST00000540139 RGL3Q3MIN7 710 aa17.1■□□□□ 0.33
CYB561A3-214ENST00000540139 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
CYB561A3-214ENST00000540139 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
CYB561A3-214ENST00000540139 HSPA2P54652 639 aa17.09■□□□□ 0.33
CYB561A3-214ENST00000540139 MSH5O43196 834 aa17.08■□□□□ 0.32
CYB561A3-214ENST00000540139 LTKP29376 864 aa17.08■□□□□ 0.32
CYB561A3-214ENST00000540139 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
CYB561A3-214ENST00000540139 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
CYB561A3-214ENST00000540139 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
CYB561A3-214ENST00000540139 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
CYB561A3-214ENST00000540139 MED14O60244 1454 aa17.06■□□□□ 0.32
CYB561A3-214ENST00000540139 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
CYB561A3-214ENST00000540139 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
CYB561A3-214ENST00000540139 PLEKHG1Q9ULL1 1385 aa17.04■□□□□ 0.32
CYB561A3-214ENST00000540139 PPP1R15AO75807 674 aaPredicted RBP17.04■□□□□ 0.32
CYB561A3-214ENST00000540139 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
CYB561A3-214ENST00000540139 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
CYB561A3-214ENST00000540139 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
CYB561A3-214ENST00000540139 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
CYB561A3-214ENST00000540139 MYOM2P54296 1465 aa17.02■□□□□ 0.32
CYB561A3-214ENST00000540139 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
CYB561A3-214ENST00000540139 NRXN1Q9ULB1 1477 aa17■□□□□ 0.31
CYB561A3-214ENST00000540139 TBX22Q9Y458 520 aa17■□□□□ 0.31
CYB561A3-214ENST00000540139 PPLO60437 1756 aa17■□□□□ 0.31
CYB561A3-214ENST00000540139 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
CYB561A3-214ENST00000540139 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
CYB561A3-214ENST00000540139 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
CYB561A3-214ENST00000540139 IFT172Q9UG01 1749 aa16.97■□□□□ 0.31
CYB561A3-214ENST00000540139 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
CYB561A3-214ENST00000540139 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
CYB561A3-214ENST00000540139 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
CYB561A3-214ENST00000540139 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
CYB561A3-214ENST00000540139 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.3
CYB561A3-214ENST00000540139 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
CYB561A3-214ENST00000540139 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
CYB561A3-214ENST00000540139 ADAMTS13Q76LX8 1427 aa16.95■□□□□ 0.3
CYB561A3-214ENST00000540139 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
CYB561A3-214ENST00000540139 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
CYB561A3-214ENST00000540139 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
CYB561A3-214ENST00000540139 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
CYB561A3-214ENST00000540139 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
CYB561A3-214ENST00000540139 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
CYB561A3-214ENST00000540139 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
CYB561A3-214ENST00000540139 KCNA6P17658 529 aa16.88■□□□□ 0.29
CYB561A3-214ENST00000540139 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
CYB561A3-214ENST00000540139 LAMC1P11047 1609 aa16.86■□□□□ 0.29
CYB561A3-214ENST00000540139 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
CYB561A3-214ENST00000540139 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
CYB561A3-214ENST00000540139 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
CYB561A3-214ENST00000540139 METP08581 1390 aa16.86■□□□□ 0.29
CYB561A3-214ENST00000540139 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
CYB561A3-214ENST00000540139 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
CYB561A3-214ENST00000540139 GPRASP1Q5JY77 1395 aa16.84■□□□□ 0.29
CYB561A3-214ENST00000540139 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
CYB561A3-214ENST00000540139 AMOTL2Q9Y2J4 779 aa16.82■□□□□ 0.28
CYB561A3-214ENST00000540139 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
CYB561A3-214ENST00000540139 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
CYB561A3-214ENST00000540139 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
CYB561A3-214ENST00000540139 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
CYB561A3-214ENST00000540139 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
CYB561A3-214ENST00000540139 TECPR2O15040 1411 aa16.8■□□□□ 0.28
CYB561A3-214ENST00000540139 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
CYB561A3-214ENST00000540139 TMEM132EQ6IEE7 984 aa16.8■□□□□ 0.28
CYB561A3-214ENST00000540139 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
CYB561A3-214ENST00000540139 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
CYB561A3-214ENST00000540139 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
CYB561A3-214ENST00000540139 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms