RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 SENP3Q9H4L4 574 aaPredicted RBP34.16■■■■□ 3.06
CLTA-210ENST00000540080 ZFYVE9O95405 1425 aa34.15■■■■□ 3.06
CLTA-210ENST00000540080 PPP1R15AO75807 674 aaPredicted RBP34.15■■■■□ 3.06
CLTA-210ENST00000540080 NUTM2DQ5VT03 806 aaPredicted RBP34.15■■■■□ 3.06
CLTA-210ENST00000540080 HRCP23327 699 aa34.13■■■■□ 3.05
CLTA-210ENST00000540080 ZNF326Q5BKZ1 582 aaKnown RBP34.13■■■■□ 3.05
CLTA-210ENST00000540080 BCANQ96GW7 911 aa34.13■■■■□ 3.05
CLTA-210ENST00000540080 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.11■■■■□ 3.05
CLTA-210ENST00000540080 SLC26A8Q96RN1 970 aa34.08■■■■□ 3.05
CLTA-210ENST00000540080 PLEKHG1Q9ULL1 1385 aa34.04■■■■□ 3.04
CLTA-210ENST00000540080 KIF1BO60333 1816 aa34.04■■■■□ 3.04
CLTA-210ENST00000540080 CCDC144AA2RUR9 1427 aa34.03■■■■□ 3.04
CLTA-210ENST00000540080 ILDR1Q86SU0 546 aaPredicted RBP34.02■■■■□ 3.04
CLTA-210ENST00000540080 FBXO41Q8TF61 875 aa34■■■■□ 3.03
CLTA-210ENST00000540080 TRIM26Q12899 539 aaPredicted RBP33.97■■■■□ 3.03
CLTA-210ENST00000540080 CPS1P31327 1500 aa33.96■■■■□ 3.03
CLTA-210ENST00000540080 NEXMIFQ5QGS0 1516 aa33.93■■■■□ 3.02
CLTA-210ENST00000540080 STRCP1A6NGW2 1772 aa33.93■■■■□ 3.02
CLTA-210ENST00000540080 RGL3Q3MIN7 710 aa33.92■■■■□ 3.02
CLTA-210ENST00000540080 TBX22Q9Y458 520 aa33.9■■■■□ 3.02
CLTA-210ENST00000540080 IQSEC2Q5JU85 1478 aa33.89■■■■□ 3.02
CLTA-210ENST00000540080 RPGRIP1LQ68CZ1 1315 aa33.89■■■■□ 3.02
CLTA-210ENST00000540080 ADAMTS13Q76LX8 1427 aa33.88■■■■□ 3.01
CLTA-210ENST00000540080 KCNA6P17658 529 aa33.88■■■■□ 3.01
CLTA-210ENST00000540080 ANKRD30BQ9BXX2 1392 aa33.87■■■■□ 3.01
CLTA-210ENST00000540080 VGFO15240 615 aaPredicted RBP33.86■■■■□ 3.01
CLTA-210ENST00000540080 SPATA31E1Q6ZUB1 1445 aa33.86■■■■□ 3.01
CLTA-210ENST00000540080 LRRC7Q96NW7 1537 aa33.84■■■■□ 3.01
CLTA-210ENST00000540080 DIP2AQ14689 1571 aa33.8■■■■□ 3
CLTA-210ENST00000540080 SETBP1Q9Y6X0 1596 aa33.8■■■■□ 3
CLTA-210ENST00000540080 NRXN3Q9Y4C0 1643 aa33.79■■■■□ 3
CLTA-210ENST00000540080 UBAP1LF5GYI3 381 aa33.78■■■■□ 3
CLTA-210ENST00000540080 PPLO60437 1756 aa33.77■■■■□ 3
CLTA-210ENST00000540080 PROSER2Q86WR7 435 aaPredicted RBP33.77■■■■□ 3
CLTA-210ENST00000540080 RBM33Q96EV2 1170 aaKnown RBP33.75■■■□□ 2.99
CLTA-210ENST00000540080 NWD1Q149M9 1564 aa33.74■■■□□ 2.99
CLTA-210ENST00000540080 CHD2O14647 1828 aaKnown RBP33.74■■■□□ 2.99
CLTA-210ENST00000540080 PIK3R4Q99570 1358 aa33.73■■■□□ 2.99
CLTA-210ENST00000540080 ADGRF5Q8IZF2 1346 aa33.73■■■□□ 2.99
CLTA-210ENST00000540080 METP08581 1390 aa33.72■■■□□ 2.99
CLTA-210ENST00000540080 AMOTL2Q9Y2J4 779 aa33.71■■■□□ 2.99
CLTA-210ENST00000540080 TMEM94Q12767 1356 aa33.71■■■□□ 2.99
CLTA-210ENST00000540080 NKTRP30414 1462 aaKnown RBP33.69■■■□□ 2.98
CLTA-210ENST00000540080 PTPRUQ92729 1446 aa33.69■■■□□ 2.98
CLTA-210ENST00000540080 TOM1O60784 492 aa33.67■■■□□ 2.98
CLTA-210ENST00000540080 IFT172Q9UG01 1749 aa33.66■■■□□ 2.98
CLTA-210ENST00000540080 XIRP1Q702N8 1843 aaKnown RBP33.65■■■□□ 2.98
CLTA-210ENST00000540080 ALKQ9UM73 1620 aa33.64■■■□□ 2.98
CLTA-210ENST00000540080 PIP4K2BP78356 416 aa33.62■■■□□ 2.97
CLTA-210ENST00000540080 SCAF1Q9H7N4 1312 aaKnown RBP33.61■■■□□ 2.97
CLTA-210ENST00000540080 DCAF11Q8TEB1 546 aa33.58■■■□□ 2.97
CLTA-210ENST00000540080 KDM2AQ9Y2K7 1162 aa33.58■■■□□ 2.97
CLTA-210ENST00000540080 SETD1AO15047 1707 aaKnown RBP33.56■■■□□ 2.96
CLTA-210ENST00000540080 C14orf37Q86TY3 774 aa33.56■■■□□ 2.96
CLTA-210ENST00000540080 DHX57Q6P158 1386 aaKnown RBP33.56■■■□□ 2.96
CLTA-210ENST00000540080 PIK3C2GO75747 1445 aa33.55■■■□□ 2.96
CLTA-210ENST00000540080 XRN1Q8IZH2 1706 aaKnown RBP33.55■■■□□ 2.96
CLTA-210ENST00000540080 MYOM2P54296 1465 aa33.54■■■□□ 2.96
CLTA-210ENST00000540080 MSH6P52701 1360 aa33.52■■■□□ 2.96
CLTA-210ENST00000540080 TMEM132EQ6IEE7 984 aa33.5■■■□□ 2.95
CLTA-210ENST00000540080 SIN3AQ96ST3 1273 aa33.5■■■□□ 2.95
CLTA-210ENST00000540080 PCGF6Q9BYE7 350 aa33.5■■■□□ 2.95
CLTA-210ENST00000540080 NRXN1Q9ULB1 1477 aa33.5■■■□□ 2.95
CLTA-210ENST00000540080 NCOA3Q9Y6Q9 1424 aa33.49■■■□□ 2.95
CLTA-210ENST00000540080 CFAP70Q5T0N1 1121 aa33.48■■■□□ 2.95
CLTA-210ENST00000540080 C14orf93Q9H972 538 aaKnown RBP33.48■■■□□ 2.95
CLTA-210ENST00000540080 STK26Q9P289 416 aa33.46■■■□□ 2.95
CLTA-210ENST00000540080 NEUROD1Q13562 356 aa33.45■■■□□ 2.95
CLTA-210ENST00000540080 C19orf44Q9H6X5 657 aa33.45■■■□□ 2.95
CLTA-210ENST00000540080 STAC3Q96MF2 364 aa33.44■■■□□ 2.94
CLTA-210ENST00000540080 ROBO2Q9HCK4 1378 aa33.43■■■□□ 2.94
CLTA-210ENST00000540080 ASXL1Q8IXJ9 1541 aa33.4■■■□□ 2.94
CLTA-210ENST00000540080 PTCH1Q13635 1447 aa33.4■■■□□ 2.94
CLTA-210ENST00000540080 LRPPRCP42704 1394 aaKnown RBP33.39■■■□□ 2.94
CLTA-210ENST00000540080 ATF3P18847 181 aa33.39■■■□□ 2.94
CLTA-210ENST00000540080 SLAIN2Q9P270 581 aa33.38■■■□□ 2.93
CLTA-210ENST00000540080 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.36■■■□□ 2.93
CLTA-210ENST00000540080 HSPA1LP34931 641 aa33.36■■■□□ 2.93
CLTA-210ENST00000540080 CADPS2Q86UW7 1296 aa33.36■■■□□ 2.93
CLTA-210ENST00000540080 PRAG1Q86YV5 1406 aa33.36■■■□□ 2.93
CLTA-210ENST00000540080 YTHDC2Q9H6S0 1430 aaKnown RBP33.36■■■□□ 2.93
CLTA-210ENST00000540080 LAMC1P11047 1609 aa33.35■■■□□ 2.93
CLTA-210ENST00000540080 ABCC11Q96J66 1382 aa33.34■■■□□ 2.93
CLTA-210ENST00000540080 L3MBTL2Q969R5 705 aa33.33■■■□□ 2.93
CLTA-210ENST00000540080 WAPLQ7Z5K2 1190 aa33.32■■■□□ 2.92
CLTA-210ENST00000540080 ADGRL3Q9HAR2 1447 aa33.32■■■□□ 2.92
CLTA-210ENST00000540080 TECPR2O15040 1411 aa33.3■■■□□ 2.92
CLTA-210ENST00000540080 FAM135BQ49AJ0 1406 aa33.3■■■□□ 2.92
CLTA-210ENST00000540080 NALCNQ8IZF0 1738 aa33.28■■■□□ 2.92
CLTA-210ENST00000540080 DCCP43146 1447 aa33.27■■■□□ 2.92
CLTA-210ENST00000540080 PLEKHH1Q9ULM0 1364 aa33.25■■■□□ 2.91
CLTA-210ENST00000540080 KNDC1Q76NI1 1749 aa33.25■■■□□ 2.91
CLTA-210ENST00000540080 ROBO1Q9Y6N7 1651 aa33.24■■■□□ 2.91
CLTA-210ENST00000540080 ADGRB1O14514 1584 aa33.24■■■□□ 2.91
CLTA-210ENST00000540080 SIRT1Q96EB6 747 aa33.23■■■□□ 2.91
CLTA-210ENST00000540080 TRAK1Q9UPV9 953 aa33.22■■■□□ 2.91
CLTA-210ENST00000540080 PRAM1Q96QH2 718 aa33.19■■■□□ 2.9
CLTA-210ENST00000540080 MST1RQ04912 1400 aa33.19■■■□□ 2.9
CLTA-210ENST00000540080 SAFB2Q14151 953 aaKnown RBP eCLIP33.18■■■□□ 2.9
CLTA-210ENST00000540080 POGKQ9P215 609 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms