RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
COPS7A-210ENST00000539735 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
COPS7A-210ENST00000539735 ANKLE2Q86XL3 938 aa25.4■■□□□ 1.66
COPS7A-210ENST00000539735 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
COPS7A-210ENST00000539735 TRPM2O94759 1503 aa25.39■■□□□ 1.66
COPS7A-210ENST00000539735 SPHKAPQ2M3C7 1700 aa25.39■■□□□ 1.65
COPS7A-210ENST00000539735 WASHC2AQ641Q2 1341 aa25.37■■□□□ 1.65
COPS7A-210ENST00000539735 EID1Q9Y6B2 187 aa25.36■■□□□ 1.65
COPS7A-210ENST00000539735 TMEM2Q9UHN6 1383 aa25.36■■□□□ 1.65
COPS7A-210ENST00000539735 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
COPS7A-210ENST00000539735 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
COPS7A-210ENST00000539735 ADGRB3O60242 1522 aa25.35■■□□□ 1.65
COPS7A-210ENST00000539735 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
COPS7A-210ENST00000539735 SUPT16HQ9Y5B9 1047 aaKnown RBP25.34■■□□□ 1.65
COPS7A-210ENST00000539735 DCAF11Q8TEB1 546 aa25.33■■□□□ 1.65
COPS7A-210ENST00000539735 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
COPS7A-210ENST00000539735 LTKP29376 864 aa25.33■■□□□ 1.64
COPS7A-210ENST00000539735 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
COPS7A-210ENST00000539735 HDGFP51858 240 aaKnown RBP25.3■■□□□ 1.64
COPS7A-210ENST00000539735 SPATA31E1Q6ZUB1 1445 aa25.3■■□□□ 1.64
COPS7A-210ENST00000539735 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
COPS7A-210ENST00000539735 SLIT1O75093 1534 aa25.29■■□□□ 1.64
COPS7A-210ENST00000539735 ARHGAP23Q9P227 1491 aa25.29■■□□□ 1.64
COPS7A-210ENST00000539735 RGL3Q3MIN7 710 aa25.28■■□□□ 1.64
COPS7A-210ENST00000539735 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
COPS7A-210ENST00000539735 STRCQ7RTU9 1775 aa25.28■■□□□ 1.64
COPS7A-210ENST00000539735 KDM5AP29375 1690 aaKnown RBP25.28■■□□□ 1.64
COPS7A-210ENST00000539735 CCDC7Q96M83 1385 aa25.27■■□□□ 1.64
COPS7A-210ENST00000539735 SCAF11Q99590 1463 aaKnown RBP25.27■■□□□ 1.64
COPS7A-210ENST00000539735 RIMS2Q9UQ26 1411 aa25.26■■□□□ 1.63
COPS7A-210ENST00000539735 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-210ENST00000539735 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.26■■□□□ 1.63
COPS7A-210ENST00000539735 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-210ENST00000539735 RALGAPBQ86X10 1494 aa25.26■■□□□ 1.63
COPS7A-210ENST00000539735 BCANQ96GW7 911 aa25.24■■□□□ 1.63
COPS7A-210ENST00000539735 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
COPS7A-210ENST00000539735 ZFYVE9O95405 1425 aa25.22■■□□□ 1.63
COPS7A-210ENST00000539735 USP47Q96K76 1375 aa25.21■■□□□ 1.63
COPS7A-210ENST00000539735 C11orf95C9JLR9 678 aaPredicted RBP25.21■■□□□ 1.63
COPS7A-210ENST00000539735 MED14O60244 1454 aa25.19■■□□□ 1.62
COPS7A-210ENST00000539735 NEURL4Q96JN8 1562 aa25.19■■□□□ 1.62
COPS7A-210ENST00000539735 MYO5BQ9ULV0 1848 aa25.19■■□□□ 1.62
COPS7A-210ENST00000539735 CARD11Q9BXL7 1154 aa25.18■■□□□ 1.62
COPS7A-210ENST00000539735 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
COPS7A-210ENST00000539735 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
COPS7A-210ENST00000539735 KIF1BO60333 1816 aa25.17■■□□□ 1.62
COPS7A-210ENST00000539735 SLC26A8Q96RN1 970 aa25.15■■□□□ 1.62
COPS7A-210ENST00000539735 VGFO15240 615 aaPredicted RBP25.14■■□□□ 1.62
COPS7A-210ENST00000539735 PLEKHG1Q9ULL1 1385 aa25.14■■□□□ 1.61
COPS7A-210ENST00000539735 ROCK2O75116 1388 aaKnown RBP25.13■■□□□ 1.61
COPS7A-210ENST00000539735 KIF7Q2M1P5 1343 aa25.12■■□□□ 1.61
COPS7A-210ENST00000539735 TRPM1Q7Z4N2 1603 aa25.12■■□□□ 1.61
COPS7A-210ENST00000539735 IQGAP1P46940 1657 aa25.11■■□□□ 1.61
COPS7A-210ENST00000539735 ZNF335Q9H4Z2 1342 aaPredicted RBP25.1■■□□□ 1.61
COPS7A-210ENST00000539735 NEXMIFQ5QGS0 1516 aa25.1■■□□□ 1.61
COPS7A-210ENST00000539735 PRKRIP1Q9H875 184 aaPredicted RBP25.07■■□□□ 1.6
COPS7A-210ENST00000539735 NBPF1Q3BBV0 1214 aa25.06■■□□□ 1.6
COPS7A-210ENST00000539735 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
COPS7A-210ENST00000539735 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
COPS7A-210ENST00000539735 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
COPS7A-210ENST00000539735 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
COPS7A-210ENST00000539735 ADAMTS13Q76LX8 1427 aa25.02■■□□□ 1.6
COPS7A-210ENST00000539735 GPRASP1Q5JY77 1395 aa25.01■■□□□ 1.59
COPS7A-210ENST00000539735 NEFLP07196 543 aa25.01■■□□□ 1.59
COPS7A-210ENST00000539735 POLR3GLQ9BT43 218 aa25■■□□□ 1.59
COPS7A-210ENST00000539735 HNRNPUQ00839 825 aaKnown RBP eCLIP24.98■■□□□ 1.59
COPS7A-210ENST00000539735 FKBP8Q14318 412 aa24.98■■□□□ 1.59
COPS7A-210ENST00000539735 PPLO60437 1756 aa24.97■■□□□ 1.59
COPS7A-210ENST00000539735 LAMC1P11047 1609 aa24.97■■□□□ 1.59
COPS7A-210ENST00000539735 KCNA6P17658 529 aa24.96■■□□□ 1.59
COPS7A-210ENST00000539735 SETBP1Q9Y6X0 1596 aa24.96■■□□□ 1.59
COPS7A-210ENST00000539735 METP08581 1390 aa24.93■■□□□ 1.58
COPS7A-210ENST00000539735 MYOM2P54296 1465 aa24.93■■□□□ 1.58
COPS7A-210ENST00000539735 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
COPS7A-210ENST00000539735 PIK3C2GO75747 1445 aa24.92■■□□□ 1.58
COPS7A-210ENST00000539735 LTBP4Q8N2S1 1624 aa24.92■■□□□ 1.58
COPS7A-210ENST00000539735 DIP2AQ14689 1571 aa24.91■■□□□ 1.58
COPS7A-210ENST00000539735 PIK3R4Q99570 1358 aa24.91■■□□□ 1.58
COPS7A-210ENST00000539735 NRXN3Q9Y4C0 1643 aa24.91■■□□□ 1.58
COPS7A-210ENST00000539735 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
COPS7A-210ENST00000539735 IFT172Q9UG01 1749 aa24.9■■□□□ 1.58
COPS7A-210ENST00000539735 CFAP70Q5T0N1 1121 aa24.9■■□□□ 1.58
COPS7A-210ENST00000539735 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
COPS7A-210ENST00000539735 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
COPS7A-210ENST00000539735 ALKQ9UM73 1620 aa24.89■■□□□ 1.57
COPS7A-210ENST00000539735 C14orf93Q9H972 538 aaKnown RBP24.89■■□□□ 1.57
COPS7A-210ENST00000539735 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
COPS7A-210ENST00000539735 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
COPS7A-210ENST00000539735 CPS1P31327 1500 aa24.87■■□□□ 1.57
COPS7A-210ENST00000539735 TMEM132EQ6IEE7 984 aa24.86■■□□□ 1.57
COPS7A-210ENST00000539735 RBM33Q96EV2 1170 aaKnown RBP24.86■■□□□ 1.57
COPS7A-210ENST00000539735 PTPRUQ92729 1446 aa24.85■■□□□ 1.57
COPS7A-210ENST00000539735 STK26Q9P289 416 aa24.83■■□□□ 1.57
COPS7A-210ENST00000539735 ZBED9Q6R2W3 1325 aa24.82■■□□□ 1.56
COPS7A-210ENST00000539735 TESK2Q96S53 571 aa24.82■■□□□ 1.56
COPS7A-210ENST00000539735 LRRC7Q96NW7 1537 aa24.81■■□□□ 1.56
COPS7A-210ENST00000539735 KIAA1210Q9ULL0 1709 aa24.81■■□□□ 1.56
COPS7A-210ENST00000539735 STRCP1A6NGW2 1772 aa24.81■■□□□ 1.56
COPS7A-210ENST00000539735 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
COPS7A-210ENST00000539735 NKTRP30414 1462 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms