RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 APAF1O14727 1248 aa17.39■□□□□ 0.37
PLXNB3-209ENST00000538966 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
PLXNB3-209ENST00000538966 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
PLXNB3-209ENST00000538966 ATP6V1DQ9Y5K8 247 aa17.38■□□□□ 0.37
PLXNB3-209ENST00000538966 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
PLXNB3-209ENST00000538966 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
PLXNB3-209ENST00000538966 MSH5O43196 834 aa17.37■□□□□ 0.37
PLXNB3-209ENST00000538966 FOSBP53539 338 aa17.37■□□□□ 0.37
PLXNB3-209ENST00000538966 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 RAD21O60216 631 aa17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 SETQ01105 290 aaPredicted RBP17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 FAM13BQ9NYF5 915 aa17.36■□□□□ 0.37
PLXNB3-209ENST00000538966 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
PLXNB3-209ENST00000538966 COG3Q96JB2 828 aa17.35■□□□□ 0.37
PLXNB3-209ENST00000538966 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
PLXNB3-209ENST00000538966 TPM1P09493 284 aa17.35■□□□□ 0.37
PLXNB3-209ENST00000538966 TPM2P07951 284 aa17.34■□□□□ 0.37
PLXNB3-209ENST00000538966 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
PLXNB3-209ENST00000538966 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
PLXNB3-209ENST00000538966 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
PLXNB3-209ENST00000538966 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.37
PLXNB3-209ENST00000538966 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.37
PLXNB3-209ENST00000538966 C9orf78Q9NZ63 289 aaPredicted RBP17.33■□□□□ 0.36
PLXNB3-209ENST00000538966 BICD2Q8TD16 824 aa17.33■□□□□ 0.36
PLXNB3-209ENST00000538966 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
PLXNB3-209ENST00000538966 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
PLXNB3-209ENST00000538966 USP47Q96K76 1375 aa17.32■□□□□ 0.36
PLXNB3-209ENST00000538966 APPP05067 770 aa17.32■□□□□ 0.36
PLXNB3-209ENST00000538966 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
PLXNB3-209ENST00000538966 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
PLXNB3-209ENST00000538966 TRIM29Q14134 588 aa17.31■□□□□ 0.36
PLXNB3-209ENST00000538966 HOMER1Q86YM7 354 aa17.31■□□□□ 0.36
PLXNB3-209ENST00000538966 REC8O95072 547 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 TEFQ10587 303 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 GPS2Q13227 327 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
PLXNB3-209ENST00000538966 RIPK4P57078 832 aa17.29■□□□□ 0.36
PLXNB3-209ENST00000538966 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
PLXNB3-209ENST00000538966 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
PLXNB3-209ENST00000538966 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
PLXNB3-209ENST00000538966 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
PLXNB3-209ENST00000538966 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
PLXNB3-209ENST00000538966 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
PLXNB3-209ENST00000538966 CPLX1O14810 134 aa17.28■□□□□ 0.36
PLXNB3-209ENST00000538966 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
PLXNB3-209ENST00000538966 LNPKQ9C0E8 428 aa17.27■□□□□ 0.35
PLXNB3-209ENST00000538966 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
PLXNB3-209ENST00000538966 PTPRGP23470 1445 aa17.26■□□□□ 0.35
PLXNB3-209ENST00000538966 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
PLXNB3-209ENST00000538966 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
PLXNB3-209ENST00000538966 EVA1CP58658 441 aa17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 CPLX2Q6PUV4 134 aaKnown RBP17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
PLXNB3-209ENST00000538966 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
PLXNB3-209ENST00000538966 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
PLXNB3-209ENST00000538966 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
PLXNB3-209ENST00000538966 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
PLXNB3-209ENST00000538966 TCEAL9Q9UHQ7 104 aa17.23■□□□□ 0.35
PLXNB3-209ENST00000538966 KDM4AO75164 1064 aa17.23■□□□□ 0.35
PLXNB3-209ENST00000538966 IPO7O95373 1038 aaKnown RBP17.23■□□□□ 0.35
PLXNB3-209ENST00000538966 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
PLXNB3-209ENST00000538966 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
PLXNB3-209ENST00000538966 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
PLXNB3-209ENST00000538966 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
PLXNB3-209ENST00000538966 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 HMOX1P09601 288 aa17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
PLXNB3-209ENST00000538966 TEX35Q5T0J7 233 aa17.21■□□□□ 0.34
PLXNB3-209ENST00000538966 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.21■□□□□ 0.34
PLXNB3-209ENST00000538966 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 TRDNQ13061 729 aa17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
PLXNB3-209ENST00000538966 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 CUX1P39880 1505 aa17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 NAP1L1P55209 391 aaKnown RBP17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms