RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 ANKRD30BQ9BXX2 1392 aa32.33■■■□□ 2.77
RHBDL3-204ENST00000538145 TXNDC2Q86VQ3 553 aa32.31■■■□□ 2.76
RHBDL3-204ENST00000538145 EID1Q9Y6B2 187 aa32.31■■■□□ 2.76
RHBDL3-204ENST00000538145 NPHP4O75161 1426 aaPredicted RBP32.31■■■□□ 2.76
RHBDL3-204ENST00000538145 RIMS2Q9UQ26 1411 aa32.3■■■□□ 2.76
RHBDL3-204ENST00000538145 IQGAP1P46940 1657 aa32.29■■■□□ 2.76
RHBDL3-204ENST00000538145 IQSEC2Q5JU85 1478 aa32.28■■■□□ 2.76
RHBDL3-204ENST00000538145 HDGFP51858 240 aaKnown RBP32.26■■■□□ 2.76
RHBDL3-204ENST00000538145 ZNF335Q9H4Z2 1342 aaPredicted RBP32.26■■■□□ 2.75
RHBDL3-204ENST00000538145 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.25■■■□□ 2.75
RHBDL3-204ENST00000538145 SPATA31E1Q6ZUB1 1445 aa32.24■■■□□ 2.75
RHBDL3-204ENST00000538145 NEXMIFQ5QGS0 1516 aa32.23■■■□□ 2.75
RHBDL3-204ENST00000538145 PCGF6Q9BYE7 350 aa32.21■■■□□ 2.75
RHBDL3-204ENST00000538145 DHX57Q6P158 1386 aaKnown RBP32.19■■■□□ 2.74
RHBDL3-204ENST00000538145 PLEKHG1Q9ULL1 1385 aa32.19■■■□□ 2.74
RHBDL3-204ENST00000538145 ZNF326Q5BKZ1 582 aaKnown RBP32.18■■■□□ 2.74
RHBDL3-204ENST00000538145 RPGRIP1LQ68CZ1 1315 aa32.18■■■□□ 2.74
RHBDL3-204ENST00000538145 PPLO60437 1756 aa32.16■■■□□ 2.74
RHBDL3-204ENST00000538145 IFT172Q9UG01 1749 aa32.13■■■□□ 2.73
RHBDL3-204ENST00000538145 PPP1R15AO75807 674 aaPredicted RBP32.13■■■□□ 2.73
RHBDL3-204ENST00000538145 CPS1P31327 1500 aa32.11■■■□□ 2.73
RHBDL3-204ENST00000538145 NUTM2DQ5VT03 806 aaPredicted RBP32.09■■■□□ 2.73
RHBDL3-204ENST00000538145 SETBP1Q9Y6X0 1596 aa32.09■■■□□ 2.73
RHBDL3-204ENST00000538145 NRXN3Q9Y4C0 1643 aa32.07■■■□□ 2.72
RHBDL3-204ENST00000538145 VGFO15240 615 aaPredicted RBP32.06■■■□□ 2.72
RHBDL3-204ENST00000538145 DIP2AQ14689 1571 aa32.06■■■□□ 2.72
RHBDL3-204ENST00000538145 ADAMTS13Q76LX8 1427 aa32.06■■■□□ 2.72
RHBDL3-204ENST00000538145 RGL3Q3MIN7 710 aa32.05■■■□□ 2.72
RHBDL3-204ENST00000538145 TBX22Q9Y458 520 aa32.02■■■□□ 2.72
RHBDL3-204ENST00000538145 SLC26A8Q96RN1 970 aa32.01■■■□□ 2.72
RHBDL3-204ENST00000538145 STRCP1A6NGW2 1772 aa32.01■■■□□ 2.71
RHBDL3-204ENST00000538145 BCANQ96GW7 911 aa32■■■□□ 2.71
RHBDL3-204ENST00000538145 MYOM2P54296 1465 aa31.98■■■□□ 2.71
RHBDL3-204ENST00000538145 PIK3R4Q99570 1358 aa31.96■■■□□ 2.71
RHBDL3-204ENST00000538145 CHD2O14647 1828 aaKnown RBP31.96■■■□□ 2.71
RHBDL3-204ENST00000538145 NRXN1Q9ULB1 1477 aa31.95■■■□□ 2.71
RHBDL3-204ENST00000538145 NWD1Q149M9 1564 aa31.95■■■□□ 2.7
RHBDL3-204ENST00000538145 SETD1AO15047 1707 aaKnown RBP31.94■■■□□ 2.7
RHBDL3-204ENST00000538145 ADGRF5Q8IZF2 1346 aa31.94■■■□□ 2.7
RHBDL3-204ENST00000538145 STAC3Q96MF2 364 aa31.93■■■□□ 2.7
RHBDL3-204ENST00000538145 SENP3Q9H4L4 574 aaPredicted RBP31.92■■■□□ 2.7
RHBDL3-204ENST00000538145 PIK3C2GO75747 1445 aa31.92■■■□□ 2.7
RHBDL3-204ENST00000538145 KCNA6P17658 529 aa31.91■■■□□ 2.7
RHBDL3-204ENST00000538145 ALKQ9UM73 1620 aa31.9■■■□□ 2.7
RHBDL3-204ENST00000538145 SIN3AQ96ST3 1273 aa31.89■■■□□ 2.7
RHBDL3-204ENST00000538145 LRRC7Q96NW7 1537 aa31.88■■■□□ 2.69
RHBDL3-204ENST00000538145 UBAP1LF5GYI3 381 aa31.88■■■□□ 2.69
RHBDL3-204ENST00000538145 NKTRP30414 1462 aaKnown RBP31.86■■■□□ 2.69
RHBDL3-204ENST00000538145 METP08581 1390 aa31.85■■■□□ 2.69
RHBDL3-204ENST00000538145 DCAF11Q8TEB1 546 aa31.84■■■□□ 2.69
RHBDL3-204ENST00000538145 PTPRUQ92729 1446 aa31.83■■■□□ 2.69
RHBDL3-204ENST00000538145 LAMC1P11047 1609 aa31.82■■■□□ 2.68
RHBDL3-204ENST00000538145 XRN1Q8IZH2 1706 aaKnown RBP31.82■■■□□ 2.68
RHBDL3-204ENST00000538145 CLSPNQ9HAW4 1339 aa31.8■■■□□ 2.68
RHBDL3-204ENST00000538145 C14orf93Q9H972 538 aaKnown RBP31.78■■■□□ 2.68
RHBDL3-204ENST00000538145 PRAG1Q86YV5 1406 aa31.78■■■□□ 2.68
RHBDL3-204ENST00000538145 XIRP1Q702N8 1843 aaKnown RBP31.78■■■□□ 2.68
RHBDL3-204ENST00000538145 NEUROD1Q13562 356 aa31.77■■■□□ 2.68
RHBDL3-204ENST00000538145 TOM1O60784 492 aa31.76■■■□□ 2.68
RHBDL3-204ENST00000538145 AMOTL2Q9Y2J4 779 aa31.76■■■□□ 2.68
RHBDL3-204ENST00000538145 KDM2AQ9Y2K7 1162 aa31.75■■■□□ 2.67
RHBDL3-204ENST00000538145 ASXL1Q8IXJ9 1541 aa31.75■■■□□ 2.67
RHBDL3-204ENST00000538145 L3MBTL2Q969R5 705 aa31.75■■■□□ 2.67
RHBDL3-204ENST00000538145 CFAP70Q5T0N1 1121 aa31.71■■■□□ 2.67
RHBDL3-204ENST00000538145 NCOA3Q9Y6Q9 1424 aa31.7■■■□□ 2.67
RHBDL3-204ENST00000538145 TMEM94Q12767 1356 aa31.69■■■□□ 2.66
RHBDL3-204ENST00000538145 KIAA1210Q9ULL0 1709 aa31.69■■■□□ 2.66
RHBDL3-204ENST00000538145 PROSER2Q86WR7 435 aaPredicted RBP31.69■■■□□ 2.66
RHBDL3-204ENST00000538145 PTCH1Q13635 1447 aa31.68■■■□□ 2.66
RHBDL3-204ENST00000538145 KNDC1Q76NI1 1749 aa31.67■■■□□ 2.66
RHBDL3-204ENST00000538145 TECPR2O15040 1411 aa31.67■■■□□ 2.66
RHBDL3-204ENST00000538145 ADGRB1O14514 1584 aa31.67■■■□□ 2.66
RHBDL3-204ENST00000538145 LRPPRCP42704 1394 aaKnown RBP31.66■■■□□ 2.66
RHBDL3-204ENST00000538145 TONSLQ96HA7 1378 aa31.64■■■□□ 2.66
RHBDL3-204ENST00000538145 ABCC11Q96J66 1382 aa31.64■■■□□ 2.66
RHBDL3-204ENST00000538145 YTHDC2Q9H6S0 1430 aaKnown RBP31.63■■■□□ 2.65
RHBDL3-204ENST00000538145 TMEM132EQ6IEE7 984 aa31.63■■■□□ 2.65
RHBDL3-204ENST00000538145 PIP4K2BP78356 416 aa31.62■■■□□ 2.65
RHBDL3-204ENST00000538145 CCER1Q8TC90 406 aaPredicted RBP31.6■■■□□ 2.65
RHBDL3-204ENST00000538145 ROBO2Q9HCK4 1378 aa31.6■■■□□ 2.65
RHBDL3-204ENST00000538145 RBM33Q96EV2 1170 aaKnown RBP31.58■■■□□ 2.65
RHBDL3-204ENST00000538145 SCAF1Q9H7N4 1312 aaKnown RBP31.57■■■□□ 2.64
RHBDL3-204ENST00000538145 SIRT1Q96EB6 747 aa31.56■■■□□ 2.64
RHBDL3-204ENST00000538145 TIMELESSQ9UNS1 1208 aa31.55■■■□□ 2.64
RHBDL3-204ENST00000538145 DLC1Q96QB1 1528 aa31.55■■■□□ 2.64
RHBDL3-204ENST00000538145 TRPM1Q7Z4N2 1603 aa31.54■■■□□ 2.64
RHBDL3-204ENST00000538145 HSPA1LP34931 641 aa31.53■■■□□ 2.64
RHBDL3-204ENST00000538145 FAM135BQ49AJ0 1406 aa31.53■■■□□ 2.64
RHBDL3-204ENST00000538145 MSH6P52701 1360 aa31.52■■■□□ 2.64
RHBDL3-204ENST00000538145 STK26Q9P289 416 aa31.52■■■□□ 2.64
RHBDL3-204ENST00000538145 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.51■■■□□ 2.63
RHBDL3-204ENST00000538145 C19orf44Q9H6X5 657 aa31.5■■■□□ 2.63
RHBDL3-204ENST00000538145 NALCNQ8IZF0 1738 aa31.5■■■□□ 2.63
RHBDL3-204ENST00000538145 ADGRL3Q9HAR2 1447 aa31.49■■■□□ 2.63
RHBDL3-204ENST00000538145 DCCP43146 1447 aa31.49■■■□□ 2.63
RHBDL3-204ENST00000538145 NBPF8Q3BBV2 869 aa31.48■■■□□ 2.63
RHBDL3-204ENST00000538145 NBPF1Q3BBV0 1214 aa31.47■■■□□ 2.63
RHBDL3-204ENST00000538145 C14orf37Q86TY3 774 aa31.45■■■□□ 2.62
RHBDL3-204ENST00000538145 ARHGEF28Q8N1W1 1705 aaKnown RBP31.44■■■□□ 2.62
RHBDL3-204ENST00000538145 WAPLQ7Z5K2 1190 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms