RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
IFT88-207ENST00000537103 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
IFT88-207ENST00000537103 UBR1Q8IWV7 1749 aa9.74□□□□□ -0.85
IFT88-207ENST00000537103 UGGT1Q9NYU2 1555 aa9.73□□□□□ -0.85
IFT88-207ENST00000537103 C14orf37Q86TY3 774 aa9.72□□□□□ -0.85
IFT88-207ENST00000537103 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
IFT88-207ENST00000537103 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
IFT88-207ENST00000537103 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
IFT88-207ENST00000537103 DIP2AQ14689 1571 aa9.71□□□□□ -0.85
IFT88-207ENST00000537103 MED14O60244 1454 aa9.71□□□□□ -0.85
IFT88-207ENST00000537103 KIF1BO60333 1816 aa9.71□□□□□ -0.86
IFT88-207ENST00000537103 RPGRIP1LQ68CZ1 1315 aa9.71□□□□□ -0.86
IFT88-207ENST00000537103 ITGAEP38570 1179 aa9.7□□□□□ -0.86
IFT88-207ENST00000537103 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
IFT88-207ENST00000537103 MPHOSPH9Q99550 1183 aa9.7□□□□□ -0.86
IFT88-207ENST00000537103 CLTCL1P53675 1640 aa9.7□□□□□ -0.86
IFT88-207ENST00000537103 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
IFT88-207ENST00000537103 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
IFT88-207ENST00000537103 ANKRD30BQ9BXX2 1392 aa9.69□□□□□ -0.86
IFT88-207ENST00000537103 MYOM2P54296 1465 aa9.68□□□□□ -0.86
IFT88-207ENST00000537103 MLECQ14165 292 aa9.68□□□□□ -0.86
IFT88-207ENST00000537103 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
IFT88-207ENST00000537103 PRAG1Q86YV5 1406 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 HDGFP51858 240 aaKnown RBP9.67□□□□□ -0.86
IFT88-207ENST00000537103 PKD2Q13563 968 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 LAMC1P11047 1609 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 CCDC144AA2RUR9 1427 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 SPATA31E1Q6ZUB1 1445 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
IFT88-207ENST00000537103 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
IFT88-207ENST00000537103 DHX57Q6P158 1386 aaKnown RBP9.66□□□□□ -0.86
IFT88-207ENST00000537103 SETBP1Q9Y6X0 1596 aa9.66□□□□□ -0.86
IFT88-207ENST00000537103 NRXN1Q9ULB1 1477 aa9.66□□□□□ -0.86
IFT88-207ENST00000537103 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
IFT88-207ENST00000537103 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
IFT88-207ENST00000537103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.86
IFT88-207ENST00000537103 NEXMIFQ5QGS0 1516 aa9.65□□□□□ -0.86
IFT88-207ENST00000537103 PPLO60437 1756 aa9.65□□□□□ -0.87
IFT88-207ENST00000537103 KIAA1210Q9ULL0 1709 aa9.64□□□□□ -0.87
IFT88-207ENST00000537103 TMEM2Q9UHN6 1383 aa9.64□□□□□ -0.87
IFT88-207ENST00000537103 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
IFT88-207ENST00000537103 PIK3R4Q99570 1358 aa9.63□□□□□ -0.87
IFT88-207ENST00000537103 DMRT2Q9Y5R5 561 aa9.63□□□□□ -0.87
IFT88-207ENST00000537103 SCAF11Q99590 1463 aaKnown RBP9.63□□□□□ -0.87
IFT88-207ENST00000537103 IQSEC2Q5JU85 1478 aa9.63□□□□□ -0.87
IFT88-207ENST00000537103 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
IFT88-207ENST00000537103 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
IFT88-207ENST00000537103 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
IFT88-207ENST00000537103 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
IFT88-207ENST00000537103 IQGAP1P46940 1657 aa9.62□□□□□ -0.87
IFT88-207ENST00000537103 STRCQ7RTU9 1775 aa9.61□□□□□ -0.87
IFT88-207ENST00000537103 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
IFT88-207ENST00000537103 IDI1Q13907 227 aa9.6□□□□□ -0.87
IFT88-207ENST00000537103 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
IFT88-207ENST00000537103 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
IFT88-207ENST00000537103 KNDC1Q76NI1 1749 aa9.59□□□□□ -0.87
IFT88-207ENST00000537103 CEBPAP49715 358 aaPredicted RBP9.59□□□□□ -0.87
IFT88-207ENST00000537103 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
IFT88-207ENST00000537103 NPHP4O75161 1426 aaPredicted RBP9.58□□□□□ -0.88
IFT88-207ENST00000537103 NCOA3Q9Y6Q9 1424 aa9.58□□□□□ -0.88
IFT88-207ENST00000537103 CPS1P31327 1500 aa9.58□□□□□ -0.88
IFT88-207ENST00000537103 MYO5BQ9ULV0 1848 aa9.58□□□□□ -0.88
IFT88-207ENST00000537103 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
IFT88-207ENST00000537103 ANKLE2Q86XL3 938 aa9.58□□□□□ -0.88
IFT88-207ENST00000537103 EID1Q9Y6B2 187 aa9.58□□□□□ -0.88
IFT88-207ENST00000537103 NRXN3Q9Y4C0 1643 aa9.57□□□□□ -0.88
IFT88-207ENST00000537103 NKTRP30414 1462 aaKnown RBP9.57□□□□□ -0.88
IFT88-207ENST00000537103 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
IFT88-207ENST00000537103 PIK3C2GO75747 1445 aa9.56□□□□□ -0.88
IFT88-207ENST00000537103 DLC1Q96QB1 1528 aa9.55□□□□□ -0.88
IFT88-207ENST00000537103 NBR1Q14596 966 aa9.55□□□□□ -0.88
IFT88-207ENST00000537103 XRN1Q8IZH2 1706 aaKnown RBP9.54□□□□□ -0.88
IFT88-207ENST00000537103 TBX22Q9Y458 520 aa9.54□□□□□ -0.88
IFT88-207ENST00000537103 TECPR2O15040 1411 aa9.54□□□□□ -0.88
IFT88-207ENST00000537103 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
IFT88-207ENST00000537103 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
IFT88-207ENST00000537103 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
IFT88-207ENST00000537103 STAG3Q9UJ98 1225 aa9.53□□□□□ -0.88
IFT88-207ENST00000537103 ADAMTS13Q76LX8 1427 aa9.53□□□□□ -0.88
IFT88-207ENST00000537103 ALKQ9UM73 1620 aa9.52□□□□□ -0.89
IFT88-207ENST00000537103 PTCH1Q13635 1447 aa9.52□□□□□ -0.89
IFT88-207ENST00000537103 CHD2O14647 1828 aaKnown RBP9.52□□□□□ -0.89
IFT88-207ENST00000537103 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
IFT88-207ENST00000537103 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
IFT88-207ENST00000537103 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
IFT88-207ENST00000537103 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
IFT88-207ENST00000537103 TRPM1Q7Z4N2 1603 aa9.5□□□□□ -0.89
IFT88-207ENST00000537103 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
IFT88-207ENST00000537103 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
IFT88-207ENST00000537103 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
IFT88-207ENST00000537103 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
IFT88-207ENST00000537103 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
IFT88-207ENST00000537103 FAM135BQ49AJ0 1406 aa9.49□□□□□ -0.89
IFT88-207ENST00000537103 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
IFT88-207ENST00000537103 LRPPRCP42704 1394 aaKnown RBP9.48□□□□□ -0.89
IFT88-207ENST00000537103 ADGRB2O60241 1585 aa9.48□□□□□ -0.89
IFT88-207ENST00000537103 C14orf93Q9H972 538 aaKnown RBP9.48□□□□□ -0.89
IFT88-207ENST00000537103 DCCP43146 1447 aa9.48□□□□□ -0.89
IFT88-207ENST00000537103 LTKP29376 864 aa9.47□□□□□ -0.89
IFT88-207ENST00000537103 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms