RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ZNF335Q9H4Z2 1342 aaPredicted RBP26.41■■□□□ 1.82
DDX55-204ENST00000536079 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
DDX55-204ENST00000536079 ANKRD30BQ9BXX2 1392 aa26.39■■□□□ 1.82
DDX55-204ENST00000536079 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.81
DDX55-204ENST00000536079 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
DDX55-204ENST00000536079 LTBP4Q8N2S1 1624 aa26.35■■□□□ 1.81
DDX55-204ENST00000536079 SPATA31E1Q6ZUB1 1445 aa26.34■■□□□ 1.81
DDX55-204ENST00000536079 KIF1BO60333 1816 aa26.33■■□□□ 1.81
DDX55-204ENST00000536079 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.81
DDX55-204ENST00000536079 SLC26A8Q96RN1 970 aa26.33■■□□□ 1.81
DDX55-204ENST00000536079 NEXMIFQ5QGS0 1516 aa26.33■■□□□ 1.81
DDX55-204ENST00000536079 PLEKHG1Q9ULL1 1385 aa26.33■■□□□ 1.8
DDX55-204ENST00000536079 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.32■■□□□ 1.8
DDX55-204ENST00000536079 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
DDX55-204ENST00000536079 HDGFP51858 240 aaKnown RBP26.3■■□□□ 1.8
DDX55-204ENST00000536079 BCANQ96GW7 911 aa26.28■■□□□ 1.8
DDX55-204ENST00000536079 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
DDX55-204ENST00000536079 CERKQ8TCT0 537 aa26.27■■□□□ 1.8
DDX55-204ENST00000536079 ADAMTS13Q76LX8 1427 aa26.27■■□□□ 1.8
DDX55-204ENST00000536079 DHX57Q6P158 1386 aaKnown RBP26.25■■□□□ 1.79
DDX55-204ENST00000536079 STRCP1A6NGW2 1772 aa26.24■■□□□ 1.79
DDX55-204ENST00000536079 RPGRIP1LQ68CZ1 1315 aa26.23■■□□□ 1.79
DDX55-204ENST00000536079 NRXN3Q9Y4C0 1643 aa26.21■■□□□ 1.79
DDX55-204ENST00000536079 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
DDX55-204ENST00000536079 TBX22Q9Y458 520 aa26.2■■□□□ 1.78
DDX55-204ENST00000536079 PPLO60437 1756 aa26.2■■□□□ 1.78
DDX55-204ENST00000536079 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
DDX55-204ENST00000536079 SETBP1Q9Y6X0 1596 aa26.18■■□□□ 1.78
DDX55-204ENST00000536079 KCNA6P17658 529 aa26.15■■□□□ 1.78
DDX55-204ENST00000536079 SIN3AQ96ST3 1273 aa26.15■■□□□ 1.78
DDX55-204ENST00000536079 IFT172Q9UG01 1749 aa26.14■■□□□ 1.78
DDX55-204ENST00000536079 METP08581 1390 aa26.14■■□□□ 1.78
DDX55-204ENST00000536079 CPS1P31327 1500 aa26.14■■□□□ 1.77
DDX55-204ENST00000536079 PTPRUQ92729 1446 aa26.14■■□□□ 1.77
DDX55-204ENST00000536079 LRRC7Q96NW7 1537 aa26.12■■□□□ 1.77
DDX55-204ENST00000536079 RBM33Q96EV2 1170 aaKnown RBP26.11■■□□□ 1.77
DDX55-204ENST00000536079 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
DDX55-204ENST00000536079 NWD1Q149M9 1564 aa26.09■■□□□ 1.77
DDX55-204ENST00000536079 ALKQ9UM73 1620 aa26.08■■□□□ 1.77
DDX55-204ENST00000536079 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
DDX55-204ENST00000536079 DCAF11Q8TEB1 546 aa26.06■■□□□ 1.76
DDX55-204ENST00000536079 AMOTL2Q9Y2J4 779 aa26.06■■□□□ 1.76
DDX55-204ENST00000536079 KDM2AQ9Y2K7 1162 aa26.06■■□□□ 1.76
DDX55-204ENST00000536079 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
DDX55-204ENST00000536079 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
DDX55-204ENST00000536079 NRXN1Q9ULB1 1477 aa26.05■■□□□ 1.76
DDX55-204ENST00000536079 PIK3R4Q99570 1358 aa26.05■■□□□ 1.76
DDX55-204ENST00000536079 MYOM2P54296 1465 aa26.04■■□□□ 1.76
DDX55-204ENST00000536079 NEUROD1Q13562 356 aa26.04■■□□□ 1.76
DDX55-204ENST00000536079 PROSER2Q86WR7 435 aaPredicted RBP26.03■■□□□ 1.76
DDX55-204ENST00000536079 TMEM94Q12767 1356 aa26.03■■□□□ 1.76
DDX55-204ENST00000536079 IQSEC2Q5JU85 1478 aa26.03■■□□□ 1.76
DDX55-204ENST00000536079 ILDR1Q86SU0 546 aaPredicted RBP26.02■■□□□ 1.76
DDX55-204ENST00000536079 FBXO41Q8TF61 875 aa26.01■■□□□ 1.75
DDX55-204ENST00000536079 NKTRP30414 1462 aaKnown RBP26■■□□□ 1.75
DDX55-204ENST00000536079 CFAP70Q5T0N1 1121 aa26■■□□□ 1.75
DDX55-204ENST00000536079 XIRP1Q702N8 1843 aaKnown RBP26■■□□□ 1.75
DDX55-204ENST00000536079 TMEM132EQ6IEE7 984 aa25.99■■□□□ 1.75
DDX55-204ENST00000536079 ASXL1Q8IXJ9 1541 aa25.98■■□□□ 1.75
DDX55-204ENST00000536079 XRN1Q8IZH2 1706 aaKnown RBP25.98■■□□□ 1.75
DDX55-204ENST00000536079 C14orf93Q9H972 538 aaKnown RBP25.98■■□□□ 1.75
DDX55-204ENST00000536079 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
DDX55-204ENST00000536079 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
DDX55-204ENST00000536079 ROBO2Q9HCK4 1378 aa25.93■■□□□ 1.74
DDX55-204ENST00000536079 STK26Q9P289 416 aa25.91■■□□□ 1.74
DDX55-204ENST00000536079 STAC3Q96MF2 364 aa25.89■■□□□ 1.74
DDX55-204ENST00000536079 LRPPRCP42704 1394 aaKnown RBP25.88■■□□□ 1.73
DDX55-204ENST00000536079 PRAG1Q86YV5 1406 aa25.86■■□□□ 1.73
DDX55-204ENST00000536079 YTHDC2Q9H6S0 1430 aaKnown RBP25.86■■□□□ 1.73
DDX55-204ENST00000536079 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
DDX55-204ENST00000536079 PTCH1Q13635 1447 aa25.85■■□□□ 1.73
DDX55-204ENST00000536079 TOM1O60784 492 aa25.84■■□□□ 1.73
DDX55-204ENST00000536079 PIP4K2BP78356 416 aa25.84■■□□□ 1.73
DDX55-204ENST00000536079 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
DDX55-204ENST00000536079 ABCC11Q96J66 1382 aa25.83■■□□□ 1.73
DDX55-204ENST00000536079 WAPLQ7Z5K2 1190 aa25.83■■□□□ 1.73
DDX55-204ENST00000536079 PLEKHH1Q9ULM0 1364 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 TECPR2O15040 1411 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 LAMC1P11047 1609 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 NBPF1Q3BBV0 1214 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 C14orf37Q86TY3 774 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 MSH6P52701 1360 aa25.82■■□□□ 1.72
DDX55-204ENST00000536079 C19orf44Q9H6X5 657 aa25.8■■□□□ 1.72
DDX55-204ENST00000536079 NBPF8Q3BBV2 869 aa25.79■■□□□ 1.72
DDX55-204ENST00000536079 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
DDX55-204ENST00000536079 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.77■■□□□ 1.72
DDX55-204ENST00000536079 TRAK1Q9UPV9 953 aa25.76■■□□□ 1.71
DDX55-204ENST00000536079 TONSLQ96HA7 1378 aa25.76■■□□□ 1.71
DDX55-204ENST00000536079 ADGRL3Q9HAR2 1447 aa25.76■■□□□ 1.71
DDX55-204ENST00000536079 KNDC1Q76NI1 1749 aa25.76■■□□□ 1.71
DDX55-204ENST00000536079 NALCNQ8IZF0 1738 aa25.75■■□□□ 1.71
DDX55-204ENST00000536079 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
DDX55-204ENST00000536079 SIRT1Q96EB6 747 aa25.73■■□□□ 1.71
DDX55-204ENST00000536079 PRAM1Q96QH2 718 aa25.73■■□□□ 1.71
DDX55-204ENST00000536079 SLAIN2Q9P270 581 aa25.73■■□□□ 1.71
DDX55-204ENST00000536079 FAM135BQ49AJ0 1406 aa25.71■■□□□ 1.71
DDX55-204ENST00000536079 ATF3P18847 181 aa25.71■■□□□ 1.71
DDX55-204ENST00000536079 SAFB2Q14151 953 aaKnown RBP eCLIP25.71■■□□□ 1.71
DDX55-204ENST00000536079 KIAA1210Q9ULL0 1709 aa25.71■■□□□ 1.71
DDX55-204ENST00000536079 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms