RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
PDE3B-205ENST00000534317 BECN2A8MW95 431 aa22.9■■□□□ 1.26
PDE3B-205ENST00000534317 NEXNQ0ZGT2 675 aa22.9■■□□□ 1.26
PDE3B-205ENST00000534317 RUNDC1Q96C34 613 aa22.9■■□□□ 1.26
PDE3B-205ENST00000534317 TNNT3P45378 269 aaPredicted RBP22.9■■□□□ 1.26
PDE3B-205ENST00000534317 RSPH6AQ9H0K4 717 aa22.9■■□□□ 1.26
PDE3B-205ENST00000534317 KIF7Q2M1P5 1343 aa22.89■■□□□ 1.25
PDE3B-205ENST00000534317 ZKSCAN1P17029 563 aaPredicted RBP22.89■■□□□ 1.25
PDE3B-205ENST00000534317 C9orf78Q9NZ63 289 aaPredicted RBP22.89■■□□□ 1.25
PDE3B-205ENST00000534317 MARCH6O60337 910 aa22.88■■□□□ 1.25
PDE3B-205ENST00000534317 LRRFIP1Q32MZ4 808 aaKnown RBP22.88■■□□□ 1.25
PDE3B-205ENST00000534317 CHMP5Q9NZZ3 219 aa22.88■■□□□ 1.25
PDE3B-205ENST00000534317 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
PDE3B-205ENST00000534317 EIF2S2P20042 333 aaKnown RBP22.87■■□□□ 1.25
PDE3B-205ENST00000534317 A0A0U1RQG5 324 aaPredicted RBP22.87■■□□□ 1.25
PDE3B-205ENST00000534317 TPD52L1Q16890 204 aaPredicted RBP22.87■■□□□ 1.25
PDE3B-205ENST00000534317 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
PDE3B-205ENST00000534317 AKAP17AQ02040 695 aaKnown RBP22.86■■□□□ 1.25
PDE3B-205ENST00000534317 HSP90AA2PQ14568 343 aaPredicted RBP22.86■■□□□ 1.25
PDE3B-205ENST00000534317 MCTP1Q6DN14 999 aa22.85■■□□□ 1.25
PDE3B-205ENST00000534317 PES1O00541 588 aaKnown RBP22.84■■□□□ 1.25
PDE3B-205ENST00000534317 CPLX2Q6PUV4 134 aaKnown RBP22.84■■□□□ 1.25
PDE3B-205ENST00000534317 TTC5Q8N0Z6 440 aa22.84■■□□□ 1.25
PDE3B-205ENST00000534317 SYNE3Q6ZMZ3 975 aa22.84■■□□□ 1.25
PDE3B-205ENST00000534317 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
PDE3B-205ENST00000534317 IFIT2P09913 472 aaKnown RBP22.84■■□□□ 1.25
PDE3B-205ENST00000534317 STAC3Q96MF2 364 aa22.84■■□□□ 1.25
PDE3B-205ENST00000534317 TSR1Q2NL82 804 aaKnown RBP22.83■■□□□ 1.24
PDE3B-205ENST00000534317 IGF1RP08069 1367 aa22.82■■□□□ 1.24
PDE3B-205ENST00000534317 ANO2Q9NQ90 1003 aa22.82■■□□□ 1.24
PDE3B-205ENST00000534317 CEP89Q96ST8 783 aa22.81■■□□□ 1.24
PDE3B-205ENST00000534317 AAMPQ13685 434 aa22.81■■□□□ 1.24
PDE3B-205ENST00000534317 GNAI1P63096 354 aa22.81■■□□□ 1.24
PDE3B-205ENST00000534317 FKBP5Q13451 457 aaPredicted RBP22.8■■□□□ 1.24
PDE3B-205ENST00000534317 VPS53Q5VIR6 699 aa22.8■■□□□ 1.24
PDE3B-205ENST00000534317 CUX1P39880 1505 aa22.8■■□□□ 1.24
PDE3B-205ENST00000534317 INTS3Q68E01 1043 aaKnown RBP22.8■■□□□ 1.24
PDE3B-205ENST00000534317 NECTIN2Q92692 538 aa22.8■■□□□ 1.24
PDE3B-205ENST00000534317 TPM1P09493 284 aa22.79■■□□□ 1.24
PDE3B-205ENST00000534317 DDX58O95786 925 aaKnown RBP22.79■■□□□ 1.24
PDE3B-205ENST00000534317 MIA2Q96PC5 1412 aa22.78■■□□□ 1.24
PDE3B-205ENST00000534317 RNF20Q5VTR2 975 aa22.78■■□□□ 1.24
PDE3B-205ENST00000534317 PDE4CQ08493 712 aa22.78■■□□□ 1.24
PDE3B-205ENST00000534317 TRIM29Q14134 588 aa22.77■■□□□ 1.24
PDE3B-205ENST00000534317 ZNF644Q9H582 1327 aaPredicted RBP22.77■■□□□ 1.24
PDE3B-205ENST00000534317 LNPKQ9C0E8 428 aa22.77■■□□□ 1.23
PDE3B-205ENST00000534317 NUCB2P80303 420 aa22.76■■□□□ 1.23
PDE3B-205ENST00000534317 G3BP1Q13283 466 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDE3B-205ENST00000534317 GAPVD1Q14C86 1478 aa22.76■■□□□ 1.23
PDE3B-205ENST00000534317 TPM2P07951 284 aa22.76■■□□□ 1.23
PDE3B-205ENST00000534317 C22orf23Q9BZE7 217 aa22.76■■□□□ 1.23
PDE3B-205ENST00000534317 CPLX1O14810 134 aa22.75■■□□□ 1.23
PDE3B-205ENST00000534317 EVA1CP58658 441 aa22.75■■□□□ 1.23
PDE3B-205ENST00000534317 CCAR2Q8N163 923 aaKnown RBP22.75■■□□□ 1.23
PDE3B-205ENST00000534317 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
PDE3B-205ENST00000534317 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
PDE3B-205ENST00000534317 HSP90AB4PQ58FF6 505 aa22.74■■□□□ 1.23
PDE3B-205ENST00000534317 BICD2Q8TD16 824 aa22.73■■□□□ 1.23
PDE3B-205ENST00000534317 TSPYL4Q9UJ04 414 aa22.73■■□□□ 1.23
PDE3B-205ENST00000534317 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
PDE3B-205ENST00000534317 SMC3Q9UQE7 1217 aa22.72■■□□□ 1.23
PDE3B-205ENST00000534317 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
PDE3B-205ENST00000534317 ANKRD50Q9ULJ7 1429 aa22.71■■□□□ 1.23
PDE3B-205ENST00000534317 APPP05067 770 aa22.71■■□□□ 1.23
PDE3B-205ENST00000534317 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDE3B-205ENST00000534317 KIF21BO75037 1637 aa22.71■■□□□ 1.23
PDE3B-205ENST00000534317 HMOX1P09601 288 aa22.71■■□□□ 1.23
PDE3B-205ENST00000534317 VPS37CA5D8V6 355 aaPredicted RBP22.7■■□□□ 1.22
PDE3B-205ENST00000534317 TRDNQ13061 729 aa22.7■■□□□ 1.22
PDE3B-205ENST00000534317 WASHC2AQ641Q2 1341 aa22.7■■□□□ 1.22
PDE3B-205ENST00000534317 ERC2O15083 957 aa22.7■■□□□ 1.22
PDE3B-205ENST00000534317 ZNF592Q92610 1267 aa22.7■■□□□ 1.22
PDE3B-205ENST00000534317 AMOTL1Q8IY63 956 aa22.7■■□□□ 1.22
PDE3B-205ENST00000534317 GGNBP2Q9H3C7 697 aa22.69■■□□□ 1.22
PDE3B-205ENST00000534317 PSME1Q06323 249 aa22.69■■□□□ 1.22
PDE3B-205ENST00000534317 ADAMTS8Q9UP79 889 aa22.69■■□□□ 1.22
PDE3B-205ENST00000534317 NOL10Q9BSC4 688 aaKnown RBP22.68■■□□□ 1.22
PDE3B-205ENST00000534317 GPS2Q13227 327 aa22.68■■□□□ 1.22
PDE3B-205ENST00000534317 CDC45O75419 566 aa22.68■■□□□ 1.22
PDE3B-205ENST00000534317 CCDC70Q6NSX1 233 aa22.68■■□□□ 1.22
PDE3B-205ENST00000534317 HOOK1Q9UJC3 728 aaKnown RBP22.67■■□□□ 1.22
PDE3B-205ENST00000534317 ANKRD20A12PQ8NF67 263 aa22.66■■□□□ 1.22
PDE3B-205ENST00000534317 NFKBIBQ15653 356 aa22.65■■□□□ 1.22
PDE3B-205ENST00000534317 CCDC47Q96A33 483 aaKnown RBP22.65■■□□□ 1.22
PDE3B-205ENST00000534317 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
PDE3B-205ENST00000534317 IPO7O95373 1038 aaKnown RBP22.65■■□□□ 1.22
PDE3B-205ENST00000534317 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
PDE3B-205ENST00000534317 SASS6Q6UVJ0 657 aa22.64■■□□□ 1.21
PDE3B-205ENST00000534317 CABP2Q9NPB3 220 aa22.64■■□□□ 1.21
PDE3B-205ENST00000534317 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
PDE3B-205ENST00000534317 NFXL1Q6ZNB6 911 aa22.63■■□□□ 1.21
PDE3B-205ENST00000534317 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
PDE3B-205ENST00000534317 MTHFSP49914 203 aa22.62■■□□□ 1.21
PDE3B-205ENST00000534317 PCMTD1Q96MG8 357 aaPredicted RBP22.62■■□□□ 1.21
PDE3B-205ENST00000534317 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.62■■□□□ 1.21
PDE3B-205ENST00000534317 TCP11L2Q8N4U5 519 aa22.62■■□□□ 1.21
PDE3B-205ENST00000534317 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
PDE3B-205ENST00000534317 HOMER1Q86YM7 354 aa22.61■■□□□ 1.21
PDE3B-205ENST00000534317 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
PDE3B-205ENST00000534317 CCDC73Q6ZRK6 1079 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms