RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 MIA2Q96PC5 1412 aa8.4□□□□□ -1.06
ATPAF1-210ENST00000532925 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.06
ATPAF1-210ENST00000532925 ACIN1Q9UKV3 1341 aaKnown RBP8.4□□□□□ -1.06
ATPAF1-210ENST00000532925 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.06
ATPAF1-210ENST00000532925 ZNF454Q8N9F8 522 aa8.4□□□□□ -1.06
ATPAF1-210ENST00000532925 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.07
ATPAF1-210ENST00000532925 P3H3Q8IVL6 736 aa8.39□□□□□ -1.07
ATPAF1-210ENST00000532925 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
ATPAF1-210ENST00000532925 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
ATPAF1-210ENST00000532925 PTPN23Q9H3S7 1636 aa8.39□□□□□ -1.07
ATPAF1-210ENST00000532925 MAPKBP1O60336 1514 aa8.39□□□□□ -1.07
ATPAF1-210ENST00000532925 HFM1A2PYH4 1435 aa8.38□□□□□ -1.07
ATPAF1-210ENST00000532925 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
ATPAF1-210ENST00000532925 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
ATPAF1-210ENST00000532925 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
ATPAF1-210ENST00000532925 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
ATPAF1-210ENST00000532925 GCC2Q8IWJ2 1684 aa8.37□□□□□ -1.07
ATPAF1-210ENST00000532925 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATPAF1-210ENST00000532925 ADCY10Q96PN6 1610 aa8.36□□□□□ -1.07
ATPAF1-210ENST00000532925 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
ATPAF1-210ENST00000532925 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
ATPAF1-210ENST00000532925 CARMIL2Q6F5E8 1435 aa8.35□□□□□ -1.07
ATPAF1-210ENST00000532925 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 NUP153P49790 1475 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 FOSBP53539 338 aa8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 PTPN5P54829 565 aa8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 UACAQ9BZF9 1416 aa8.34□□□□□ -1.07
ATPAF1-210ENST00000532925 PDE4AP27815 886 aa8.33□□□□□ -1.08
ATPAF1-210ENST00000532925 EVI5O60447 810 aa8.32□□□□□ -1.08
ATPAF1-210ENST00000532925 PTPREP23469 700 aa8.32□□□□□ -1.08
ATPAF1-210ENST00000532925 FAM50AQ14320 339 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-210ENST00000532925 CDK13Q14004 1512 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-210ENST00000532925 DNMT1P26358 1616 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-210ENST00000532925 ABCA8O94911 1581 aa8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 TROQ12816 1431 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 NAIPQ13075 1403 aa8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 GTPBP6O43824 516 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 SLC24A1O60721 1099 aa8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 SLC4A5Q9BY07 1137 aa8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 CDK11AQ9UQ88 783 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 ROCK1Q13464 1354 aa8.31□□□□□ -1.08
ATPAF1-210ENST00000532925 BHMG1C9JSJ3 638 aaPredicted RBP8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 ZBED2Q9BTP6 218 aa8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 ADAM33Q9BZ11 813 aa8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 ATP1B4Q9UN42 357 aaPredicted RBP8.3□□□□□ -1.08
ATPAF1-210ENST00000532925 SHROOM2Q13796 1616 aa8.29□□□□□ -1.08
ATPAF1-210ENST00000532925 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
ATPAF1-210ENST00000532925 DDX27Q96GQ7 796 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-210ENST00000532925 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
ATPAF1-210ENST00000532925 THSD4Q6ZMP0 1018 aa8.28□□□□□ -1.08
ATPAF1-210ENST00000532925 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
ATPAF1-210ENST00000532925 CROCC2H7BZ55 1655 aa8.27□□□□□ -1.09
ATPAF1-210ENST00000532925 ADGBQ8N7X0 1667 aa8.27□□□□□ -1.09
ATPAF1-210ENST00000532925 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 KIF14Q15058 1648 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 MRPL50Q8N5N7 158 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 WNT2BQ93097 391 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 CHD1O14646 1710 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
ATPAF1-210ENST00000532925 ITGAEP38570 1179 aa8.25□□□□□ -1.09
ATPAF1-210ENST00000532925 MFSD10Q14728 455 aa8.25□□□□□ -1.09
ATPAF1-210ENST00000532925 DAPK1P53355 1430 aa8.25□□□□□ -1.09
ATPAF1-210ENST00000532925 PLB1Q6P1J6 1458 aa8.24□□□□□ -1.09
ATPAF1-210ENST00000532925 CENPBP07199 599 aaPredicted RBP8.23□□□□□ -1.09
ATPAF1-210ENST00000532925 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
ATPAF1-210ENST00000532925 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
ATPAF1-210ENST00000532925 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
ATPAF1-210ENST00000532925 ABCC5O15440 1437 aa8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 CADPS2Q86UW7 1296 aa8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 GPATCH8Q9UKJ3 1502 aaKnown RBP8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
ATPAF1-210ENST00000532925 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
ATPAF1-210ENST00000532925 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
ATPAF1-210ENST00000532925 ATP10BO94823 1461 aa8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 CLASP1Q7Z460 1538 aa8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 PPP1R3GB7ZBB8 358 aa8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 COL9A1P20849 921 aa8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 PREX2Q70Z35 1606 aa8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-210ENST00000532925 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
ATPAF1-210ENST00000532925 UHRF1BP1LA0JNW5 1464 aa8.19□□□□□ -1.1
ATPAF1-210ENST00000532925 ABCC2Q92887 1545 aa8.19□□□□□ -1.1
ATPAF1-210ENST00000532925 KDM5DQ9BY66 1539 aa8.19□□□□□ -1.1
ATPAF1-210ENST00000532925 KDM5BQ9UGL1 1544 aa8.19□□□□□ -1.1
ATPAF1-210ENST00000532925 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-210ENST00000532925 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
ATPAF1-210ENST00000532925 TONSLQ96HA7 1378 aa8.18□□□□□ -1.1
ATPAF1-210ENST00000532925 PTPRGP23470 1445 aa8.18□□□□□ -1.1
ATPAF1-210ENST00000532925 DENND4BO75064 1496 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-210ENST00000532925 A0A0G2JS52 829 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms