RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
CCS-206ENST00000530961 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
CCS-206ENST00000530961 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCS-206ENST00000530961 ARHGAP23Q9P227 1491 aa22.37■■□□□ 1.17
CCS-206ENST00000530961 LTKP29376 864 aa22.37■■□□□ 1.17
CCS-206ENST00000530961 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
CCS-206ENST00000530961 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
CCS-206ENST00000530961 POTEAQ6S8J7 498 aa22.36■■□□□ 1.17
CCS-206ENST00000530961 SLIT1O75093 1534 aa22.36■■□□□ 1.17
CCS-206ENST00000530961 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
CCS-206ENST00000530961 RPGRIP1LQ68CZ1 1315 aa22.33■■□□□ 1.17
CCS-206ENST00000530961 SCAF11Q99590 1463 aaKnown RBP22.33■■□□□ 1.16
CCS-206ENST00000530961 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
CCS-206ENST00000530961 DHX57Q6P158 1386 aaKnown RBP22.32■■□□□ 1.16
CCS-206ENST00000530961 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
CCS-206ENST00000530961 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
CCS-206ENST00000530961 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
CCS-206ENST00000530961 KDM5AP29375 1690 aaKnown RBP22.3■■□□□ 1.16
CCS-206ENST00000530961 MED14O60244 1454 aa22.3■■□□□ 1.16
CCS-206ENST00000530961 UBR1Q8IWV7 1749 aa22.3■■□□□ 1.16
CCS-206ENST00000530961 NPHP4O75161 1426 aaPredicted RBP22.3■■□□□ 1.16
CCS-206ENST00000530961 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
CCS-206ENST00000530961 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
CCS-206ENST00000530961 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
CCS-206ENST00000530961 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
CCS-206ENST00000530961 VGFO15240 615 aaPredicted RBP22.28■■□□□ 1.16
CCS-206ENST00000530961 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
CCS-206ENST00000530961 SPATA31E1Q6ZUB1 1445 aa22.27■■□□□ 1.16
CCS-206ENST00000530961 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
CCS-206ENST00000530961 BCANQ96GW7 911 aa22.25■■□□□ 1.15
CCS-206ENST00000530961 PLEKHG1Q9ULL1 1385 aa22.25■■□□□ 1.15
CCS-206ENST00000530961 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
CCS-206ENST00000530961 STAC3Q96MF2 364 aa22.21■■□□□ 1.15
CCS-206ENST00000530961 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
CCS-206ENST00000530961 UPF1Q92900 1129 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCS-206ENST00000530961 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
CCS-206ENST00000530961 SLC26A8Q96RN1 970 aa22.19■■□□□ 1.14
CCS-206ENST00000530961 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
CCS-206ENST00000530961 POLR1AO95602 1720 aaPredicted RBP22.16■■□□□ 1.14
CCS-206ENST00000530961 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.14
CCS-206ENST00000530961 NEUROD1Q13562 356 aa22.14■■□□□ 1.13
CCS-206ENST00000530961 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
CCS-206ENST00000530961 ADGRF5Q8IZF2 1346 aa22.13■■□□□ 1.13
CCS-206ENST00000530961 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
CCS-206ENST00000530961 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
CCS-206ENST00000530961 ADAMTS13Q76LX8 1427 aa22.11■■□□□ 1.13
CCS-206ENST00000530961 KCNA6P17658 529 aa22.1■■□□□ 1.13
CCS-206ENST00000530961 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
CCS-206ENST00000530961 KDM2AQ9Y2K7 1162 aa22.09■■□□□ 1.13
CCS-206ENST00000530961 PIK3R4Q99570 1358 aa22.09■■□□□ 1.13
CCS-206ENST00000530961 KIF1BO60333 1816 aa22.08■■□□□ 1.13
CCS-206ENST00000530961 IQGAP1P46940 1657 aa22.08■■□□□ 1.13
CCS-206ENST00000530961 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
CCS-206ENST00000530961 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
CCS-206ENST00000530961 SETBP1Q9Y6X0 1596 aa22.05■■□□□ 1.12
CCS-206ENST00000530961 MYOM2P54296 1465 aa22.05■■□□□ 1.12
CCS-206ENST00000530961 C14orf93Q9H972 538 aaKnown RBP22.05■■□□□ 1.12
CCS-206ENST00000530961 PIK3C2GO75747 1445 aa22.03■■□□□ 1.12
CCS-206ENST00000530961 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
CCS-206ENST00000530961 METP08581 1390 aa22.02■■□□□ 1.12
CCS-206ENST00000530961 AMOTL2Q9Y2J4 779 aa22.02■■□□□ 1.12
CCS-206ENST00000530961 DIP2AQ14689 1571 aa22.01■■□□□ 1.11
CCS-206ENST00000530961 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
CCS-206ENST00000530961 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
CCS-206ENST00000530961 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
CCS-206ENST00000530961 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
CCS-206ENST00000530961 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
CCS-206ENST00000530961 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
CCS-206ENST00000530961 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
CCS-206ENST00000530961 TMEM132EQ6IEE7 984 aa21.94■■□□□ 1.1
CCS-206ENST00000530961 PPLO60437 1756 aa21.94■■□□□ 1.1
CCS-206ENST00000530961 NKTRP30414 1462 aaKnown RBP21.93■■□□□ 1.1
CCS-206ENST00000530961 NRXN3Q9Y4C0 1643 aa21.93■■□□□ 1.1
CCS-206ENST00000530961 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
CCS-206ENST00000530961 PRAG1Q86YV5 1406 aa21.92■■□□□ 1.1
CCS-206ENST00000530961 LRPPRCP42704 1394 aaKnown RBP21.91■■□□□ 1.1
CCS-206ENST00000530961 TMEM94Q12767 1356 aa21.91■■□□□ 1.1
CCS-206ENST00000530961 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
CCS-206ENST00000530961 ZNF772Q68DY9 489 aaPredicted RBP21.91■■□□□ 1.1
CCS-206ENST00000530961 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.1
CCS-206ENST00000530961 SIRT1Q96EB6 747 aa21.89■■□□□ 1.09
CCS-206ENST00000530961 STK26Q9P289 416 aa21.89■■□□□ 1.09
CCS-206ENST00000530961 NWD1Q149M9 1564 aa21.88■■□□□ 1.09
CCS-206ENST00000530961 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
CCS-206ENST00000530961 YTHDC2Q9H6S0 1430 aaKnown RBP21.87■■□□□ 1.09
CCS-206ENST00000530961 RBM33Q96EV2 1170 aaKnown RBP21.86■■□□□ 1.09
CCS-206ENST00000530961 C14orf37Q86TY3 774 aa21.85■■□□□ 1.09
CCS-206ENST00000530961 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
CCS-206ENST00000530961 ROBO2Q9HCK4 1378 aa21.85■■□□□ 1.09
CCS-206ENST00000530961 TECPR2O15040 1411 aa21.84■■□□□ 1.09
CCS-206ENST00000530961 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
CCS-206ENST00000530961 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
CCS-206ENST00000530961 C19orf44Q9H6X5 657 aa21.84■■□□□ 1.09
CCS-206ENST00000530961 JCADQ9P266 1359 aa21.84■■□□□ 1.09
CCS-206ENST00000530961 RXRBP28702 533 aa21.82■■□□□ 1.08
CCS-206ENST00000530961 MEX3CQ5U5Q3 659 aaKnown RBP21.81■■□□□ 1.08
CCS-206ENST00000530961 TRAK1Q9UPV9 953 aa21.81■■□□□ 1.08
CCS-206ENST00000530961 MSH6P52701 1360 aa21.81■■□□□ 1.08
CCS-206ENST00000530961 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
CCS-206ENST00000530961 ADGRB1O14514 1584 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms