RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
SEC16B-208ENST00000528461 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
SEC16B-208ENST00000528461 WASHC2CQ9Y4E1 1318 aa18.63■□□□□ 0.57
SEC16B-208ENST00000528461 SCAF11Q99590 1463 aaKnown RBP18.63■□□□□ 0.57
SEC16B-208ENST00000528461 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
SEC16B-208ENST00000528461 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
SEC16B-208ENST00000528461 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
SEC16B-208ENST00000528461 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
SEC16B-208ENST00000528461 PIK3C2GO75747 1445 aa18.56■□□□□ 0.56
SEC16B-208ENST00000528461 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
SEC16B-208ENST00000528461 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
SEC16B-208ENST00000528461 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
SEC16B-208ENST00000528461 AGLP35573 1532 aa18.55■□□□□ 0.56
SEC16B-208ENST00000528461 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
SEC16B-208ENST00000528461 TMF1P82094 1093 aa18.54■□□□□ 0.56
SEC16B-208ENST00000528461 MYOM1P52179 1685 aa18.54■□□□□ 0.56
SEC16B-208ENST00000528461 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
SEC16B-208ENST00000528461 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
SEC16B-208ENST00000528461 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
SEC16B-208ENST00000528461 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
SEC16B-208ENST00000528461 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
SEC16B-208ENST00000528461 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.56
SEC16B-208ENST00000528461 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.55
SEC16B-208ENST00000528461 RPGRIP1LQ68CZ1 1315 aa18.5■□□□□ 0.55
SEC16B-208ENST00000528461 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
SEC16B-208ENST00000528461 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
SEC16B-208ENST00000528461 RALBP1Q15311 655 aa18.49■□□□□ 0.55
SEC16B-208ENST00000528461 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
SEC16B-208ENST00000528461 PANK3Q9H999 370 aa18.49■□□□□ 0.55
SEC16B-208ENST00000528461 IDI1Q13907 227 aa18.48■□□□□ 0.55
SEC16B-208ENST00000528461 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
SEC16B-208ENST00000528461 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
SEC16B-208ENST00000528461 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
SEC16B-208ENST00000528461 CHGAP10645 457 aaKnown RBP18.47■□□□□ 0.55
SEC16B-208ENST00000528461 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
SEC16B-208ENST00000528461 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
SEC16B-208ENST00000528461 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
SEC16B-208ENST00000528461 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
SEC16B-208ENST00000528461 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
SEC16B-208ENST00000528461 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
SEC16B-208ENST00000528461 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
SEC16B-208ENST00000528461 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
SEC16B-208ENST00000528461 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
SEC16B-208ENST00000528461 SLC52A1Q9NWF4 448 aa18.43■□□□□ 0.54
SEC16B-208ENST00000528461 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
SEC16B-208ENST00000528461 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
SEC16B-208ENST00000528461 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
SEC16B-208ENST00000528461 MYT1Q01538 1121 aa18.4■□□□□ 0.54
SEC16B-208ENST00000528461 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
SEC16B-208ENST00000528461 SPATA31D1Q6ZQQ2 1576 aa18.4■□□□□ 0.54
SEC16B-208ENST00000528461 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
SEC16B-208ENST00000528461 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
SEC16B-208ENST00000528461 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
SEC16B-208ENST00000528461 AMER1Q5JTC6 1135 aaPredicted RBP18.39■□□□□ 0.53
SEC16B-208ENST00000528461 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
SEC16B-208ENST00000528461 NUTM2DQ5VT03 806 aaPredicted RBP18.38■□□□□ 0.53
SEC16B-208ENST00000528461 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
SEC16B-208ENST00000528461 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
SEC16B-208ENST00000528461 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
SEC16B-208ENST00000528461 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
SEC16B-208ENST00000528461 FKBP8Q14318 412 aa18.35■□□□□ 0.53
SEC16B-208ENST00000528461 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
SEC16B-208ENST00000528461 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
SEC16B-208ENST00000528461 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
SEC16B-208ENST00000528461 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
SEC16B-208ENST00000528461 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
SEC16B-208ENST00000528461 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
SEC16B-208ENST00000528461 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
SEC16B-208ENST00000528461 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
SEC16B-208ENST00000528461 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
SEC16B-208ENST00000528461 ALKQ9UM73 1620 aa18.28■□□□□ 0.52
SEC16B-208ENST00000528461 INSRP06213 1382 aa18.28■□□□□ 0.52
SEC16B-208ENST00000528461 PTPRMP28827 1452 aa18.28■□□□□ 0.52
SEC16B-208ENST00000528461 MLECQ14165 292 aa18.27■□□□□ 0.52
SEC16B-208ENST00000528461 PPP2R1AP30153 589 aa18.27■□□□□ 0.51
SEC16B-208ENST00000528461 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
SEC16B-208ENST00000528461 BLMP54132 1417 aaPredicted RBP18.26■□□□□ 0.51
SEC16B-208ENST00000528461 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
SEC16B-208ENST00000528461 NRXN3Q9Y4C0 1643 aa18.24■□□□□ 0.51
SEC16B-208ENST00000528461 PUS7Q96PZ0 661 aaKnown RBP18.23■□□□□ 0.51
SEC16B-208ENST00000528461 BCANQ96GW7 911 aa18.22■□□□□ 0.51
SEC16B-208ENST00000528461 YTHDC2Q9H6S0 1430 aaKnown RBP18.22■□□□□ 0.51
SEC16B-208ENST00000528461 USP32Q8NFA0 1604 aa18.22■□□□□ 0.51
SEC16B-208ENST00000528461 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
SEC16B-208ENST00000528461 NEFLP07196 543 aa18.21■□□□□ 0.51
SEC16B-208ENST00000528461 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
SEC16B-208ENST00000528461 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
SEC16B-208ENST00000528461 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
SEC16B-208ENST00000528461 RNF123Q5XPI4 1314 aa18.18■□□□□ 0.5
SEC16B-208ENST00000528461 UBR1Q8IWV7 1749 aa18.17■□□□□ 0.5
SEC16B-208ENST00000528461 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
SEC16B-208ENST00000528461 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
SEC16B-208ENST00000528461 STK26Q9P289 416 aa18.17■□□□□ 0.5
SEC16B-208ENST00000528461 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
SEC16B-208ENST00000528461 ADAMTS8Q9UP79 889 aa18.16■□□□□ 0.5
SEC16B-208ENST00000528461 DLC1Q96QB1 1528 aa18.16■□□□□ 0.5
SEC16B-208ENST00000528461 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
SEC16B-208ENST00000528461 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
SEC16B-208ENST00000528461 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SEC16B-208ENST00000528461 TNRQ92752 1358 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms