RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCNC-216ENST00000523961 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
CCNC-216ENST00000523961 ZFYVE9O95405 1425 aa18.5■□□□□ 0.55
CCNC-216ENST00000523961 CLTCL1P53675 1640 aa18.5■□□□□ 0.55
CCNC-216ENST00000523961 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
CCNC-216ENST00000523961 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
CCNC-216ENST00000523961 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
CCNC-216ENST00000523961 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
CCNC-216ENST00000523961 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
CCNC-216ENST00000523961 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
CCNC-216ENST00000523961 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
CCNC-216ENST00000523961 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
CCNC-216ENST00000523961 KIF1BO60333 1816 aa18.44■□□□□ 0.54
CCNC-216ENST00000523961 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
CCNC-216ENST00000523961 BCANQ96GW7 911 aa18.44■□□□□ 0.54
CCNC-216ENST00000523961 NUTM2DQ5VT03 806 aaPredicted RBP18.42■□□□□ 0.54
CCNC-216ENST00000523961 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
CCNC-216ENST00000523961 RPGRIP1LQ68CZ1 1315 aa18.41■□□□□ 0.54
CCNC-216ENST00000523961 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
CCNC-216ENST00000523961 CPS1P31327 1500 aa18.39■□□□□ 0.53
CCNC-216ENST00000523961 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
CCNC-216ENST00000523961 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
CCNC-216ENST00000523961 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
CCNC-216ENST00000523961 SPATA31E1Q6ZUB1 1445 aa18.37■□□□□ 0.53
CCNC-216ENST00000523961 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
CCNC-216ENST00000523961 IQSEC2Q5JU85 1478 aa18.36■□□□□ 0.53
CCNC-216ENST00000523961 FBXO41Q8TF61 875 aa18.35■□□□□ 0.53
CCNC-216ENST00000523961 ADAMTS13Q76LX8 1427 aa18.34■□□□□ 0.53
CCNC-216ENST00000523961 KCNA6P17658 529 aa18.34■□□□□ 0.53
CCNC-216ENST00000523961 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
CCNC-216ENST00000523961 SETBP1Q9Y6X0 1596 aa18.32■□□□□ 0.52
CCNC-216ENST00000523961 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
CCNC-216ENST00000523961 STRCP1A6NGW2 1772 aa18.3■□□□□ 0.52
CCNC-216ENST00000523961 PPLO60437 1756 aa18.3■□□□□ 0.52
CCNC-216ENST00000523961 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
CCNC-216ENST00000523961 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
CCNC-216ENST00000523961 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
CCNC-216ENST00000523961 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
CCNC-216ENST00000523961 NWD1Q149M9 1564 aa18.27■□□□□ 0.52
CCNC-216ENST00000523961 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
CCNC-216ENST00000523961 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
CCNC-216ENST00000523961 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
CCNC-216ENST00000523961 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
CCNC-216ENST00000523961 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
CCNC-216ENST00000523961 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
CCNC-216ENST00000523961 METP08581 1390 aa18.23■□□□□ 0.51
CCNC-216ENST00000523961 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
CCNC-216ENST00000523961 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
CCNC-216ENST00000523961 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
CCNC-216ENST00000523961 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
CCNC-216ENST00000523961 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
CCNC-216ENST00000523961 MYOM2P54296 1465 aa18.21■□□□□ 0.51
CCNC-216ENST00000523961 TOM1O60784 492 aa18.21■□□□□ 0.51
CCNC-216ENST00000523961 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
CCNC-216ENST00000523961 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
CCNC-216ENST00000523961 DCAF11Q8TEB1 546 aa18.19■□□□□ 0.5
CCNC-216ENST00000523961 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
CCNC-216ENST00000523961 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
CCNC-216ENST00000523961 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
CCNC-216ENST00000523961 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
CCNC-216ENST00000523961 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
CCNC-216ENST00000523961 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
CCNC-216ENST00000523961 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
CCNC-216ENST00000523961 XIRP1Q702N8 1843 aaKnown RBP18.16■□□□□ 0.5
CCNC-216ENST00000523961 MSH6P52701 1360 aa18.15■□□□□ 0.5
CCNC-216ENST00000523961 C14orf37Q86TY3 774 aa18.14■□□□□ 0.49
CCNC-216ENST00000523961 SIN3AQ96ST3 1273 aa18.14■□□□□ 0.49
CCNC-216ENST00000523961 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
CCNC-216ENST00000523961 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
CCNC-216ENST00000523961 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
CCNC-216ENST00000523961 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
CCNC-216ENST00000523961 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
CCNC-216ENST00000523961 PRAG1Q86YV5 1406 aa18.12■□□□□ 0.49
CCNC-216ENST00000523961 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
CCNC-216ENST00000523961 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
CCNC-216ENST00000523961 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
CCNC-216ENST00000523961 LAMC1P11047 1609 aa18.11■□□□□ 0.49
CCNC-216ENST00000523961 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
CCNC-216ENST00000523961 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
CCNC-216ENST00000523961 STK26Q9P289 416 aa18.09■□□□□ 0.49
CCNC-216ENST00000523961 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.49
CCNC-216ENST00000523961 L3MBTL2Q969R5 705 aa18.08■□□□□ 0.48
CCNC-216ENST00000523961 TECPR2O15040 1411 aa18.07■□□□□ 0.48
CCNC-216ENST00000523961 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
CCNC-216ENST00000523961 ATF3P18847 181 aa18.07■□□□□ 0.48
CCNC-216ENST00000523961 CADPS2Q86UW7 1296 aa18.07■□□□□ 0.48
CCNC-216ENST00000523961 DCCP43146 1447 aa18.06■□□□□ 0.48
CCNC-216ENST00000523961 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
CCNC-216ENST00000523961 SLAIN2Q9P270 581 aa18.05■□□□□ 0.48
CCNC-216ENST00000523961 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
CCNC-216ENST00000523961 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
CCNC-216ENST00000523961 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
CCNC-216ENST00000523961 ADGRB1O14514 1584 aa18.03■□□□□ 0.48
CCNC-216ENST00000523961 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
CCNC-216ENST00000523961 WAPLQ7Z5K2 1190 aa18.01■□□□□ 0.47
CCNC-216ENST00000523961 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
CCNC-216ENST00000523961 POTEDQ86YR6 584 aa18■□□□□ 0.47
CCNC-216ENST00000523961 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
CCNC-216ENST00000523961 NALCNQ8IZF0 1738 aa17.99■□□□□ 0.47
CCNC-216ENST00000523961 HSPA1LP34931 641 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms