RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
PABPC1-213ENST00000519848 UGGT1Q9NYU2 1555 aa13.73□□□□□ -0.21
PABPC1-213ENST00000519848 SYNMO15061 1565 aa13.72□□□□□ -0.21
PABPC1-213ENST00000519848 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
PABPC1-213ENST00000519848 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
PABPC1-213ENST00000519848 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.21
PABPC1-213ENST00000519848 NLRP1Q9C000 1473 aa13.71□□□□□ -0.21
PABPC1-213ENST00000519848 PIK3C2BO00750 1634 aa13.71□□□□□ -0.22
PABPC1-213ENST00000519848 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
PABPC1-213ENST00000519848 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
PABPC1-213ENST00000519848 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
PABPC1-213ENST00000519848 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
PABPC1-213ENST00000519848 MED14O60244 1454 aa13.68□□□□□ -0.22
PABPC1-213ENST00000519848 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
PABPC1-213ENST00000519848 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
PABPC1-213ENST00000519848 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
PABPC1-213ENST00000519848 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
PABPC1-213ENST00000519848 LMTK2Q8IWU2 1503 aa13.67□□□□□ -0.22
PABPC1-213ENST00000519848 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
PABPC1-213ENST00000519848 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
PABPC1-213ENST00000519848 NPHP4O75161 1426 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-213ENST00000519848 ARHGAP31Q2M1Z3 1444 aa13.65□□□□□ -0.22
PABPC1-213ENST00000519848 PKD2Q13563 968 aa13.65□□□□□ -0.22
PABPC1-213ENST00000519848 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
PABPC1-213ENST00000519848 SLIT1O75093 1534 aa13.64□□□□□ -0.23
PABPC1-213ENST00000519848 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
PABPC1-213ENST00000519848 UNC13BO14795 1591 aa13.63□□□□□ -0.23
PABPC1-213ENST00000519848 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
PABPC1-213ENST00000519848 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-213ENST00000519848 CPS1P31327 1500 aa13.61□□□□□ -0.23
PABPC1-213ENST00000519848 CLCN6P51797 869 aa13.61□□□□□ -0.23
PABPC1-213ENST00000519848 NOS1P29475 1434 aa13.61□□□□□ -0.23
PABPC1-213ENST00000519848 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
PABPC1-213ENST00000519848 LTKP29376 864 aa13.6□□□□□ -0.23
PABPC1-213ENST00000519848 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
PABPC1-213ENST00000519848 E9PCH4 1651 aa13.59□□□□□ -0.23
PABPC1-213ENST00000519848 TET3O43151 1660 aa13.59□□□□□ -0.23
PABPC1-213ENST00000519848 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
PABPC1-213ENST00000519848 GCC2Q8IWJ2 1684 aa13.59□□□□□ -0.23
PABPC1-213ENST00000519848 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
PABPC1-213ENST00000519848 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.24
PABPC1-213ENST00000519848 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
PABPC1-213ENST00000519848 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
PABPC1-213ENST00000519848 ANKRD50Q9ULJ7 1429 aa13.56□□□□□ -0.24
PABPC1-213ENST00000519848 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
PABPC1-213ENST00000519848 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
PABPC1-213ENST00000519848 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
PABPC1-213ENST00000519848 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
PABPC1-213ENST00000519848 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
PABPC1-213ENST00000519848 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-213ENST00000519848 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-213ENST00000519848 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
PABPC1-213ENST00000519848 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
PABPC1-213ENST00000519848 IDI1Q13907 227 aa13.52□□□□□ -0.25
PABPC1-213ENST00000519848 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
PABPC1-213ENST00000519848 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
PABPC1-213ENST00000519848 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
PABPC1-213ENST00000519848 HSPA1LP34931 641 aa13.5□□□□□ -0.25
PABPC1-213ENST00000519848 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
PABPC1-213ENST00000519848 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
PABPC1-213ENST00000519848 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
PABPC1-213ENST00000519848 KANK1Q14678 1352 aa13.47□□□□□ -0.25
PABPC1-213ENST00000519848 NRXN3Q9Y4C0 1643 aa13.47□□□□□ -0.25
PABPC1-213ENST00000519848 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
PABPC1-213ENST00000519848 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
PABPC1-213ENST00000519848 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
PABPC1-213ENST00000519848 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
PABPC1-213ENST00000519848 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
PABPC1-213ENST00000519848 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
PABPC1-213ENST00000519848 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
PABPC1-213ENST00000519848 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
PABPC1-213ENST00000519848 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
PABPC1-213ENST00000519848 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
PABPC1-213ENST00000519848 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
PABPC1-213ENST00000519848 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
PABPC1-213ENST00000519848 POTEMA6NI47 508 aa13.41□□□□□ -0.26
PABPC1-213ENST00000519848 ITGAEP38570 1179 aa13.41□□□□□ -0.26
PABPC1-213ENST00000519848 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
PABPC1-213ENST00000519848 TMEM94Q12767 1356 aa13.41□□□□□ -0.26
PABPC1-213ENST00000519848 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-213ENST00000519848 NKTRP30414 1462 aaKnown RBP13.4□□□□□ -0.26
PABPC1-213ENST00000519848 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
PABPC1-213ENST00000519848 NAIPQ13075 1403 aa13.39□□□□□ -0.27
PABPC1-213ENST00000519848 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
PABPC1-213ENST00000519848 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-213ENST00000519848 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
PABPC1-213ENST00000519848 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
PABPC1-213ENST00000519848 TOM1O60784 492 aa13.37□□□□□ -0.27
PABPC1-213ENST00000519848 NUP155O75694 1391 aa13.36□□□□□ -0.27
PABPC1-213ENST00000519848 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
PABPC1-213ENST00000519848 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
PABPC1-213ENST00000519848 TRPM2O94759 1503 aa13.34□□□□□ -0.27
PABPC1-213ENST00000519848 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-213ENST00000519848 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
PABPC1-213ENST00000519848 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
PABPC1-213ENST00000519848 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
PABPC1-213ENST00000519848 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
PABPC1-213ENST00000519848 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-213ENST00000519848 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
PABPC1-213ENST00000519848 SOCS7O14512 581 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms