RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
MCPH1-203ENST00000519480 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
MCPH1-203ENST00000519480 USP47Q96K76 1375 aa14.04□□□□□ -0.16
MCPH1-203ENST00000519480 MIER1Q8N108 512 aa14.04□□□□□ -0.16
MCPH1-203ENST00000519480 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
MCPH1-203ENST00000519480 ARHGAP31Q2M1Z3 1444 aa14.03□□□□□ -0.16
MCPH1-203ENST00000519480 RALGAPBQ86X10 1494 aa14.03□□□□□ -0.16
MCPH1-203ENST00000519480 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
MCPH1-203ENST00000519480 MYO5BQ9ULV0 1848 aa14.02□□□□□ -0.16
MCPH1-203ENST00000519480 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.17
MCPH1-203ENST00000519480 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
MCPH1-203ENST00000519480 ERVK-7P63135 1459 aa14.01□□□□□ -0.17
MCPH1-203ENST00000519480 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
MCPH1-203ENST00000519480 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
MCPH1-203ENST00000519480 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
MCPH1-203ENST00000519480 ADGRB3O60242 1522 aa14□□□□□ -0.17
MCPH1-203ENST00000519480 MADDQ8WXG6 1647 aa14□□□□□ -0.17
MCPH1-203ENST00000519480 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
MCPH1-203ENST00000519480 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
MCPH1-203ENST00000519480 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
MCPH1-203ENST00000519480 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
MCPH1-203ENST00000519480 IFT172Q9UG01 1749 aa13.96□□□□□ -0.18
MCPH1-203ENST00000519480 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
MCPH1-203ENST00000519480 PPLO60437 1756 aa13.95□□□□□ -0.18
MCPH1-203ENST00000519480 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
MCPH1-203ENST00000519480 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
MCPH1-203ENST00000519480 FER1L4A9Z1Z3 1794 aa13.95□□□□□ -0.18
MCPH1-203ENST00000519480 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
MCPH1-203ENST00000519480 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
MCPH1-203ENST00000519480 CCDC7Q96M83 1385 aa13.93□□□□□ -0.18
MCPH1-203ENST00000519480 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
MCPH1-203ENST00000519480 TNRQ92752 1358 aa13.92□□□□□ -0.18
MCPH1-203ENST00000519480 MYOM2P54296 1465 aa13.92□□□□□ -0.18
MCPH1-203ENST00000519480 GPRASP1Q5JY77 1395 aa13.91□□□□□ -0.18
MCPH1-203ENST00000519480 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
MCPH1-203ENST00000519480 C3P01024 1663 aa13.9□□□□□ -0.18
MCPH1-203ENST00000519480 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
MCPH1-203ENST00000519480 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
MCPH1-203ENST00000519480 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
MCPH1-203ENST00000519480 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
MCPH1-203ENST00000519480 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
MCPH1-203ENST00000519480 STK26Q9P289 416 aa13.88□□□□□ -0.19
MCPH1-203ENST00000519480 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
MCPH1-203ENST00000519480 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
MCPH1-203ENST00000519480 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
MCPH1-203ENST00000519480 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
MCPH1-203ENST00000519480 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
MCPH1-203ENST00000519480 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
MCPH1-203ENST00000519480 TESK2Q96S53 571 aa13.87□□□□□ -0.19
MCPH1-203ENST00000519480 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
MCPH1-203ENST00000519480 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
MCPH1-203ENST00000519480 BCANQ96GW7 911 aa13.86□□□□□ -0.19
MCPH1-203ENST00000519480 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
MCPH1-203ENST00000519480 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
MCPH1-203ENST00000519480 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
MCPH1-203ENST00000519480 LAMC1P11047 1609 aa13.84□□□□□ -0.19
MCPH1-203ENST00000519480 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.19
MCPH1-203ENST00000519480 KIAA1210Q9ULL0 1709 aa13.83□□□□□ -0.19
MCPH1-203ENST00000519480 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
MCPH1-203ENST00000519480 ANP32CO43423 234 aa13.82□□□□□ -0.2
MCPH1-203ENST00000519480 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
MCPH1-203ENST00000519480 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
MCPH1-203ENST00000519480 LTKP29376 864 aa13.8□□□□□ -0.2
MCPH1-203ENST00000519480 TMF1P82094 1093 aa13.8□□□□□ -0.2
MCPH1-203ENST00000519480 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
MCPH1-203ENST00000519480 ZFYVE9O95405 1425 aa13.79□□□□□ -0.2
MCPH1-203ENST00000519480 ASXL1Q8IXJ9 1541 aa13.79□□□□□ -0.2
MCPH1-203ENST00000519480 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
MCPH1-203ENST00000519480 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
MCPH1-203ENST00000519480 TMEM2Q9UHN6 1383 aa13.78□□□□□ -0.2
MCPH1-203ENST00000519480 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
MCPH1-203ENST00000519480 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
MCPH1-203ENST00000519480 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
MCPH1-203ENST00000519480 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
MCPH1-203ENST00000519480 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
MCPH1-203ENST00000519480 PTPRMP28827 1452 aa13.76□□□□□ -0.21
MCPH1-203ENST00000519480 NLRP1Q9C000 1473 aa13.76□□□□□ -0.21
MCPH1-203ENST00000519480 MYO3AQ8NEV4 1616 aa13.76□□□□□ -0.21
MCPH1-203ENST00000519480 HOMEZQ8IX15 550 aa13.76□□□□□ -0.21
MCPH1-203ENST00000519480 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
MCPH1-203ENST00000519480 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
MCPH1-203ENST00000519480 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
MCPH1-203ENST00000519480 METP08581 1390 aa13.75□□□□□ -0.21
MCPH1-203ENST00000519480 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
MCPH1-203ENST00000519480 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
MCPH1-203ENST00000519480 YTHDC2Q9H6S0 1430 aaKnown RBP13.74□□□□□ -0.21
MCPH1-203ENST00000519480 NRXN3Q9Y4C0 1643 aa13.74□□□□□ -0.21
MCPH1-203ENST00000519480 PANK3Q9H999 370 aa13.74□□□□□ -0.21
MCPH1-203ENST00000519480 POGKQ9P215 609 aa13.74□□□□□ -0.21
MCPH1-203ENST00000519480 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
MCPH1-203ENST00000519480 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
MCPH1-203ENST00000519480 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
MCPH1-203ENST00000519480 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
MCPH1-203ENST00000519480 CCDC184Q52MB2 194 aa13.72□□□□□ -0.21
MCPH1-203ENST00000519480 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
MCPH1-203ENST00000519480 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.21
MCPH1-203ENST00000519480 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
MCPH1-203ENST00000519480 PRKRIP1Q9H875 184 aaPredicted RBP13.71□□□□□ -0.21
MCPH1-203ENST00000519480 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
MCPH1-203ENST00000519480 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms