RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
LINC00535-202ENST00000517785 PDCD7Q8N8D1 485 aaKnown RBP9.55□□□□□ -0.88
LINC00535-202ENST00000517785 ALKQ9UM73 1620 aa9.55□□□□□ -0.88
LINC00535-202ENST00000517785 GOLGA2Q08379 1002 aa9.54□□□□□ -0.88
LINC00535-202ENST00000517785 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
LINC00535-202ENST00000517785 ABCC1P33527 1531 aa9.54□□□□□ -0.88
LINC00535-202ENST00000517785 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-202ENST00000517785 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-202ENST00000517785 SHANK2Q9UPX8 1470 aa9.53□□□□□ -0.88
LINC00535-202ENST00000517785 CPS1P31327 1500 aa9.52□□□□□ -0.88
LINC00535-202ENST00000517785 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
LINC00535-202ENST00000517785 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
LINC00535-202ENST00000517785 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
LINC00535-202ENST00000517785 SETD1AO15047 1707 aaKnown RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 ST18O60284 1047 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 DNMT1P26358 1616 aaKnown RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 PREX2Q70Z35 1606 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC00535-202ENST00000517785 CLIP1P30622 1438 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 GGT6Q6P531 493 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
LINC00535-202ENST00000517785 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 VWDEQ8N2E2 1590 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
LINC00535-202ENST00000517785 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
LINC00535-202ENST00000517785 L3MBTL3Q96JM7 780 aaPredicted RBP9.48□□□□□ -0.89
LINC00535-202ENST00000517785 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
LINC00535-202ENST00000517785 CDC42BPAQ5VT25 1732 aa9.47□□□□□ -0.89
LINC00535-202ENST00000517785 STRCP1A6NGW2 1772 aa9.47□□□□□ -0.89
LINC00535-202ENST00000517785 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.89
LINC00535-202ENST00000517785 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
LINC00535-202ENST00000517785 SPAG9O60271 1321 aaKnown RBP9.46□□□□□ -0.9
LINC00535-202ENST00000517785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00535-202ENST00000517785 FMN1Q68DA7 1419 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 ATP7AQ04656 1500 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
LINC00535-202ENST00000517785 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00535-202ENST00000517785 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
LINC00535-202ENST00000517785 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 A2MP01023 1474 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
LINC00535-202ENST00000517785 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
LINC00535-202ENST00000517785 SNPHO15079 494 aa9.43□□□□□ -0.9
LINC00535-202ENST00000517785 INO80Q9ULG1 1556 aaPredicted RBP9.42□□□□□ -0.9
LINC00535-202ENST00000517785 ARHGAP35Q9NRY4 1499 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 TNRQ92752 1358 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
LINC00535-202ENST00000517785 SYNMO15061 1565 aa9.4□□□□□ -0.9
LINC00535-202ENST00000517785 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
LINC00535-202ENST00000517785 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
LINC00535-202ENST00000517785 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 EEA1Q15075 1411 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
LINC00535-202ENST00000517785 FAM135AQ9P2D6 1515 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 MED14O60244 1454 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 SRCAPQ6ZRS2 3230 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 PZPP20742 1482 aa9.36□□□□□ -0.91
LINC00535-202ENST00000517785 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
LINC00535-202ENST00000517785 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
LINC00535-202ENST00000517785 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
LINC00535-202ENST00000517785 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
LINC00535-202ENST00000517785 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC00535-202ENST00000517785 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 KIF3BO15066 747 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 TRIM52Q96A61 297 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 ZC3H13Q5T200 1668 aaKnown RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 CFAP65Q6ZU64 1925 aaKnown RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 KDM5DQ9BY66 1539 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 ROBO1Q9Y6N7 1651 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 G3V3G9 751 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 RIOK3O14730 519 aaKnown RBP9.33□□□□□ -0.92
LINC00535-202ENST00000517785 CFDP1Q9UEE9 299 aaPredicted RBP9.33□□□□□ -0.92
LINC00535-202ENST00000517785 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
LINC00535-202ENST00000517785 PLEKHH2Q8IVE3 1493 aa9.32□□□□□ -0.92
LINC00535-202ENST00000517785 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
LINC00535-202ENST00000517785 CASKIN1Q8WXD9 1431 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
LINC00535-202ENST00000517785 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 DHX29Q7Z478 1369 aaKnown RBP9.3□□□□□ -0.92
LINC00535-202ENST00000517785 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
LINC00535-202ENST00000517785 PHLPP1O60346 1717 aa9.29□□□□□ -0.92
LINC00535-202ENST00000517785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
LINC00535-202ENST00000517785 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
LINC00535-202ENST00000517785 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
LINC00535-202ENST00000517785 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
LINC00535-202ENST00000517785 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms