RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CHGAP10645 457 aaKnown RBP36.38■■■■□ 3.41
COL13A1-210ENST00000517713 NRXN1Q9ULB1 1477 aa36.35■■■■□ 3.41
COL13A1-210ENST00000517713 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
COL13A1-210ENST00000517713 HNRNPUQ00839 825 aaKnown RBP eCLIP36.33■■■■□ 3.41
COL13A1-210ENST00000517713 CNGB1Q14028 1251 aaPredicted RBP36.33■■■■□ 3.41
COL13A1-210ENST00000517713 CFAP70Q5T0N1 1121 aa36.32■■■■□ 3.4
COL13A1-210ENST00000517713 SYNMO15061 1565 aa36.31■■■■□ 3.4
COL13A1-210ENST00000517713 PIK3C2BO00750 1634 aa36.31■■■■□ 3.4
COL13A1-210ENST00000517713 PPLO60437 1756 aa36.29■■■■□ 3.4
COL13A1-210ENST00000517713 EIF3AQ14152 1382 aaKnown RBP36.29■■■■□ 3.4
COL13A1-210ENST00000517713 REREQ9P2R6 1566 aa36.29■■■■□ 3.4
COL13A1-210ENST00000517713 RPGRIP1LQ68CZ1 1315 aa36.28■■■■□ 3.4
COL13A1-210ENST00000517713 FAM9BQ8IZU0 186 aa36.28■■■■□ 3.4
COL13A1-210ENST00000517713 KTN1Q86UP2 1357 aaKnown RBP36.27■■■■□ 3.4
COL13A1-210ENST00000517713 AGLP35573 1532 aa36.23■■■■□ 3.39
COL13A1-210ENST00000517713 RALBP1Q15311 655 aa36.22■■■■□ 3.39
COL13A1-210ENST00000517713 PER1O15534 1290 aaPredicted RBP36.2■■■■□ 3.39
COL13A1-210ENST00000517713 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
COL13A1-210ENST00000517713 CDCA8Q53HL2 280 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 PREX1Q8TCU6 1659 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 SETBP1Q9Y6X0 1596 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 SLC52A1Q9NWF4 448 aa36.17■■■■□ 3.38
COL13A1-210ENST00000517713 PANK3Q9H999 370 aa36.17■■■■□ 3.38
COL13A1-210ENST00000517713 IDI1Q13907 227 aa36.15■■■■□ 3.38
COL13A1-210ENST00000517713 MYBBP1AQ9BQG0 1328 aaKnown RBP36.15■■■■□ 3.38
COL13A1-210ENST00000517713 PPP6R1Q9UPN7 881 aa36.15■■■■□ 3.38
COL13A1-210ENST00000517713 C14orf93Q9H972 538 aaKnown RBP36.13■■■■□ 3.38
COL13A1-210ENST00000517713 SLC24A1O60721 1099 aa36.12■■■■□ 3.37
COL13A1-210ENST00000517713 NEXMIFQ5QGS0 1516 aa36.11■■■■□ 3.37
COL13A1-210ENST00000517713 PARD3Q8TEW0 1356 aa36.1■■■■□ 3.37
COL13A1-210ENST00000517713 TMC1Q8TDI8 760 aa36.1■■■■□ 3.37
COL13A1-210ENST00000517713 ARHGEF40Q8TER5 1519 aa36.09■■■■□ 3.37
COL13A1-210ENST00000517713 SUPT16HQ9Y5B9 1047 aaKnown RBP36.09■■■■□ 3.37
COL13A1-210ENST00000517713 BRD4O60885 1362 aaPredicted RBP36.09■■■■□ 3.37
COL13A1-210ENST00000517713 VGFO15240 615 aaPredicted RBP36.08■■■■□ 3.37
COL13A1-210ENST00000517713 MYO3AQ8NEV4 1616 aa36.08■■■■□ 3.37
COL13A1-210ENST00000517713 ADGRB1O14514 1584 aa36.05■■■■□ 3.36
COL13A1-210ENST00000517713 KDM5AP29375 1690 aaKnown RBP36.04■■■■□ 3.36
COL13A1-210ENST00000517713 ERVK-7P63135 1459 aa36.04■■■■□ 3.36
COL13A1-210ENST00000517713 PNISRQ8TF01 805 aaKnown RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 CLTCQ00610 1675 aaKnown RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 FBXO31Q5XUX0 539 aaPredicted RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 ZBED9Q6R2W3 1325 aa36.03■■■■□ 3.36
COL13A1-210ENST00000517713 TMEM131LA2VDJ0 1609 aa36.02■■■■□ 3.36
COL13A1-210ENST00000517713 NUTM2DQ5VT03 806 aaPredicted RBP36■■■■□ 3.35
COL13A1-210ENST00000517713 MYO5BQ9ULV0 1848 aa36■■■■□ 3.35
COL13A1-210ENST00000517713 SBNO2Q9Y2G9 1366 aa35.99■■■■□ 3.35
COL13A1-210ENST00000517713 ZFYVE9O95405 1425 aa35.99■■■■□ 3.35
COL13A1-210ENST00000517713 MYOM1P52179 1685 aa35.98■■■■□ 3.35
COL13A1-210ENST00000517713 CC2D1BQ5T0F9 858 aaKnown RBP35.98■■■■□ 3.35
COL13A1-210ENST00000517713 NLRP13Q86W25 1043 aa35.98■■■■□ 3.35
COL13A1-210ENST00000517713 CENPJQ9HC77 1338 aaPredicted RBP35.98■■■■□ 3.35
COL13A1-210ENST00000517713 TRAK1Q9UPV9 953 aa35.96■■■■□ 3.35
COL13A1-210ENST00000517713 TMEM132EQ6IEE7 984 aa35.96■■■■□ 3.35
COL13A1-210ENST00000517713 MLECQ14165 292 aa35.95■■■■□ 3.34
COL13A1-210ENST00000517713 KNSTRNQ9Y448 316 aa35.93■■■■□ 3.34
COL13A1-210ENST00000517713 LRPPRCP42704 1394 aaKnown RBP35.91■■■■□ 3.34
COL13A1-210ENST00000517713 SPATA31D1Q6ZQQ2 1576 aa35.89■■■■□ 3.34
COL13A1-210ENST00000517713 QRICH2Q9H0J4 1663 aa35.89■■■■□ 3.34
COL13A1-210ENST00000517713 NEFLP07196 543 aa35.88■■■■□ 3.33
COL13A1-210ENST00000517713 FKBP8Q14318 412 aa35.88■■■■□ 3.33
COL13A1-210ENST00000517713 AMER1Q5JTC6 1135 aaPredicted RBP35.84■■■■□ 3.33
COL13A1-210ENST00000517713 STAG3Q9UJ98 1225 aa35.84■■■■□ 3.33
COL13A1-210ENST00000517713 ASXL1Q8IXJ9 1541 aa35.83■■■■□ 3.33
COL13A1-210ENST00000517713 ESF1Q9H501 851 aaKnown RBP35.81■■■■□ 3.32
COL13A1-210ENST00000517713 ARHGEF28Q8N1W1 1705 aaKnown RBP35.81■■■■□ 3.32
COL13A1-210ENST00000517713 NPC1L1Q9UHC9 1359 aa35.78■■■■□ 3.32
COL13A1-210ENST00000517713 ZMYM3Q14202 1370 aa35.75■■■■□ 3.31
COL13A1-210ENST00000517713 A2ML1A8K2U0 1454 aa35.75■■■■□ 3.31
COL13A1-210ENST00000517713 SENP3Q9H4L4 574 aaPredicted RBP35.7■■■■□ 3.31
COL13A1-210ENST00000517713 PPP2R1AP30153 589 aa35.69■■■■□ 3.3
COL13A1-210ENST00000517713 CARD14Q9BXL6 1004 aa35.68■■■■□ 3.3
COL13A1-210ENST00000517713 ALKQ9UM73 1620 aa35.68■■■■□ 3.3
COL13A1-210ENST00000517713 PUS7Q96PZ0 661 aaKnown RBP35.67■■■■□ 3.3
COL13A1-210ENST00000517713 EVC2Q86UK5 1308 aa35.67■■■■□ 3.3
COL13A1-210ENST00000517713 STK26Q9P289 416 aa35.66■■■■□ 3.3
COL13A1-210ENST00000517713 SMG6Q86US8 1419 aaKnown RBP35.65■■■■□ 3.3
COL13A1-210ENST00000517713 RIMS2Q9UQ26 1411 aa35.65■■■■□ 3.3
COL13A1-210ENST00000517713 INSRP06213 1382 aa35.64■■■■□ 3.3
COL13A1-210ENST00000517713 BCANQ96GW7 911 aa35.64■■■■□ 3.3
COL13A1-210ENST00000517713 TULP4Q9NRJ4 1543 aa35.63■■■■□ 3.29
COL13A1-210ENST00000517713 YTHDC2Q9H6S0 1430 aaKnown RBP35.63■■■■□ 3.29
COL13A1-210ENST00000517713 PTPRMP28827 1452 aa35.61■■■■□ 3.29
COL13A1-210ENST00000517713 SENP3-EIF4A1A0A087X0R7 540 aa35.6■■■■□ 3.29
COL13A1-210ENST00000517713 SLC12A5Q9H2X9 1139 aa35.6■■■■□ 3.29
COL13A1-210ENST00000517713 NUDCQ9Y266 331 aa35.58■■■■□ 3.29
COL13A1-210ENST00000517713 SAFB2Q14151 953 aaKnown RBP eCLIP35.57■■■■□ 3.28
COL13A1-210ENST00000517713 TNRQ92752 1358 aa35.57■■■■□ 3.28
COL13A1-210ENST00000517713 BLMP54132 1417 aaPredicted RBP35.56■■■■□ 3.28
COL13A1-210ENST00000517713 NSD3Q9BZ95 1437 aa35.54■■■■□ 3.28
COL13A1-210ENST00000517713 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.53■■■■□ 3.28
COL13A1-210ENST00000517713 PRAM1Q96QH2 718 aa35.53■■■■□ 3.28
COL13A1-210ENST00000517713 POGKQ9P215 609 aa35.52■■■■□ 3.28
COL13A1-210ENST00000517713 PELP1Q8IZL8 1130 aaKnown RBP35.5■■■■□ 3.27
COL13A1-210ENST00000517713 CABP2Q9NPB3 220 aa35.5■■■■□ 3.27
COL13A1-210ENST00000517713 SETD1AO15047 1707 aaKnown RBP35.49■■■■□ 3.27
COL13A1-210ENST00000517713 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
COL13A1-210ENST00000517713 ADAMTS8Q9UP79 889 aa35.47■■■■□ 3.27
COL13A1-210ENST00000517713 USP32Q8NFA0 1604 aa35.47■■■■□ 3.27
COL13A1-210ENST00000517713 IRX6P78412 446 aaPredicted RBP35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms