RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 IPO9Q96P70 1041 aaKnown RBP8.87□□□□□ -0.99
CDH12-203ENST00000517378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDH12-203ENST00000517378 BCL11AQ9H165 835 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 TCERG1O14776 1098 aaKnown RBP8.86□□□□□ -0.99
CDH12-203ENST00000517378 EXOC6Q8TAG9 804 aa8.86□□□□□ -0.99
CDH12-203ENST00000517378 MAP3K4Q9Y6R4 1608 aa8.86□□□□□ -0.99
CDH12-203ENST00000517378 ANP32AP39687 249 aaKnown RBP8.86□□□□□ -0.99
CDH12-203ENST00000517378 MS4A1P11836 297 aa8.86□□□□□ -0.99
CDH12-203ENST00000517378 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
CDH12-203ENST00000517378 CC2D1BQ5T0F9 858 aaKnown RBP8.85□□□□□ -0.99
CDH12-203ENST00000517378 EIF3AQ14152 1382 aaKnown RBP8.84□□□□□ -0.99
CDH12-203ENST00000517378 ZNF521Q96K83 1311 aa8.84□□□□□ -0.99
CDH12-203ENST00000517378 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
CDH12-203ENST00000517378 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
CDH12-203ENST00000517378 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
CDH12-203ENST00000517378 CDCA7LQ96GN5 454 aa8.84□□□□□ -0.99
CDH12-203ENST00000517378 NRXN1Q9ULB1 1477 aa8.84□□□□□ -0.99
CDH12-203ENST00000517378 KIF1BO60333 1816 aa8.84□□□□□ -1
CDH12-203ENST00000517378 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
CDH12-203ENST00000517378 EFCAB6Q5THR3 1501 aa8.83□□□□□ -1
CDH12-203ENST00000517378 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
CDH12-203ENST00000517378 LMTK2Q8IWU2 1503 aa8.83□□□□□ -1
CDH12-203ENST00000517378 PPP2R1AP30153 589 aa8.82□□□□□ -1
CDH12-203ENST00000517378 SETBP1Q9Y6X0 1596 aa8.82□□□□□ -1
CDH12-203ENST00000517378 MROH2AA6NES4 1674 aa8.82□□□□□ -1
CDH12-203ENST00000517378 ZC3H13Q5T200 1668 aaKnown RBP8.82□□□□□ -1
CDH12-203ENST00000517378 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
CDH12-203ENST00000517378 FANCAO15360 1455 aa8.82□□□□□ -1
CDH12-203ENST00000517378 PPRC1Q5VV67 1664 aaKnown RBP8.81□□□□□ -1
CDH12-203ENST00000517378 BACH2Q9BYV9 841 aa8.81□□□□□ -1
CDH12-203ENST00000517378 SBNO2Q9Y2G9 1366 aa8.81□□□□□ -1
CDH12-203ENST00000517378 ERVK-7P63135 1459 aa8.81□□□□□ -1
CDH12-203ENST00000517378 KNSTRNQ9Y448 316 aa8.81□□□□□ -1
CDH12-203ENST00000517378 KANK1Q14678 1352 aa8.81□□□□□ -1
CDH12-203ENST00000517378 ADGRB3O60242 1522 aa8.8□□□□□ -1
CDH12-203ENST00000517378 KIDINS220Q9ULH0 1771 aa8.8□□□□□ -1
CDH12-203ENST00000517378 SLC24A1O60721 1099 aa8.8□□□□□ -1
CDH12-203ENST00000517378 ADAMTS8Q9UP79 889 aa8.8□□□□□ -1
CDH12-203ENST00000517378 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
CDH12-203ENST00000517378 PDE4AP27815 886 aa8.8□□□□□ -1
CDH12-203ENST00000517378 DUSP27Q5VZP5 1158 aa8.8□□□□□ -1
CDH12-203ENST00000517378 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
CDH12-203ENST00000517378 USP32Q8NFA0 1604 aa8.79□□□□□ -1
CDH12-203ENST00000517378 SALL2Q9Y467 1007 aaPredicted RBP8.79□□□□□ -1
CDH12-203ENST00000517378 ADGRL1O94910 1474 aa8.79□□□□□ -1
CDH12-203ENST00000517378 TRMT2AQ8IZ69 625 aaKnown RBP8.78□□□□□ -1
CDH12-203ENST00000517378 CRBNQ96SW2 442 aa8.78□□□□□ -1
CDH12-203ENST00000517378 PPLO60437 1756 aa8.78□□□□□ -1
CDH12-203ENST00000517378 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
CDH12-203ENST00000517378 AFAP1Q8N556 730 aa8.78□□□□□ -1
CDH12-203ENST00000517378 DEKP35659 375 aaKnown RBP8.77□□□□□ -1
CDH12-203ENST00000517378 WDR43Q15061 677 aaKnown RBP eCLIP8.77□□□□□ -1
CDH12-203ENST00000517378 VIRMAQ69YN4 1812 aaKnown RBP8.77□□□□□ -1.01
CDH12-203ENST00000517378 SHPRHQ149N8 1683 aa8.77□□□□□ -1.01
CDH12-203ENST00000517378 NGEFQ8N5V2 710 aa8.77□□□□□ -1.01
CDH12-203ENST00000517378 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1.01
CDH12-203ENST00000517378 PLIN1O60240 522 aa8.76□□□□□ -1.01
CDH12-203ENST00000517378 NKTRP30414 1462 aaKnown RBP8.76□□□□□ -1.01
CDH12-203ENST00000517378 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
CDH12-203ENST00000517378 QRICH2Q9H0J4 1663 aa8.76□□□□□ -1.01
CDH12-203ENST00000517378 SLFN5Q08AF3 891 aa8.76□□□□□ -1.01
CDH12-203ENST00000517378 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
CDH12-203ENST00000517378 ZNF518AQ6AHZ1 1483 aa8.75□□□□□ -1.01
CDH12-203ENST00000517378 ADGRB1O14514 1584 aa8.75□□□□□ -1.01
CDH12-203ENST00000517378 HECW2Q9P2P5 1572 aa8.75□□□□□ -1.01
CDH12-203ENST00000517378 POLR3AO14802 1390 aaPredicted RBP8.74□□□□□ -1.01
CDH12-203ENST00000517378 C20orf194Q5TEA3 1177 aa8.74□□□□□ -1.01
CDH12-203ENST00000517378 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
CDH12-203ENST00000517378 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.74□□□□□ -1.01
CDH12-203ENST00000517378 IQSEC2Q5JU85 1478 aa8.74□□□□□ -1.01
CDH12-203ENST00000517378 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 NBR1Q14596 966 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 USP35Q9P2H5 1018 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 ASXL2Q76L83 1435 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 ADGRF5Q8IZF2 1346 aa8.73□□□□□ -1.01
CDH12-203ENST00000517378 DDRGK1Q96HY6 314 aa8.72□□□□□ -1.01
CDH12-203ENST00000517378 KIF3BO15066 747 aa8.72□□□□□ -1.01
CDH12-203ENST00000517378 MLH3Q9UHC1 1453 aa8.72□□□□□ -1.01
CDH12-203ENST00000517378 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
CDH12-203ENST00000517378 E9PSI1 815 aa8.71□□□□□ -1.02
CDH12-203ENST00000517378 CFAP70Q5T0N1 1121 aa8.71□□□□□ -1.02
CDH12-203ENST00000517378 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
CDH12-203ENST00000517378 ARHGEF28Q8N1W1 1705 aaKnown RBP8.71□□□□□ -1.02
CDH12-203ENST00000517378 NOS1P29475 1434 aa8.71□□□□□ -1.02
CDH12-203ENST00000517378 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.02
CDH12-203ENST00000517378 CAMSAP1Q5T5Y3 1602 aa8.7□□□□□ -1.02
CDH12-203ENST00000517378 NPATQ14207 1427 aa8.7□□□□□ -1.02
CDH12-203ENST00000517378 GLI2P10070 1586 aa8.7□□□□□ -1.02
CDH12-203ENST00000517378 ABCC3O15438 1527 aa8.69□□□□□ -1.02
CDH12-203ENST00000517378 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
CDH12-203ENST00000517378 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
CDH12-203ENST00000517378 SIGLEC1Q9BZZ2 1709 aa8.69□□□□□ -1.02
CDH12-203ENST00000517378 PPM1GO15355 546 aaPredicted RBP8.69□□□□□ -1.02
CDH12-203ENST00000517378 C8orf34Q49A92 452 aa8.69□□□□□ -1.02
CDH12-203ENST00000517378 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
CDH12-203ENST00000517378 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
CDH12-203ENST00000517378 ADGRB2O60241 1585 aa8.68□□□□□ -1.02
CDH12-203ENST00000517378 APAF1O14727 1248 aa8.68□□□□□ -1.02
CDH12-203ENST00000517378 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms