RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 BCL2L12Q9HB09 334 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 HPS5Q9UPZ3 1129 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 JAG2Q9Y219 1238 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PHF20L1A8MW92 1017 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PSEN1P49768 467 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 KRT76Q01546 638 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 COL9A3Q14050 684 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 FBLN7Q53RD9 439 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CYP4X1Q8N118 509 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 WHAMMQ8TF30 809 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CNTNAP3BQ96NU0 1288 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CNTNAP3Q9BZ76 1288 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 RABGEF1Q9UJ41 708 aa0.99□□□□□ -2.25
RNU6-1238P-201ENST00000517215 KIF3CO14782 793 aa0.98□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PTPREP23469 700 aa0.98□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CABP2Q9NPB3 220 aa0.98□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CDKN2AIPQ9NXV6 580 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1238P-201ENST00000517215 CNTNAP5Q8WYK1 1306 aa0.97□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PPP4CP60510 307 aa0.97□□□□□ -2.25
RNU6-1238P-201ENST00000517215 KRTAP5-4Q6L8H1 288 aa0.97□□□□□ -2.25
RNU6-1238P-201ENST00000517215 ANKLE1Q8NAG6 615 aa0.97□□□□□ -2.25
RNU6-1238P-201ENST00000517215 RNF114Q9Y508 228 aa0.97□□□□□ -2.25
RNU6-1238P-201ENST00000517215 NCANO14594 1321 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KRBA1A5PL33 1030 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PRRG2O14669 202 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 HYAL3O43820 417 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KRTAP5-11Q6L8G4 156 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 MIER1Q8N108 512 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 LRCH3Q96II8 777 aa0.96□□□□□ -2.26
RNU6-1238P-201ENST00000517215 SMPD1P17405 629 aa0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PDAP1Q13442 181 aaKnown RBP0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 LRP8Q14114 963 aa0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KRTAP5-1Q6L8H4 278 aa0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 BEND7Q8N7W2 519 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PTCD2Q8WV60 388 aaKnown RBP0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 CSRNP1Q96S65 589 aa0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ZBTB47Q9UFB7 747 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1238P-201ENST00000517215 TTC24A2A3L6 582 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1238P-201ENST00000517215 C2orf72A6NCS6 295 aa0.94□□□□□ -2.26
RNU6-1238P-201ENST00000517215 SPDYE4A6NLX3 237 aa0.94□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PPEF1O14829 653 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PPP1R3GB7ZBB8 358 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 B8ZZF3 427 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KCNA4P22459 653 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 BUD31P41223 144 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 DOC2BQ14184 412 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 FAM98CQ17RN3 349 aaKnown RBP0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PROX2Q3B8N5 592 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 GPR161Q8N6U8 529 aaKnown RBP0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ZNF454Q8N9F8 522 aa0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 COL25A1Q9BXS0 654 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 CIZ1Q9ULV3 898 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ZNF865P0CJ78 1059 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 TRIM46Q7Z4K8 759 aa0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PODNQ7Z5L7 613 aa0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ALYREFQ86V81 257 aaKnown RBP0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 HPS1Q92902 700 aa0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 SEPT9Q9UHD8 586 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1238P-201ENST00000517215 C1QTNF9BB2RNN3 333 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PPFIA3O75145 1194 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ZPR1O75312 459 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 BMP1P13497 986 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 TAL1P17542 331 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 FOSBP53539 338 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 COPS2P61201 443 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 MAP3K10Q02779 954 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 PLA2G2CQ5R387 149 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 LYPD4Q6UWN0 246 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 SPOCD1Q6ZMY3 1216 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 MS4A4AQ96JQ5 239 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ENAMQ9NRM1 1142 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 KIAA1468Q9P260 1216 aa0.91□□□□□ -2.26
RNU6-1238P-201ENST00000517215 ONECUT3O60422 494 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 IGHA2P01877 340 aa0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 IRAK1P51617 712 aa0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 RNFT1Q5M7Z0 435 aa0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 EFCAB3Q8N7B9 438 aa0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 SNIP1Q8TAD8 396 aaKnown RBP0.9□□□□□ -2.27
RNU6-1238P-201ENST00000517215 SOBPA7XYQ1 873 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 J3QL48 77 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 TBC1D12O60347 775 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 S1PR4O95977 384 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 C8AP07357 584 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CELA2BP08218 269 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CHRM1P11229 460 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 RPIAP49247 311 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 APLP1P51693 650 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 RSPO4Q2I0M5 234 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 LILRA6Q6PI73 481 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ZFP42Q96MM3 310 aa0.89□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CD2BP2O95400 341 aaKnown RBP0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 PRSS36Q5K4E3 855 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 NKAPLQ5M9Q1 402 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 KRTAP5-2Q701N4 177 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CD163Q86VB7 1156 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 PLCD3Q8N3E9 789 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 JPH4Q96JJ6 628 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ADAM33Q9BZ11 813 aa0.88□□□□□ -2.27
RNU6-1238P-201ENST00000517215 SOX12O15370 315 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 1097.6 ms