RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 POTEDQ86YR6 584 aa4.3□□□□□ -1.72
RNU6-1238P-201ENST00000517215 AEBP2Q6ZN18 517 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1238P-201ENST00000517215 CHIC1Q5VXU3 224 aa3.56□□□□□ -1.84
RNU6-1238P-201ENST00000517215 SENP3Q9H4L4 574 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1238P-201ENST00000517215 MSH5O43196 834 aa3.26□□□□□ -1.89
RNU6-1238P-201ENST00000517215 POTEHQ6S545 545 aa3.25□□□□□ -1.89
RNU6-1238P-201ENST00000517215 PHF23Q9BUL5 403 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1238P-201ENST00000517215 CACNB1Q02641 598 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1238P-201ENST00000517215 FOXD1Q16676 465 aa3.22□□□□□ -1.89
RNU6-1238P-201ENST00000517215 PLSCR2Q9NRY7 297 aa2.97□□□□□ -1.93
RNU6-1238P-201ENST00000517215 PIAS4Q8N2W9 510 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1238P-201ENST00000517215 SP7Q8TDD2 431 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1238P-201ENST00000517215 RNF39Q9H2S5 420 aa2.73□□□□□ -1.97
RNU6-1238P-201ENST00000517215 C1QBPQ07021 282 aaKnown RBP2.65□□□□□ -1.99
RNU6-1238P-201ENST00000517215 LHX8Q68G74 356 aa2.56□□□□□ -2
RNU6-1238P-201ENST00000517215 DMRT2Q9Y5R5 561 aa2.56□□□□□ -2
RNU6-1238P-201ENST00000517215 PPP6R1Q9UPN7 881 aa2.53□□□□□ -2
RNU6-1238P-201ENST00000517215 DCAF8L1A6NGE4 600 aa2.51□□□□□ -2.01
RNU6-1238P-201ENST00000517215 ADRA2BP18089 450 aa2.48□□□□□ -2.01
RNU6-1238P-201ENST00000517215 MAPK8IP2Q13387 824 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1238P-201ENST00000517215 CHRDL2Q6WN34 429 aa2.46□□□□□ -2.02
RNU6-1238P-201ENST00000517215 POTEMA6NI47 508 aa2.45□□□□□ -2.02
RNU6-1238P-201ENST00000517215 PCDH10Q9P2E7 1040 aa2.43□□□□□ -2.02
RNU6-1238P-201ENST00000517215 POTEGQ6S5H5 508 aa2.42□□□□□ -2.02
RNU6-1238P-201ENST00000517215 HAX1O00165 279 aa2.4□□□□□ -2.03
RNU6-1238P-201ENST00000517215 DSG3P32926 999 aa2.34□□□□□ -2.03
RNU6-1238P-201ENST00000517215 EVX2Q03828 476 aa2.33□□□□□ -2.04
RNU6-1238P-201ENST00000517215 DNAJC5BQ9UF47 199 aa2.27□□□□□ -2.05
RNU6-1238P-201ENST00000517215 SCAF1Q9H7N4 1312 aaKnown RBP2.26□□□□□ -2.05
RNU6-1238P-201ENST00000517215 PIP4P2Q8N4L2 257 aa2.26□□□□□ -2.05
RNU6-1238P-201ENST00000517215 GABBR2O75899 941 aa2.24□□□□□ -2.05
RNU6-1238P-201ENST00000517215 RBM42Q9BTD8 480 aaKnown RBP2.24□□□□□ -2.05
RNU6-1238P-201ENST00000517215 HOXD11P31277 338 aaPredicted RBP2.23□□□□□ -2.05
RNU6-1238P-201ENST00000517215 OTUD5Q96G74 571 aa2.22□□□□□ -2.05
RNU6-1238P-201ENST00000517215 CAPN15O75808 1086 aa2.2□□□□□ -2.06
RNU6-1238P-201ENST00000517215 POTEIP0CG38 1075 aa2.18□□□□□ -2.06
RNU6-1238P-201ENST00000517215 MMRN1Q13201 1228 aa2.18□□□□□ -2.06
RNU6-1238P-201ENST00000517215 CDAN1Q8IWY9 1227 aa2.17□□□□□ -2.06
RNU6-1238P-201ENST00000517215 SPINK5Q9NQ38 1064 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1238P-201ENST00000517215 LCE2DQ5TA82 110 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1238P-201ENST00000517215 FXR2P51116 673 aaKnown RBP eCLIP2.13□□□□□ -2.07
RNU6-1238P-201ENST00000517215 SPNS2Q8IVW8 549 aa2.12□□□□□ -2.07
RNU6-1238P-201ENST00000517215 FAM163AQ96GL9 167 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1238P-201ENST00000517215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.12□□□□□ -2.07
RNU6-1238P-201ENST00000517215 C19orf67A6NJJ6 358 aa2.1□□□□□ -2.07
RNU6-1238P-201ENST00000517215 PLPPR3Q6T4P5 718 aa2.1□□□□□ -2.07
RNU6-1238P-201ENST00000517215 POTEB2H3BUK9 544 aa2.09□□□□□ -2.07
RNU6-1238P-201ENST00000517215 ABCB7O75027 752 aa2.09□□□□□ -2.07
RNU6-1238P-201ENST00000517215 AKT1S1Q96B36 256 aa2.05□□□□□ -2.08
RNU6-1238P-201ENST00000517215 REM2Q8IYK8 340 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1238P-201ENST00000517215 LOC100996750A0A140TA64 210 aa2.03□□□□□ -2.08
RNU6-1238P-201ENST00000517215 DCBLD2Q96PD2 775 aa2.03□□□□□ -2.08
RNU6-1238P-201ENST00000517215 KRTAP4-6Q9BYQ5 205 aa2.03□□□□□ -2.08
RNU6-1238P-201ENST00000517215 RNF216Q9NWF9 866 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1238P-201ENST00000517215 PITPNM1O00562 1244 aa2.02□□□□□ -2.09
RNU6-1238P-201ENST00000517215 TRHP20396 242 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1238P-201ENST00000517215 U3KPZ7 1027 aaPredicted RBP2□□□□□ -2.09
RNU6-1238P-201ENST00000517215 PRKAR2AP13861 404 aaKnown RBP1.97□□□□□ -2.09
RNU6-1238P-201ENST00000517215 ZNF219Q9P2Y4 722 aaPredicted RBP1.97□□□□□ -2.09
RNU6-1238P-201ENST00000517215 CLCN6P51797 869 aa1.96□□□□□ -2.1
RNU6-1238P-201ENST00000517215 MAMSTRQ6ZN01 415 aa1.96□□□□□ -2.1
RNU6-1238P-201ENST00000517215 POTEJP0CG39 1038 aa1.95□□□□□ -2.1
RNU6-1238P-201ENST00000517215 SCUBE2Q9NQ36 999 aa1.91□□□□□ -2.1
RNU6-1238P-201ENST00000517215 ST18O60284 1047 aa1.89□□□□□ -2.11
RNU6-1238P-201ENST00000517215 CNKSR2Q8WXI2 1034 aa1.88□□□□□ -2.11
RNU6-1238P-201ENST00000517215 APLP2Q06481 763 aa1.87□□□□□ -2.11
RNU6-1238P-201ENST00000517215 CD44P16070 742 aaKnown RBP1.86□□□□□ -2.11
RNU6-1238P-201ENST00000517215 PELP1Q8IZL8 1130 aaKnown RBP1.86□□□□□ -2.11
RNU6-1238P-201ENST00000517215 METRNQ9UJH8 293 aa1.85□□□□□ -2.11
RNU6-1238P-201ENST00000517215 RNF166Q96A37 237 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1238P-201ENST00000517215 KRTAP3-3Q9BYR6 98 aa1.84□□□□□ -2.11
RNU6-1238P-201ENST00000517215 KRTAP3-2Q9BYR7 98 aa1.84□□□□□ -2.11
RNU6-1238P-201ENST00000517215 GALR2O43603 387 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1238P-201ENST00000517215 C7P10643 843 aa1.82□□□□□ -2.12
RNU6-1238P-201ENST00000517215 POLA2Q14181 598 aa1.81□□□□□ -2.12
RNU6-1238P-201ENST00000517215 CHADLQ6NUI6 762 aa1.81□□□□□ -2.12
RNU6-1238P-201ENST00000517215 TMEM121BQ9BXQ6 578 aaPredicted RBP1.81□□□□□ -2.12
RNU6-1238P-201ENST00000517215 SLC39A7Q92504 469 aa1.8□□□□□ -2.12
RNU6-1238P-201ENST00000517215 ZNF579Q8NAF0 562 aaKnown RBP1.79□□□□□ -2.12
RNU6-1238P-201ENST00000517215 MARVELD3Q96A59 401 aa1.79□□□□□ -2.12
RNU6-1238P-201ENST00000517215 IRX2Q9BZI1 471 aaPredicted RBP1.79□□□□□ -2.12
RNU6-1238P-201ENST00000517215 CLEC11AQ9Y240 323 aa1.78□□□□□ -2.12
RNU6-1238P-201ENST00000517215 PPP4R3CPQ6ZMV5 832 aa1.77□□□□□ -2.13
RNU6-1238P-201ENST00000517215 PLA2G2EQ9NZK7 142 aa1.77□□□□□ -2.13
RNU6-1238P-201ENST00000517215 OSCARQ8IYS5 282 aa1.76□□□□□ -2.13
RNU6-1238P-201ENST00000517215 MYT1LQ9UL68 1186 aa1.76□□□□□ -2.13
RNU6-1238P-201ENST00000517215 SUZ12Q15022 739 aaKnown RBP1.75□□□□□ -2.13
RNU6-1238P-201ENST00000517215 POTEB3A0JP26 581 aa1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 ASTLQ6HA08 431 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 POTEBQ6S5H4 581 aa1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 KRTAP1-3Q8IUG1 177 aa1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 ZRANB1Q9UGI0 708 aa1.74□□□□□ -2.13
RNU6-1238P-201ENST00000517215 SLAIN1Q8ND83 568 aa1.73□□□□□ -2.13
RNU6-1238P-201ENST00000517215 SPDYE1Q8NFV5 336 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1238P-201ENST00000517215 HS3ST6Q96QI5 342 aa1.73□□□□□ -2.13
RNU6-1238P-201ENST00000517215 KRTAP4-8Q9BYQ9 185 aa1.73□□□□□ -2.13
RNU6-1238P-201ENST00000517215 KRTAP9-6A0A140TA67 174 aa1.72□□□□□ -2.13
RNU6-1238P-201ENST00000517215 POTEFA5A3E0 1075 aa1.72□□□□□ -2.13
RNU6-1238P-201ENST00000517215 ATMINO43313 823 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms