RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 NPHP4O75161 1426 aaPredicted RBP21.48■■□□□ 1.03
SCARNA21-201ENST00000517026 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
SCARNA21-201ENST00000517026 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
SCARNA21-201ENST00000517026 RIMS2Q9UQ26 1411 aa21.47■■□□□ 1.03
SCARNA21-201ENST00000517026 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
SCARNA21-201ENST00000517026 NEURL4Q96JN8 1562 aa21.47■■□□□ 1.03
SCARNA21-201ENST00000517026 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
SCARNA21-201ENST00000517026 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
SCARNA21-201ENST00000517026 CCDC144AA2RUR9 1427 aa21.45■■□□□ 1.02
SCARNA21-201ENST00000517026 ZFYVE9O95405 1425 aa21.45■■□□□ 1.02
SCARNA21-201ENST00000517026 MED14O60244 1454 aa21.45■■□□□ 1.02
SCARNA21-201ENST00000517026 PPP1R15AO75807 674 aaPredicted RBP21.44■■□□□ 1.02
SCARNA21-201ENST00000517026 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
SCARNA21-201ENST00000517026 HDGFP51858 240 aaKnown RBP21.43■■□□□ 1.02
SCARNA21-201ENST00000517026 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
SCARNA21-201ENST00000517026 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
SCARNA21-201ENST00000517026 BCANQ96GW7 911 aa21.41■■□□□ 1.02
SCARNA21-201ENST00000517026 MYO5BQ9ULV0 1848 aa21.39■■□□□ 1.02
SCARNA21-201ENST00000517026 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
SCARNA21-201ENST00000517026 HSPA1LP34931 641 aa21.39■■□□□ 1.01
SCARNA21-201ENST00000517026 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.01
SCARNA21-201ENST00000517026 CPS1P31327 1500 aa21.38■■□□□ 1.01
SCARNA21-201ENST00000517026 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
SCARNA21-201ENST00000517026 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
SCARNA21-201ENST00000517026 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
SCARNA21-201ENST00000517026 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
SCARNA21-201ENST00000517026 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
SCARNA21-201ENST00000517026 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1.01
SCARNA21-201ENST00000517026 DHX57Q6P158 1386 aaKnown RBP21.33■■□□□ 1
SCARNA21-201ENST00000517026 NEXMIFQ5QGS0 1516 aa21.31■■□□□ 1
SCARNA21-201ENST00000517026 KIF1BO60333 1816 aa21.31■■□□□ 1
SCARNA21-201ENST00000517026 VGFO15240 615 aaPredicted RBP21.3■■□□□ 1
SCARNA21-201ENST00000517026 TOM1O60784 492 aa21.29■■□□□ 1
SCARNA21-201ENST00000517026 TBX22Q9Y458 520 aa21.29■■□□□ 1
SCARNA21-201ENST00000517026 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
SCARNA21-201ENST00000517026 PIP4K2BP78356 416 aa21.28■■□□□ 1
SCARNA21-201ENST00000517026 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
SCARNA21-201ENST00000517026 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
SCARNA21-201ENST00000517026 STRCP1A6NGW2 1772 aa21.25■□□□□ 0.99
SCARNA21-201ENST00000517026 KCNA6P17658 529 aa21.24■□□□□ 0.99
SCARNA21-201ENST00000517026 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
SCARNA21-201ENST00000517026 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
SCARNA21-201ENST00000517026 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
SCARNA21-201ENST00000517026 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
SCARNA21-201ENST00000517026 METP08581 1390 aa21.2■□□□□ 0.98
SCARNA21-201ENST00000517026 LRRC7Q96NW7 1537 aa21.19■□□□□ 0.98
SCARNA21-201ENST00000517026 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
SCARNA21-201ENST00000517026 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
SCARNA21-201ENST00000517026 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
SCARNA21-201ENST00000517026 PPLO60437 1756 aa21.18■□□□□ 0.98
SCARNA21-201ENST00000517026 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
SCARNA21-201ENST00000517026 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
SCARNA21-201ENST00000517026 PROSER2Q86WR7 435 aaPredicted RBP21.16■□□□□ 0.98
SCARNA21-201ENST00000517026 PIK3R4Q99570 1358 aa21.15■□□□□ 0.98
SCARNA21-201ENST00000517026 DIP2AQ14689 1571 aa21.14■□□□□ 0.98
SCARNA21-201ENST00000517026 CFAP70Q5T0N1 1121 aa21.13■□□□□ 0.97
SCARNA21-201ENST00000517026 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
SCARNA21-201ENST00000517026 MYOM2P54296 1465 aa21.13■□□□□ 0.97
SCARNA21-201ENST00000517026 PIK3C2GO75747 1445 aa21.12■□□□□ 0.97
SCARNA21-201ENST00000517026 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
SCARNA21-201ENST00000517026 C14orf93Q9H972 538 aaKnown RBP21.12■□□□□ 0.97
SCARNA21-201ENST00000517026 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
SCARNA21-201ENST00000517026 TMEM94Q12767 1356 aa21.11■□□□□ 0.97
SCARNA21-201ENST00000517026 IFT172Q9UG01 1749 aa21.11■□□□□ 0.97
SCARNA21-201ENST00000517026 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
SCARNA21-201ENST00000517026 STAC3Q96MF2 364 aa21.09■□□□□ 0.97
SCARNA21-201ENST00000517026 STK26Q9P289 416 aa21.08■□□□□ 0.97
SCARNA21-201ENST00000517026 RGS17Q9UGC6 210 aaPredicted RBP21.08■□□□□ 0.97
SCARNA21-201ENST00000517026 XIRP1Q702N8 1843 aaKnown RBP21.08■□□□□ 0.96
SCARNA21-201ENST00000517026 NKTRP30414 1462 aaKnown RBP21.07■□□□□ 0.96
SCARNA21-201ENST00000517026 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
SCARNA21-201ENST00000517026 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
SCARNA21-201ENST00000517026 SETD1AO15047 1707 aaKnown RBP21.04■□□□□ 0.96
SCARNA21-201ENST00000517026 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
SCARNA21-201ENST00000517026 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
SCARNA21-201ENST00000517026 ASXL1Q8IXJ9 1541 aa21.03■□□□□ 0.96
SCARNA21-201ENST00000517026 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
SCARNA21-201ENST00000517026 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
SCARNA21-201ENST00000517026 XRN1Q8IZH2 1706 aaKnown RBP21■□□□□ 0.95
SCARNA21-201ENST00000517026 TONSLQ96HA7 1378 aa20.99■□□□□ 0.95
SCARNA21-201ENST00000517026 PRAG1Q86YV5 1406 aa20.99■□□□□ 0.95
SCARNA21-201ENST00000517026 YTHDC2Q9H6S0 1430 aaKnown RBP20.99■□□□□ 0.95
SCARNA21-201ENST00000517026 ABCC11Q96J66 1382 aa20.98■□□□□ 0.95
SCARNA21-201ENST00000517026 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
SCARNA21-201ENST00000517026 MSH6P52701 1360 aa20.97■□□□□ 0.95
SCARNA21-201ENST00000517026 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
SCARNA21-201ENST00000517026 PTCH1Q13635 1447 aa20.96■□□□□ 0.95
SCARNA21-201ENST00000517026 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
SCARNA21-201ENST00000517026 NCOA3Q9Y6Q9 1424 aa20.96■□□□□ 0.95
SCARNA21-201ENST00000517026 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
SCARNA21-201ENST00000517026 C19orf44Q9H6X5 657 aa20.96■□□□□ 0.95
SCARNA21-201ENST00000517026 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
SCARNA21-201ENST00000517026 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
SCARNA21-201ENST00000517026 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
SCARNA21-201ENST00000517026 ADGRB1O14514 1584 aa20.94■□□□□ 0.94
SCARNA21-201ENST00000517026 TECPR2O15040 1411 aa20.94■□□□□ 0.94
SCARNA21-201ENST00000517026 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
SCARNA21-201ENST00000517026 LAMC1P11047 1609 aa20.91■□□□□ 0.94
SCARNA21-201ENST00000517026 ATF3P18847 181 aa20.91■□□□□ 0.94
SCARNA21-201ENST00000517026 SAFB2Q14151 953 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms