RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
RN7SKP260-201ENST00000516907 PLEKHG1Q9ULL1 1385 aa7.47□□□□□ -1.21
RN7SKP260-201ENST00000516907 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
RN7SKP260-201ENST00000516907 IQGAP1P46940 1657 aa7.47□□□□□ -1.21
RN7SKP260-201ENST00000516907 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
RN7SKP260-201ENST00000516907 STAC3Q96MF2 364 aa7.46□□□□□ -1.22
RN7SKP260-201ENST00000516907 STRCQ7RTU9 1775 aa7.46□□□□□ -1.22
RN7SKP260-201ENST00000516907 DIP2AQ14689 1571 aa7.46□□□□□ -1.22
RN7SKP260-201ENST00000516907 PIK3R4Q99570 1358 aa7.46□□□□□ -1.22
RN7SKP260-201ENST00000516907 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.22
RN7SKP260-201ENST00000516907 TOM1O60784 492 aa7.45□□□□□ -1.22
RN7SKP260-201ENST00000516907 ZNF335Q9H4Z2 1342 aaPredicted RBP7.45□□□□□ -1.22
RN7SKP260-201ENST00000516907 NEURL4Q96JN8 1562 aa7.45□□□□□ -1.22
RN7SKP260-201ENST00000516907 ZFYVE9O95405 1425 aa7.44□□□□□ -1.22
RN7SKP260-201ENST00000516907 KCNA6P17658 529 aa7.44□□□□□ -1.22
RN7SKP260-201ENST00000516907 LTKP29376 864 aa7.44□□□□□ -1.22
RN7SKP260-201ENST00000516907 TBX22Q9Y458 520 aa7.44□□□□□ -1.22
RN7SKP260-201ENST00000516907 TMEM131LA2VDJ0 1609 aa7.44□□□□□ -1.22
RN7SKP260-201ENST00000516907 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
RN7SKP260-201ENST00000516907 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
RN7SKP260-201ENST00000516907 UBAP1LF5GYI3 381 aa7.42□□□□□ -1.22
RN7SKP260-201ENST00000516907 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
RN7SKP260-201ENST00000516907 SLC26A8Q96RN1 970 aa7.42□□□□□ -1.22
RN7SKP260-201ENST00000516907 MSH6P52701 1360 aa7.42□□□□□ -1.22
RN7SKP260-201ENST00000516907 NCOA3Q9Y6Q9 1424 aa7.42□□□□□ -1.22
RN7SKP260-201ENST00000516907 SCAF1Q9H7N4 1312 aaKnown RBP7.41□□□□□ -1.22
RN7SKP260-201ENST00000516907 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
RN7SKP260-201ENST00000516907 LTBP4Q8N2S1 1624 aa7.41□□□□□ -1.22
RN7SKP260-201ENST00000516907 KIF1BO60333 1816 aa7.41□□□□□ -1.22
RN7SKP260-201ENST00000516907 FOXD1Q16676 465 aa7.4□□□□□ -1.22
RN7SKP260-201ENST00000516907 RGL3Q3MIN7 710 aa7.4□□□□□ -1.22
RN7SKP260-201ENST00000516907 SETBP1Q9Y6X0 1596 aa7.4□□□□□ -1.22
RN7SKP260-201ENST00000516907 CFAP65Q6ZU64 1925 aaKnown RBP7.4□□□□□ -1.23
RN7SKP260-201ENST00000516907 ATF3P18847 181 aa7.39□□□□□ -1.23
RN7SKP260-201ENST00000516907 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP260-201ENST00000516907 NEXMIFQ5QGS0 1516 aa7.38□□□□□ -1.23
RN7SKP260-201ENST00000516907 TMEM94Q12767 1356 aa7.38□□□□□ -1.23
RN7SKP260-201ENST00000516907 ILDR1Q86SU0 546 aaPredicted RBP7.38□□□□□ -1.23
RN7SKP260-201ENST00000516907 CADPS2Q86UW7 1296 aa7.38□□□□□ -1.23
RN7SKP260-201ENST00000516907 NWD1Q149M9 1564 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 LRRC7Q96NW7 1537 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 MYOM2P54296 1465 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 SPATA31E1Q6ZUB1 1445 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 C19orf44Q9H6X5 657 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 AMOTL2Q9Y2J4 779 aa7.37□□□□□ -1.23
RN7SKP260-201ENST00000516907 ADAMTS13Q76LX8 1427 aa7.36□□□□□ -1.23
RN7SKP260-201ENST00000516907 DHX57Q6P158 1386 aaKnown RBP7.36□□□□□ -1.23
RN7SKP260-201ENST00000516907 PIP4K2BP78356 416 aa7.36□□□□□ -1.23
RN7SKP260-201ENST00000516907 DCCP43146 1447 aa7.35□□□□□ -1.23
RN7SKP260-201ENST00000516907 PTCH1Q13635 1447 aa7.35□□□□□ -1.23
RN7SKP260-201ENST00000516907 DCAF11Q8TEB1 546 aa7.35□□□□□ -1.23
RN7SKP260-201ENST00000516907 SENP3Q9H4L4 574 aaPredicted RBP7.35□□□□□ -1.23
RN7SKP260-201ENST00000516907 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
RN7SKP260-201ENST00000516907 LAMC1P11047 1609 aa7.34□□□□□ -1.23
RN7SKP260-201ENST00000516907 EIF3AQ14152 1382 aaKnown RBP7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 TONSLQ96HA7 1378 aa7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 CLSPNQ9HAW4 1339 aa7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 ALKQ9UM73 1620 aa7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 PRAG1Q86YV5 1406 aa7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 METP08581 1390 aa7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 LRPPRCP42704 1394 aaKnown RBP7.33□□□□□ -1.24
RN7SKP260-201ENST00000516907 ADGRF5Q8IZF2 1346 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 POGKQ9P215 609 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 SLAIN2Q9P270 581 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 KDM2AQ9Y2K7 1162 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 PPLO60437 1756 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 FAM135BQ49AJ0 1406 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 ADGRL3Q9HAR2 1447 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 ABCC11Q96J66 1382 aa7.32□□□□□ -1.24
RN7SKP260-201ENST00000516907 MYO5BQ9ULV0 1848 aa7.31□□□□□ -1.24
RN7SKP260-201ENST00000516907 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
RN7SKP260-201ENST00000516907 TECPR2O15040 1411 aa7.31□□□□□ -1.24
RN7SKP260-201ENST00000516907 SIRT1Q96EB6 747 aa7.31□□□□□ -1.24
RN7SKP260-201ENST00000516907 YTHDC2Q9H6S0 1430 aaKnown RBP7.3□□□□□ -1.24
RN7SKP260-201ENST00000516907 NEUROD1Q13562 356 aa7.3□□□□□ -1.24
RN7SKP260-201ENST00000516907 STK26Q9P289 416 aa7.3□□□□□ -1.24
RN7SKP260-201ENST00000516907 NRXN3Q9Y4C0 1643 aa7.3□□□□□ -1.24
RN7SKP260-201ENST00000516907 XRN1Q8IZH2 1706 aaKnown RBP7.3□□□□□ -1.24
RN7SKP260-201ENST00000516907 CHD2O14647 1828 aaKnown RBP7.29□□□□□ -1.24
RN7SKP260-201ENST00000516907 PCGF6Q9BYE7 350 aa7.29□□□□□ -1.24
RN7SKP260-201ENST00000516907 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
RN7SKP260-201ENST00000516907 PTPRUQ92729 1446 aa7.28□□□□□ -1.24
RN7SKP260-201ENST00000516907 IFT172Q9UG01 1749 aa7.28□□□□□ -1.24
RN7SKP260-201ENST00000516907 CFAP70Q5T0N1 1121 aa7.28□□□□□ -1.24
RN7SKP260-201ENST00000516907 DLC1Q96QB1 1528 aa7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 TMEM132EQ6IEE7 984 aa7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 ROCK2O75116 1388 aaKnown RBP7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 ROBO2Q9HCK4 1378 aa7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 NPHP3Q7Z494 1330 aa7.27□□□□□ -1.25
RN7SKP260-201ENST00000516907 CDC42BPGQ6DT37 1551 aa7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 HSPA1LP34931 641 aa7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 L3MBTL2Q969R5 705 aa7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 RBM33Q96EV2 1170 aaKnown RBP7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 PRAM1Q96QH2 718 aa7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 TRAK1Q9UPV9 953 aa7.26□□□□□ -1.25
RN7SKP260-201ENST00000516907 STRCP1A6NGW2 1772 aa7.25□□□□□ -1.25
RN7SKP260-201ENST00000516907 JCADQ9P266 1359 aa7.25□□□□□ -1.25
RN7SKP260-201ENST00000516907 KNDC1Q76NI1 1749 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms