RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 PPP1R15AO75807 674 aaPredicted RBP14.19□□□□□ -0.14
SCARNA16-201ENST00000515981 BCANQ96GW7 911 aa14.19□□□□□ -0.14
SCARNA16-201ENST00000515981 KIF1BO60333 1816 aa14.19□□□□□ -0.14
SCARNA16-201ENST00000515981 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
SCARNA16-201ENST00000515981 SPATA31E1Q6ZUB1 1445 aa14.18□□□□□ -0.14
SCARNA16-201ENST00000515981 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
SCARNA16-201ENST00000515981 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 NPHP4O75161 1426 aaPredicted RBP14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 HDGFP51858 240 aaKnown RBP14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
SCARNA16-201ENST00000515981 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCARNA16-201ENST00000515981 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
SCARNA16-201ENST00000515981 POLR1AO95602 1720 aaPredicted RBP14.14□□□□□ -0.15
SCARNA16-201ENST00000515981 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
SCARNA16-201ENST00000515981 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
SCARNA16-201ENST00000515981 MED14O60244 1454 aa14.13□□□□□ -0.15
SCARNA16-201ENST00000515981 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
SCARNA16-201ENST00000515981 DCAF11Q8TEB1 546 aa14.12□□□□□ -0.15
SCARNA16-201ENST00000515981 ZNF335Q9H4Z2 1342 aaPredicted RBP14.12□□□□□ -0.15
SCARNA16-201ENST00000515981 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
SCARNA16-201ENST00000515981 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
SCARNA16-201ENST00000515981 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
SCARNA16-201ENST00000515981 IQGAP1P46940 1657 aa14.1□□□□□ -0.15
SCARNA16-201ENST00000515981 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
SCARNA16-201ENST00000515981 ADAMTS13Q76LX8 1427 aa14.08□□□□□ -0.15
SCARNA16-201ENST00000515981 TBX22Q9Y458 520 aa14.08□□□□□ -0.16
SCARNA16-201ENST00000515981 PPLO60437 1756 aa14.08□□□□□ -0.16
SCARNA16-201ENST00000515981 CFAP70Q5T0N1 1121 aa14.05□□□□□ -0.16
SCARNA16-201ENST00000515981 METP08581 1390 aa14.05□□□□□ -0.16
SCARNA16-201ENST00000515981 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
SCARNA16-201ENST00000515981 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
SCARNA16-201ENST00000515981 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
SCARNA16-201ENST00000515981 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
SCARNA16-201ENST00000515981 KCNA6P17658 529 aa14.03□□□□□ -0.16
SCARNA16-201ENST00000515981 SETBP1Q9Y6X0 1596 aa14.02□□□□□ -0.16
SCARNA16-201ENST00000515981 PTPRUQ92729 1446 aa14.02□□□□□ -0.16
SCARNA16-201ENST00000515981 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
SCARNA16-201ENST00000515981 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
SCARNA16-201ENST00000515981 STRCP1A6NGW2 1772 aa14.01□□□□□ -0.17
SCARNA16-201ENST00000515981 ALKQ9UM73 1620 aa14.01□□□□□ -0.17
SCARNA16-201ENST00000515981 STK26Q9P289 416 aa14.01□□□□□ -0.17
SCARNA16-201ENST00000515981 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
SCARNA16-201ENST00000515981 MYOM2P54296 1465 aa14□□□□□ -0.17
SCARNA16-201ENST00000515981 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
SCARNA16-201ENST00000515981 PIK3C2GO75747 1445 aa14□□□□□ -0.17
SCARNA16-201ENST00000515981 TONSLQ96HA7 1378 aa14□□□□□ -0.17
SCARNA16-201ENST00000515981 CERKQ8TCT0 537 aa14□□□□□ -0.17
SCARNA16-201ENST00000515981 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
SCARNA16-201ENST00000515981 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
SCARNA16-201ENST00000515981 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
SCARNA16-201ENST00000515981 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
SCARNA16-201ENST00000515981 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
SCARNA16-201ENST00000515981 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
SCARNA16-201ENST00000515981 PRAG1Q86YV5 1406 aa13.96□□□□□ -0.18
SCARNA16-201ENST00000515981 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
SCARNA16-201ENST00000515981 PIK3R4Q99570 1358 aa13.96□□□□□ -0.18
SCARNA16-201ENST00000515981 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
SCARNA16-201ENST00000515981 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
SCARNA16-201ENST00000515981 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
SCARNA16-201ENST00000515981 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
SCARNA16-201ENST00000515981 TMEM94Q12767 1356 aa13.94□□□□□ -0.18
SCARNA16-201ENST00000515981 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
SCARNA16-201ENST00000515981 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
SCARNA16-201ENST00000515981 CPS1P31327 1500 aa13.92□□□□□ -0.18
SCARNA16-201ENST00000515981 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
SCARNA16-201ENST00000515981 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
SCARNA16-201ENST00000515981 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
SCARNA16-201ENST00000515981 C14orf37Q86TY3 774 aa13.91□□□□□ -0.18
SCARNA16-201ENST00000515981 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCARNA16-201ENST00000515981 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
SCARNA16-201ENST00000515981 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
SCARNA16-201ENST00000515981 XRN1Q8IZH2 1706 aaKnown RBP13.9□□□□□ -0.18
SCARNA16-201ENST00000515981 ADGRB1O14514 1584 aa13.89□□□□□ -0.19
SCARNA16-201ENST00000515981 NKTRP30414 1462 aaKnown RBP13.88□□□□□ -0.19
SCARNA16-201ENST00000515981 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
SCARNA16-201ENST00000515981 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
SCARNA16-201ENST00000515981 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
SCARNA16-201ENST00000515981 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
SCARNA16-201ENST00000515981 POGKQ9P215 609 aa13.87□□□□□ -0.19
SCARNA16-201ENST00000515981 LAMC1P11047 1609 aa13.86□□□□□ -0.19
SCARNA16-201ENST00000515981 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
SCARNA16-201ENST00000515981 TECPR2O15040 1411 aa13.85□□□□□ -0.19
SCARNA16-201ENST00000515981 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
SCARNA16-201ENST00000515981 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
SCARNA16-201ENST00000515981 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
SCARNA16-201ENST00000515981 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
SCARNA16-201ENST00000515981 TRPM1Q7Z4N2 1603 aa13.84□□□□□ -0.19
SCARNA16-201ENST00000515981 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
SCARNA16-201ENST00000515981 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
SCARNA16-201ENST00000515981 HIRIP3Q9BW71 556 aaPredicted RBP13.83□□□□□ -0.2
SCARNA16-201ENST00000515981 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
SCARNA16-201ENST00000515981 MSH6P52701 1360 aa13.83□□□□□ -0.2
SCARNA16-201ENST00000515981 ATF3P18847 181 aa13.82□□□□□ -0.2
SCARNA16-201ENST00000515981 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
SCARNA16-201ENST00000515981 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
SCARNA16-201ENST00000515981 TOM1O60784 492 aa13.81□□□□□ -0.2
SCARNA16-201ENST00000515981 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
SCARNA16-201ENST00000515981 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms