RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
SCARNA16-201ENST00000515981 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
SCARNA16-201ENST00000515981 ABCC9O60706 1549 aa20.02■□□□□ 0.8
SCARNA16-201ENST00000515981 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
SCARNA16-201ENST00000515981 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SCARNA16-201ENST00000515981 NACADO15069 1562 aa19.23■□□□□ 0.67
SCARNA16-201ENST00000515981 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
SCARNA16-201ENST00000515981 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
SCARNA16-201ENST00000515981 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
SCARNA16-201ENST00000515981 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
SCARNA16-201ENST00000515981 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
SCARNA16-201ENST00000515981 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
SCARNA16-201ENST00000515981 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
SCARNA16-201ENST00000515981 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
SCARNA16-201ENST00000515981 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
SCARNA16-201ENST00000515981 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
SCARNA16-201ENST00000515981 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.5
SCARNA16-201ENST00000515981 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
SCARNA16-201ENST00000515981 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
SCARNA16-201ENST00000515981 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SCARNA16-201ENST00000515981 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
SCARNA16-201ENST00000515981 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
SCARNA16-201ENST00000515981 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
SCARNA16-201ENST00000515981 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
SCARNA16-201ENST00000515981 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
SCARNA16-201ENST00000515981 WIZO95785 1651 aa17.74■□□□□ 0.43
SCARNA16-201ENST00000515981 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
SCARNA16-201ENST00000515981 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
SCARNA16-201ENST00000515981 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
SCARNA16-201ENST00000515981 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
SCARNA16-201ENST00000515981 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
SCARNA16-201ENST00000515981 NESP48681 1621 aa17.39■□□□□ 0.38
SCARNA16-201ENST00000515981 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
SCARNA16-201ENST00000515981 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
SCARNA16-201ENST00000515981 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
SCARNA16-201ENST00000515981 CFTRP13569 1480 aa17.21■□□□□ 0.35
SCARNA16-201ENST00000515981 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
SCARNA16-201ENST00000515981 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
SCARNA16-201ENST00000515981 KIF21AQ7Z4S6 1674 aa17.11■□□□□ 0.33
SCARNA16-201ENST00000515981 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
SCARNA16-201ENST00000515981 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
SCARNA16-201ENST00000515981 PRDM2Q13029 1718 aa17■□□□□ 0.31
SCARNA16-201ENST00000515981 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
SCARNA16-201ENST00000515981 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
SCARNA16-201ENST00000515981 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
SCARNA16-201ENST00000515981 WDR62O43379 1518 aa16.89■□□□□ 0.29
SCARNA16-201ENST00000515981 CUX2O14529 1486 aa16.88■□□□□ 0.29
SCARNA16-201ENST00000515981 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
SCARNA16-201ENST00000515981 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
SCARNA16-201ENST00000515981 CUX1P39880 1505 aa16.8■□□□□ 0.28
SCARNA16-201ENST00000515981 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
SCARNA16-201ENST00000515981 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
SCARNA16-201ENST00000515981 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
SCARNA16-201ENST00000515981 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
SCARNA16-201ENST00000515981 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
SCARNA16-201ENST00000515981 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
SCARNA16-201ENST00000515981 SOGA1O94964 1423 aa16.69■□□□□ 0.26
SCARNA16-201ENST00000515981 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
SCARNA16-201ENST00000515981 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
SCARNA16-201ENST00000515981 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
SCARNA16-201ENST00000515981 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
SCARNA16-201ENST00000515981 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
SCARNA16-201ENST00000515981 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
SCARNA16-201ENST00000515981 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCARNA16-201ENST00000515981 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SCARNA16-201ENST00000515981 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
SCARNA16-201ENST00000515981 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
SCARNA16-201ENST00000515981 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
SCARNA16-201ENST00000515981 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
SCARNA16-201ENST00000515981 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
SCARNA16-201ENST00000515981 FBLN2P98095 1184 aa16.42■□□□□ 0.22
SCARNA16-201ENST00000515981 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
SCARNA16-201ENST00000515981 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
SCARNA16-201ENST00000515981 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
SCARNA16-201ENST00000515981 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
SCARNA16-201ENST00000515981 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
SCARNA16-201ENST00000515981 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
SCARNA16-201ENST00000515981 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
SCARNA16-201ENST00000515981 IGF1RP08069 1367 aa16.35■□□□□ 0.21
SCARNA16-201ENST00000515981 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
SCARNA16-201ENST00000515981 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
SCARNA16-201ENST00000515981 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
SCARNA16-201ENST00000515981 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
SCARNA16-201ENST00000515981 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
SCARNA16-201ENST00000515981 CHD1O14646 1710 aa16.29■□□□□ 0.2
SCARNA16-201ENST00000515981 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
SCARNA16-201ENST00000515981 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
SCARNA16-201ENST00000515981 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
SCARNA16-201ENST00000515981 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
SCARNA16-201ENST00000515981 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
SCARNA16-201ENST00000515981 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
SCARNA16-201ENST00000515981 CUL7Q14999 1698 aa16.15■□□□□ 0.18
SCARNA16-201ENST00000515981 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
SCARNA16-201ENST00000515981 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SCARNA16-201ENST00000515981 NUP160Q12769 1436 aa16.12■□□□□ 0.17
SCARNA16-201ENST00000515981 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
SCARNA16-201ENST00000515981 EEA1Q15075 1411 aa16.11■□□□□ 0.17
SCARNA16-201ENST00000515981 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
SCARNA16-201ENST00000515981 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
SCARNA16-201ENST00000515981 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms