RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
PDCD6-211ENST00000515587 RGS17Q9UGC6 210 aaPredicted RBP22.1■■□□□ 1.13
PDCD6-211ENST00000515587 ADGRB3O60242 1522 aa22.1■■□□□ 1.13
PDCD6-211ENST00000515587 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.13
PDCD6-211ENST00000515587 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
PDCD6-211ENST00000515587 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
PDCD6-211ENST00000515587 TMEM131LA2VDJ0 1609 aa22.06■■□□□ 1.12
PDCD6-211ENST00000515587 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
PDCD6-211ENST00000515587 DHX57Q6P158 1386 aaKnown RBP22.03■■□□□ 1.12
PDCD6-211ENST00000515587 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
PDCD6-211ENST00000515587 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
PDCD6-211ENST00000515587 SLIT1O75093 1534 aa21.98■■□□□ 1.11
PDCD6-211ENST00000515587 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
PDCD6-211ENST00000515587 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
PDCD6-211ENST00000515587 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
PDCD6-211ENST00000515587 TMEM2Q9UHN6 1383 aa21.98■■□□□ 1.11
PDCD6-211ENST00000515587 HDGFP51858 240 aaKnown RBP21.97■■□□□ 1.11
PDCD6-211ENST00000515587 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
PDCD6-211ENST00000515587 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
PDCD6-211ENST00000515587 POTEAQ6S8J7 498 aa21.93■■□□□ 1.1
PDCD6-211ENST00000515587 TXNDC2Q86VQ3 553 aa21.93■■□□□ 1.1
PDCD6-211ENST00000515587 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDCD6-211ENST00000515587 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
PDCD6-211ENST00000515587 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
PDCD6-211ENST00000515587 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
PDCD6-211ENST00000515587 ZFYVE9O95405 1425 aa21.9■■□□□ 1.1
PDCD6-211ENST00000515587 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
PDCD6-211ENST00000515587 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
PDCD6-211ENST00000515587 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
PDCD6-211ENST00000515587 PPLO60437 1756 aa21.89■■□□□ 1.1
PDCD6-211ENST00000515587 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.09
PDCD6-211ENST00000515587 LTKP29376 864 aa21.88■■□□□ 1.09
PDCD6-211ENST00000515587 NEXMIFQ5QGS0 1516 aa21.88■■□□□ 1.09
PDCD6-211ENST00000515587 IQGAP1P46940 1657 aa21.88■■□□□ 1.09
PDCD6-211ENST00000515587 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
PDCD6-211ENST00000515587 MED14O60244 1454 aa21.86■■□□□ 1.09
PDCD6-211ENST00000515587 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
PDCD6-211ENST00000515587 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
PDCD6-211ENST00000515587 BCANQ96GW7 911 aa21.85■■□□□ 1.09
PDCD6-211ENST00000515587 VGFO15240 615 aaPredicted RBP21.84■■□□□ 1.09
PDCD6-211ENST00000515587 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
PDCD6-211ENST00000515587 CLSPNQ9HAW4 1339 aa21.83■■□□□ 1.09
PDCD6-211ENST00000515587 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
PDCD6-211ENST00000515587 STRCP1A6NGW2 1772 aa21.83■■□□□ 1.09
PDCD6-211ENST00000515587 PLEKHG1Q9ULL1 1385 aa21.83■■□□□ 1.08
PDCD6-211ENST00000515587 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
PDCD6-211ENST00000515587 STAC3Q96MF2 364 aa21.77■■□□□ 1.08
PDCD6-211ENST00000515587 MYOM2P54296 1465 aa21.77■■□□□ 1.07
PDCD6-211ENST00000515587 DIP2AQ14689 1571 aa21.76■■□□□ 1.07
PDCD6-211ENST00000515587 SETBP1Q9Y6X0 1596 aa21.75■■□□□ 1.07
PDCD6-211ENST00000515587 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
PDCD6-211ENST00000515587 KDM2AQ9Y2K7 1162 aa21.74■■□□□ 1.07
PDCD6-211ENST00000515587 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
PDCD6-211ENST00000515587 SLC26A8Q96RN1 970 aa21.73■■□□□ 1.07
PDCD6-211ENST00000515587 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
PDCD6-211ENST00000515587 NRXN3Q9Y4C0 1643 aa21.72■■□□□ 1.07
PDCD6-211ENST00000515587 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
PDCD6-211ENST00000515587 TBX22Q9Y458 520 aa21.7■■□□□ 1.06
PDCD6-211ENST00000515587 ADAMTS13Q76LX8 1427 aa21.7■■□□□ 1.06
PDCD6-211ENST00000515587 LAMC1P11047 1609 aa21.69■■□□□ 1.06
PDCD6-211ENST00000515587 NRXN1Q9ULB1 1477 aa21.69■■□□□ 1.06
PDCD6-211ENST00000515587 PIK3C2GO75747 1445 aa21.68■■□□□ 1.06
PDCD6-211ENST00000515587 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
PDCD6-211ENST00000515587 PIK3R4Q99570 1358 aa21.65■■□□□ 1.06
PDCD6-211ENST00000515587 CHD2O14647 1828 aaKnown RBP21.65■■□□□ 1.06
PDCD6-211ENST00000515587 UPF1Q92900 1129 aaKnown RBP eCLIP21.64■■□□□ 1.05
PDCD6-211ENST00000515587 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
PDCD6-211ENST00000515587 KIAA1210Q9ULL0 1709 aa21.61■■□□□ 1.05
PDCD6-211ENST00000515587 KCNA6P17658 529 aa21.61■■□□□ 1.05
PDCD6-211ENST00000515587 PRAG1Q86YV5 1406 aa21.61■■□□□ 1.05
PDCD6-211ENST00000515587 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
PDCD6-211ENST00000515587 NWD1Q149M9 1564 aa21.6■■□□□ 1.05
PDCD6-211ENST00000515587 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
PDCD6-211ENST00000515587 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
PDCD6-211ENST00000515587 METP08581 1390 aa21.59■■□□□ 1.05
PDCD6-211ENST00000515587 AMOTL2Q9Y2J4 779 aa21.56■■□□□ 1.04
PDCD6-211ENST00000515587 TMEM94Q12767 1356 aa21.56■■□□□ 1.04
PDCD6-211ENST00000515587 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
PDCD6-211ENST00000515587 XRN1Q8IZH2 1706 aaKnown RBP21.55■■□□□ 1.04
PDCD6-211ENST00000515587 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
PDCD6-211ENST00000515587 TRPM1Q7Z4N2 1603 aa21.54■■□□□ 1.04
PDCD6-211ENST00000515587 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
PDCD6-211ENST00000515587 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
PDCD6-211ENST00000515587 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
PDCD6-211ENST00000515587 ASXL1Q8IXJ9 1541 aa21.53■■□□□ 1.04
PDCD6-211ENST00000515587 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.04
PDCD6-211ENST00000515587 KNDC1Q76NI1 1749 aa21.52■■□□□ 1.03
PDCD6-211ENST00000515587 LRPPRCP42704 1394 aaKnown RBP21.51■■□□□ 1.03
PDCD6-211ENST00000515587 STK26Q9P289 416 aa21.51■■□□□ 1.03
PDCD6-211ENST00000515587 YTHDC2Q9H6S0 1430 aaKnown RBP21.51■■□□□ 1.03
PDCD6-211ENST00000515587 ADGRB1O14514 1584 aa21.5■■□□□ 1.03
PDCD6-211ENST00000515587 JCADQ9P266 1359 aa21.48■■□□□ 1.03
PDCD6-211ENST00000515587 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
PDCD6-211ENST00000515587 PTCH1Q13635 1447 aa21.47■■□□□ 1.03
PDCD6-211ENST00000515587 ROCK2O75116 1388 aaKnown RBP21.47■■□□□ 1.03
PDCD6-211ENST00000515587 ABCC11Q96J66 1382 aa21.47■■□□□ 1.03
PDCD6-211ENST00000515587 TECPR2O15040 1411 aa21.46■■□□□ 1.03
PDCD6-211ENST00000515587 RALGAPBQ86X10 1494 aa21.45■■□□□ 1.03
PDCD6-211ENST00000515587 NBPF1Q3BBV0 1214 aa21.45■■□□□ 1.02
PDCD6-211ENST00000515587 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms