RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
SNX2-213ENST00000514949 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
SNX2-213ENST00000514949 MAP3K4Q9Y6R4 1608 aa23.28■■□□□ 1.32
SNX2-213ENST00000514949 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
SNX2-213ENST00000514949 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
SNX2-213ENST00000514949 MYOM1P52179 1685 aa23.28■■□□□ 1.32
SNX2-213ENST00000514949 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
SNX2-213ENST00000514949 KIF3BO15066 747 aa23.27■■□□□ 1.32
SNX2-213ENST00000514949 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
SNX2-213ENST00000514949 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
SNX2-213ENST00000514949 CDCA7LQ96GN5 454 aa23.26■■□□□ 1.31
SNX2-213ENST00000514949 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
SNX2-213ENST00000514949 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
SNX2-213ENST00000514949 NRXN1Q9ULB1 1477 aa23.25■■□□□ 1.31
SNX2-213ENST00000514949 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
SNX2-213ENST00000514949 KIF1BO60333 1816 aa23.24■■□□□ 1.31
SNX2-213ENST00000514949 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
SNX2-213ENST00000514949 KDM5AP29375 1690 aaKnown RBP23.23■■□□□ 1.31
SNX2-213ENST00000514949 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
SNX2-213ENST00000514949 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
SNX2-213ENST00000514949 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
SNX2-213ENST00000514949 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.31
SNX2-213ENST00000514949 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
SNX2-213ENST00000514949 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
SNX2-213ENST00000514949 SBNO2Q9Y2G9 1366 aa23.19■■□□□ 1.3
SNX2-213ENST00000514949 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
SNX2-213ENST00000514949 MYO3AQ8NEV4 1616 aa23.19■■□□□ 1.3
SNX2-213ENST00000514949 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
SNX2-213ENST00000514949 UGGT1Q9NYU2 1555 aa23.17■■□□□ 1.3
SNX2-213ENST00000514949 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
SNX2-213ENST00000514949 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
SNX2-213ENST00000514949 ADGRB3O60242 1522 aa23.15■■□□□ 1.3
SNX2-213ENST00000514949 WDR43Q15061 677 aaKnown RBP eCLIP23.15■■□□□ 1.3
SNX2-213ENST00000514949 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
SNX2-213ENST00000514949 CFAP70Q5T0N1 1121 aa23.14■■□□□ 1.3
SNX2-213ENST00000514949 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
SNX2-213ENST00000514949 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
SNX2-213ENST00000514949 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
SNX2-213ENST00000514949 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
SNX2-213ENST00000514949 MS4A1P11836 297 aa23.12■■□□□ 1.29
SNX2-213ENST00000514949 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
SNX2-213ENST00000514949 DUSP27Q5VZP5 1158 aa23.11■■□□□ 1.29
SNX2-213ENST00000514949 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
SNX2-213ENST00000514949 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
SNX2-213ENST00000514949 ANP32AP39687 249 aaKnown RBP23.09■■□□□ 1.29
SNX2-213ENST00000514949 IPO9Q96P70 1041 aaKnown RBP23.08■■□□□ 1.29
SNX2-213ENST00000514949 FRMPD1Q5SYB0 1578 aa23.08■■□□□ 1.28
SNX2-213ENST00000514949 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
SNX2-213ENST00000514949 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
SNX2-213ENST00000514949 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
SNX2-213ENST00000514949 NPATQ14207 1427 aa23.06■■□□□ 1.28
SNX2-213ENST00000514949 PPLO60437 1756 aa23.05■■□□□ 1.28
SNX2-213ENST00000514949 PLIN1O60240 522 aa23.05■■□□□ 1.28
SNX2-213ENST00000514949 CRBNQ96SW2 442 aa23.05■■□□□ 1.28
SNX2-213ENST00000514949 NOS1P29475 1434 aa23.04■■□□□ 1.28
SNX2-213ENST00000514949 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
SNX2-213ENST00000514949 SLFN5Q08AF3 891 aa23.03■■□□□ 1.28
SNX2-213ENST00000514949 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
SNX2-213ENST00000514949 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
SNX2-213ENST00000514949 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
SNX2-213ENST00000514949 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
SNX2-213ENST00000514949 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
SNX2-213ENST00000514949 ZC3H13Q5T200 1668 aaKnown RBP23.01■■□□□ 1.27
SNX2-213ENST00000514949 CENPJQ9HC77 1338 aaPredicted RBP23.01■■□□□ 1.27
SNX2-213ENST00000514949 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
SNX2-213ENST00000514949 BACH2Q9BYV9 841 aa23■■□□□ 1.27
SNX2-213ENST00000514949 POLR3AO14802 1390 aaPredicted RBP23■■□□□ 1.27
SNX2-213ENST00000514949 PDE4AP27815 886 aa23■■□□□ 1.27
SNX2-213ENST00000514949 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
SNX2-213ENST00000514949 ABCC3O15438 1527 aa22.99■■□□□ 1.27
SNX2-213ENST00000514949 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
SNX2-213ENST00000514949 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.97■■□□□ 1.27
SNX2-213ENST00000514949 C20orf194Q5TEA3 1177 aa22.96■■□□□ 1.27
SNX2-213ENST00000514949 PUS7Q96PZ0 661 aaKnown RBP22.96■■□□□ 1.27
SNX2-213ENST00000514949 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
SNX2-213ENST00000514949 USP32Q8NFA0 1604 aa22.95■■□□□ 1.26
SNX2-213ENST00000514949 NEO1Q92859 1461 aa22.95■■□□□ 1.26
SNX2-213ENST00000514949 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
SNX2-213ENST00000514949 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
SNX2-213ENST00000514949 ZBTB47Q9UFB7 747 aaPredicted RBP22.93■■□□□ 1.26
SNX2-213ENST00000514949 E9PSI1 815 aa22.93■■□□□ 1.26
SNX2-213ENST00000514949 APAF1O14727 1248 aa22.93■■□□□ 1.26
SNX2-213ENST00000514949 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
SNX2-213ENST00000514949 CAMSAP1Q5T5Y3 1602 aa22.92■■□□□ 1.26
SNX2-213ENST00000514949 CENPQQ7L2Z9 268 aaPredicted RBP22.91■■□□□ 1.26
SNX2-213ENST00000514949 CCDC146Q8IYE0 955 aa22.9■■□□□ 1.26
SNX2-213ENST00000514949 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
SNX2-213ENST00000514949 NSD3Q9BZ95 1437 aa22.89■■□□□ 1.26
SNX2-213ENST00000514949 GGT6Q6P531 493 aa22.88■■□□□ 1.25
SNX2-213ENST00000514949 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
SNX2-213ENST00000514949 SIGLEC1Q9BZZ2 1709 aa22.88■■□□□ 1.25
SNX2-213ENST00000514949 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
SNX2-213ENST00000514949 SHPRHQ149N8 1683 aa22.88■■□□□ 1.25
SNX2-213ENST00000514949 TRAK1Q9UPV9 953 aa22.87■■□□□ 1.25
SNX2-213ENST00000514949 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
SNX2-213ENST00000514949 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
SNX2-213ENST00000514949 GLI2P10070 1586 aa22.85■■□□□ 1.25
SNX2-213ENST00000514949 ZFYVE9O95405 1425 aa22.85■■□□□ 1.25
SNX2-213ENST00000514949 DIP2CQ9Y2E4 1556 aa22.84■■□□□ 1.25
SNX2-213ENST00000514949 SLC12A5Q9H2X9 1139 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms