RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	ZEB1	P37275	1124 aa	Predicted RBP	12.89	□□□□□ -0.35
ACSF2-223	ENST00000513101	FOXD1	Q16676	465 aa		12.89	□□□□□ -0.35
ACSF2-223	ENST00000513101	DHX57	Q6P158	1386 aa	Known RBP	12.89	□□□□□ -0.35
ACSF2-223	ENST00000513101	TRPM2	O94759	1503 aa		12.88	□□□□□ -0.35
ACSF2-223	ENST00000513101	NEURL4	Q96JN8	1562 aa		12.88	□□□□□ -0.35
ACSF2-223	ENST00000513101	ZFYVE9	O95405	1425 aa		12.88	□□□□□ -0.35
ACSF2-223	ENST00000513101	RIMS2	Q9UQ26	1411 aa		12.88	□□□□□ -0.35
ACSF2-223	ENST00000513101	TMEM131L	A2VDJ0	1609 aa		12.87	□□□□□ -0.35
ACSF2-223	ENST00000513101	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.86	□□□□□ -0.35
ACSF2-223	ENST00000513101	SPHKAP	Q2M3C7	1700 aa		12.85	□□□□□ -0.35
ACSF2-223	ENST00000513101	PLEKHG1	Q9ULL1	1385 aa		12.85	□□□□□ -0.35
ACSF2-223	ENST00000513101	PPP1R15A	O75807	674 aa	Predicted RBP	12.85	□□□□□ -0.35
ACSF2-223	ENST00000513101	ZNF326	Q5BKZ1	582 aa	Known RBP	12.85	□□□□□ -0.35
ACSF2-223	ENST00000513101	CCDC144A	A2RUR9	1427 aa		12.84	□□□□□ -0.35
ACSF2-223	ENST00000513101	RPGRIP1L	Q68CZ1	1315 aa		12.84	□□□□□ -0.35
ACSF2-223	ENST00000513101	POLR1A	O95602	1720 aa	Predicted RBP	12.83	□□□□□ -0.36
ACSF2-223	ENST00000513101	CCER1	Q8TC90	406 aa	Predicted RBP	12.83	□□□□□ -0.36
ACSF2-223	ENST00000513101	TBX22	Q9Y458	520 aa		12.83	□□□□□ -0.36
ACSF2-223	ENST00000513101	CLTCL1	P53675	1640 aa		12.82	□□□□□ -0.36
ACSF2-223	ENST00000513101	LTBP4	Q8N2S1	1624 aa		12.82	□□□□□ -0.36
ACSF2-223	ENST00000513101	SLC26A8	Q96RN1	970 aa		12.82	□□□□□ -0.36
ACSF2-223	ENST00000513101	ANKRD30B	Q9BXX2	1392 aa		12.81	□□□□□ -0.36
ACSF2-223	ENST00000513101	VGF	O15240	615 aa	Predicted RBP	12.81	□□□□□ -0.36
ACSF2-223	ENST00000513101	BCAN	Q96GW7	911 aa		12.81	□□□□□ -0.36
ACSF2-223	ENST00000513101	IQGAP1	P46940	1657 aa		12.8	□□□□□ -0.36
ACSF2-223	ENST00000513101	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.8	□□□□□ -0.36
ACSF2-223	ENST00000513101	KCNA6	P17658	529 aa		12.79	□□□□□ -0.36
ACSF2-223	ENST00000513101	SPATA31E1	Q6ZUB1	1445 aa		12.79	□□□□□ -0.36
ACSF2-223	ENST00000513101	RGL3	Q3MIN7	710 aa		12.78	□□□□□ -0.36
ACSF2-223	ENST00000513101	IQSEC2	Q5JU85	1478 aa		12.78	□□□□□ -0.36
ACSF2-223	ENST00000513101	CPS1	P31327	1500 aa		12.78	□□□□□ -0.36
ACSF2-223	ENST00000513101	PIK3R4	Q99570	1358 aa		12.77	□□□□□ -0.37
ACSF2-223	ENST00000513101	ADAMTS13	Q76LX8	1427 aa		12.77	□□□□□ -0.37
ACSF2-223	ENST00000513101	NEXMIF	Q5QGS0	1516 aa		12.76	□□□□□ -0.37
ACSF2-223	ENST00000513101	MYO5B	Q9ULV0	1848 aa		12.75	□□□□□ -0.37
ACSF2-223	ENST00000513101	KIF1B	O60333	1816 aa		12.74	□□□□□ -0.37
ACSF2-223	ENST00000513101	STAC3	Q96MF2	364 aa		12.74	□□□□□ -0.37
ACSF2-223	ENST00000513101	DIP2A	Q14689	1571 aa		12.73	□□□□□ -0.37
ACSF2-223	ENST00000513101	SETBP1	Q9Y6X0	1596 aa		12.73	□□□□□ -0.37
ACSF2-223	ENST00000513101	LRRC7	Q96NW7	1537 aa		12.72	□□□□□ -0.37
ACSF2-223	ENST00000513101	ADGRF5	Q8IZF2	1346 aa		12.71	□□□□□ -0.37
ACSF2-223	ENST00000513101	PROSER2	Q86WR7	435 aa	Predicted RBP	12.71	□□□□□ -0.37
ACSF2-223	ENST00000513101	AMOTL2	Q9Y2J4	779 aa		12.71	□□□□□ -0.37
ACSF2-223	ENST00000513101	MET	P08581	1390 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	UBAP1L	F5GYI3	381 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	TOM1	O60784	492 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	TIMELESS	Q9UNS1	1208 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	NKTR	P30414	1462 aa	Known RBP	12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	NCOA3	Q9Y6Q9	1424 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	TMEM94	Q12767	1356 aa		12.69	□□□□□ -0.38
ACSF2-223	ENST00000513101	PTPRU	Q92729	1446 aa		12.68	□□□□□ -0.38
ACSF2-223	ENST00000513101	NWD1	Q149M9	1564 aa		12.68	□□□□□ -0.38
ACSF2-223	ENST00000513101	NRXN3	Q9Y4C0	1643 aa		12.67	□□□□□ -0.38
ACSF2-223	ENST00000513101	DCAF11	Q8TEB1	546 aa		12.67	□□□□□ -0.38
ACSF2-223	ENST00000513101	C14orf93	Q9H972	538 aa	Known RBP	12.67	□□□□□ -0.38
ACSF2-223	ENST00000513101	STRCP1	A6NGW2	1772 aa		12.66	□□□□□ -0.38
ACSF2-223	ENST00000513101	MYOM2	P54296	1465 aa		12.66	□□□□□ -0.38
ACSF2-223	ENST00000513101	PIK3C2G	O75747	1445 aa		12.66	□□□□□ -0.38
ACSF2-223	ENST00000513101	NRXN1	Q9ULB1	1477 aa		12.65	□□□□□ -0.38
ACSF2-223	ENST00000513101	PPL	O60437	1756 aa		12.65	□□□□□ -0.38
ACSF2-223	ENST00000513101	ALK	Q9UM73	1620 aa		12.65	□□□□□ -0.38
ACSF2-223	ENST00000513101	SIN3A	Q96ST3	1273 aa		12.64	□□□□□ -0.39
ACSF2-223	ENST00000513101	KDM2A	Q9Y2K7	1162 aa		12.64	□□□□□ -0.39
ACSF2-223	ENST00000513101	CHD2	O14647	1828 aa	Known RBP	12.64	□□□□□ -0.39
ACSF2-223	ENST00000513101	PRAG1	Q86YV5	1406 aa		12.63	□□□□□ -0.39
ACSF2-223	ENST00000513101	CFAP70	Q5T0N1	1121 aa		12.63	□□□□□ -0.39
ACSF2-223	ENST00000513101	RBM33	Q96EV2	1170 aa	Known RBP	12.63	□□□□□ -0.39
ACSF2-223	ENST00000513101	C19orf44	Q9H6X5	657 aa		12.63	□□□□□ -0.39
ACSF2-223	ENST00000513101	MSH6	P52701	1360 aa		12.62	□□□□□ -0.39
ACSF2-223	ENST00000513101	ABCC11	Q96J66	1382 aa		12.62	□□□□□ -0.39
ACSF2-223	ENST00000513101	LRPPRC	P42704	1394 aa	Known RBP	12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	NEUROD1	Q13562	356 aa		12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	TMEM132E	Q6IEE7	984 aa		12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	SIRT1	Q96EB6	747 aa		12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	IFT172	Q9UG01	1749 aa		12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	PTCH1	Q13635	1447 aa		12.61	□□□□□ -0.39
ACSF2-223	ENST00000513101	C14orf37	Q86TY3	774 aa		12.6	□□□□□ -0.39
ACSF2-223	ENST00000513101	CADPS2	Q86UW7	1296 aa		12.6	□□□□□ -0.39
ACSF2-223	ENST00000513101	L3MBTL2	Q969R5	705 aa		12.6	□□□□□ -0.39
ACSF2-223	ENST00000513101	ROBO2	Q9HCK4	1378 aa		12.59	□□□□□ -0.39
ACSF2-223	ENST00000513101	PIP4K2B	P78356	416 aa		12.59	□□□□□ -0.39
ACSF2-223	ENST00000513101	TECPR2	O15040	1411 aa		12.59	□□□□□ -0.39
ACSF2-223	ENST00000513101	XRN1	Q8IZH2	1706 aa	Known RBP	12.59	□□□□□ -0.39
ACSF2-223	ENST00000513101	SETD1A	O15047	1707 aa	Known RBP	12.58	□□□□□ -0.4
ACSF2-223	ENST00000513101	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.58	□□□□□ -0.4
ACSF2-223	ENST00000513101	SLAIN2	Q9P270	581 aa		12.58	□□□□□ -0.4
ACSF2-223	ENST00000513101	STK26	Q9P289	416 aa		12.58	□□□□□ -0.4
ACSF2-223	ENST00000513101	FAM135B	Q49AJ0	1406 aa		12.57	□□□□□ -0.4
ACSF2-223	ENST00000513101	ATF3	P18847	181 aa		12.57	□□□□□ -0.4
ACSF2-223	ENST00000513101	SCAF1	Q9H7N4	1312 aa	Known RBP	12.57	□□□□□ -0.4
ACSF2-223	ENST00000513101	DCC	P43146	1447 aa		12.56	□□□□□ -0.4
ACSF2-223	ENST00000513101	ASXL1	Q8IXJ9	1541 aa		12.56	□□□□□ -0.4
ACSF2-223	ENST00000513101	XIRP1	Q702N8	1843 aa	Known RBP	12.55	□□□□□ -0.4
ACSF2-223	ENST00000513101	ADGRL3	Q9HAR2	1447 aa		12.55	□□□□□ -0.4
ACSF2-223	ENST00000513101	WAPL	Q7Z5K2	1190 aa		12.55	□□□□□ -0.4
ACSF2-223	ENST00000513101	LAMC1	P11047	1609 aa		12.54	□□□□□ -0.4
ACSF2-223	ENST00000513101	ADGRB1	O14514	1584 aa		12.53	□□□□□ -0.4
ACSF2-223	ENST00000513101	TRAK1	Q9UPV9	953 aa		12.52	□□□□□ -0.41
ACSF2-223	ENST00000513101	TONSL	Q96HA7	1378 aa		12.52	□□□□□ -0.41
ACSF2-223	ENST00000513101	HSPA1L	P34931	641 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms