RNA–Protein interactions for RNA: ENST00000508660.5

ATP2C1-215, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2C1, Length 943 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-215ENST00000508660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
ATP2C1-215ENST00000508660 MED14O60244 1454 aa11.8□□□□□ -0.52
ATP2C1-215ENST00000508660 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-215ENST00000508660 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
ATP2C1-215ENST00000508660 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
ATP2C1-215ENST00000508660 FBXO31Q5XUX0 539 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-215ENST00000508660 IER5LQ5T953 404 aa11.77□□□□□ -0.53
ATP2C1-215ENST00000508660 GGT6Q6P531 493 aa11.77□□□□□ -0.53
ATP2C1-215ENST00000508660 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
ATP2C1-215ENST00000508660 ABCC1P33527 1531 aa11.76□□□□□ -0.53
ATP2C1-215ENST00000508660 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
ATP2C1-215ENST00000508660 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
ATP2C1-215ENST00000508660 SYNMO15061 1565 aa11.75□□□□□ -0.53
ATP2C1-215ENST00000508660 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
ATP2C1-215ENST00000508660 IQGAP1P46940 1657 aa11.74□□□□□ -0.53
ATP2C1-215ENST00000508660 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
ATP2C1-215ENST00000508660 TNRQ92752 1358 aa11.73□□□□□ -0.53
ATP2C1-215ENST00000508660 EP400Q96L91 3159 aa11.73□□□□□ -0.53
ATP2C1-215ENST00000508660 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
ATP2C1-215ENST00000508660 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
ATP2C1-215ENST00000508660 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-215ENST00000508660 SEC24BO95487 1268 aa11.71□□□□□ -0.53
ATP2C1-215ENST00000508660 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
ATP2C1-215ENST00000508660 TROQ12816 1431 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-215ENST00000508660 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-215ENST00000508660 A2MP01023 1474 aa11.7□□□□□ -0.54
ATP2C1-215ENST00000508660 ROBO1Q9Y6N7 1651 aa11.69□□□□□ -0.54
ATP2C1-215ENST00000508660 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
ATP2C1-215ENST00000508660 LRP6O75581 1613 aa11.69□□□□□ -0.54
ATP2C1-215ENST00000508660 SETBP1Q9Y6X0 1596 aa11.69□□□□□ -0.54
ATP2C1-215ENST00000508660 RXRBP28702 533 aa11.68□□□□□ -0.54
ATP2C1-215ENST00000508660 ZNF772Q68DY9 489 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-215ENST00000508660 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-215ENST00000508660 ZC3H13Q5T200 1668 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-215ENST00000508660 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
ATP2C1-215ENST00000508660 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
ATP2C1-215ENST00000508660 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
ATP2C1-215ENST00000508660 JCADQ9P266 1359 aa11.67□□□□□ -0.54
ATP2C1-215ENST00000508660 PSEN1P49768 467 aa11.66□□□□□ -0.54
ATP2C1-215ENST00000508660 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.545e-7■■■■■ 28.1
ATP2C1-215ENST00000508660 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
ATP2C1-215ENST00000508660 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
ATP2C1-215ENST00000508660 ATP7AQ04656 1500 aa11.65□□□□□ -0.55
ATP2C1-215ENST00000508660 PZPP20742 1482 aa11.64□□□□□ -0.55
ATP2C1-215ENST00000508660 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
ATP2C1-215ENST00000508660 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
ATP2C1-215ENST00000508660 SCUBE2Q9NQ36 999 aa11.63□□□□□ -0.55
ATP2C1-215ENST00000508660 TMEM94Q12767 1356 aa11.63□□□□□ -0.55
ATP2C1-215ENST00000508660 PHLPP1O60346 1717 aa11.63□□□□□ -0.55
ATP2C1-215ENST00000508660 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
ATP2C1-215ENST00000508660 CLIP1P30622 1438 aa11.62□□□□□ -0.55
ATP2C1-215ENST00000508660 PLCG2P16885 1265 aa11.62□□□□□ -0.55
ATP2C1-215ENST00000508660 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
ATP2C1-215ENST00000508660 INO80Q9ULG1 1556 aaPredicted RBP11.62□□□□□ -0.55
ATP2C1-215ENST00000508660 SYCP2Q9BX26 1530 aa11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 KDM5DQ9BY66 1539 aa11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 CDC42BPAQ5VT25 1732 aa11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
ATP2C1-215ENST00000508660 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
ATP2C1-215ENST00000508660 LTKP29376 864 aa11.6□□□□□ -0.55
ATP2C1-215ENST00000508660 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
ATP2C1-215ENST00000508660 RGS12O14924 1447 aa11.6□□□□□ -0.55
ATP2C1-215ENST00000508660 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-215ENST00000508660 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
ATP2C1-215ENST00000508660 SPATA31A6Q5VVP1 1343 aa11.59□□□□□ -0.55
ATP2C1-215ENST00000508660 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
ATP2C1-215ENST00000508660 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
ATP2C1-215ENST00000508660 SLAIN2Q9P270 581 aa11.57□□□□□ -0.56
ATP2C1-215ENST00000508660 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-215ENST00000508660 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-215ENST00000508660 NUTM2DQ5VT03 806 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-215ENST00000508660 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-215ENST00000508660 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
ATP2C1-215ENST00000508660 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
ATP2C1-215ENST00000508660 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
ATP2C1-215ENST00000508660 WASHC2CQ9Y4E1 1318 aa11.55□□□□□ -0.56
ATP2C1-215ENST00000508660 FMN1Q68DA7 1419 aa11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 KIAA1107Q9UPP5 1409 aa11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 KIF3BO15066 747 aa11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 PROSER2Q86WR7 435 aaPredicted RBP11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 AFF2P51816 1311 aa11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
ATP2C1-215ENST00000508660 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
ATP2C1-215ENST00000508660 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-215ENST00000508660 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-215ENST00000508660 NCOA2Q15596 1464 aa11.52□□□□□ -0.56
ATP2C1-215ENST00000508660 KCNA6P17658 529 aa11.52□□□□□ -0.57
ATP2C1-215ENST00000508660 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
ATP2C1-215ENST00000508660 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
ATP2C1-215ENST00000508660 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
ATP2C1-215ENST00000508660 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
ATP2C1-215ENST00000508660 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
ATP2C1-215ENST00000508660 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
ATP2C1-215ENST00000508660 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
ATP2C1-215ENST00000508660 SHPRHQ149N8 1683 aa11.51□□□□□ -0.57
ATP2C1-215ENST00000508660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.579e-7■■■□□ 17.5
ATP2C1-215ENST00000508660 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms