RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
SKI-204ENST00000508416 NEURL4Q96JN8 1562 aa15.53■□□□□ 0.08
SKI-204ENST00000508416 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.08
SKI-204ENST00000508416 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
SKI-204ENST00000508416 RIMS2Q9UQ26 1411 aa15.51■□□□□ 0.07
SKI-204ENST00000508416 MED14O60244 1454 aa15.51■□□□□ 0.07
SKI-204ENST00000508416 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
SKI-204ENST00000508416 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
SKI-204ENST00000508416 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
SKI-204ENST00000508416 IQGAP1P46940 1657 aa15.49■□□□□ 0.07
SKI-204ENST00000508416 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
SKI-204ENST00000508416 BCANQ96GW7 911 aa15.49■□□□□ 0.07
SKI-204ENST00000508416 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
SKI-204ENST00000508416 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
SKI-204ENST00000508416 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
SKI-204ENST00000508416 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
SKI-204ENST00000508416 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
SKI-204ENST00000508416 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
SKI-204ENST00000508416 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
SKI-204ENST00000508416 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
SKI-204ENST00000508416 ZNF335Q9H4Z2 1342 aaPredicted RBP15.43■□□□□ 0.06
SKI-204ENST00000508416 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
SKI-204ENST00000508416 VGFO15240 615 aaPredicted RBP15.42■□□□□ 0.06
SKI-204ENST00000508416 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
SKI-204ENST00000508416 DHX57Q6P158 1386 aaKnown RBP15.4■□□□□ 0.06
SKI-204ENST00000508416 PPLO60437 1756 aa15.39■□□□□ 0.05
SKI-204ENST00000508416 TBX22Q9Y458 520 aa15.39■□□□□ 0.05
SKI-204ENST00000508416 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
SKI-204ENST00000508416 ADAMTS13Q76LX8 1427 aa15.36■□□□□ 0.05
SKI-204ENST00000508416 IFT172Q9UG01 1749 aa15.35■□□□□ 0.05
SKI-204ENST00000508416 STRCP1A6NGW2 1772 aa15.35■□□□□ 0.05
SKI-204ENST00000508416 KCNA6P17658 529 aa15.35■□□□□ 0.05
SKI-204ENST00000508416 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
SKI-204ENST00000508416 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
SKI-204ENST00000508416 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
SKI-204ENST00000508416 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
SKI-204ENST00000508416 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
SKI-204ENST00000508416 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
SKI-204ENST00000508416 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
SKI-204ENST00000508416 CHD2O14647 1828 aaKnown RBP15.33■□□□□ 0.04
SKI-204ENST00000508416 CPS1P31327 1500 aa15.33■□□□□ 0.04
SKI-204ENST00000508416 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
SKI-204ENST00000508416 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
SKI-204ENST00000508416 PROSER2Q86WR7 435 aaPredicted RBP15.3■□□□□ 0.04
SKI-204ENST00000508416 ALKQ9UM73 1620 aa15.29■□□□□ 0.04
SKI-204ENST00000508416 METP08581 1390 aa15.29■□□□□ 0.04
SKI-204ENST00000508416 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
SKI-204ENST00000508416 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
SKI-204ENST00000508416 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
SKI-204ENST00000508416 MYOM2P54296 1465 aa15.28■□□□□ 0.04
SKI-204ENST00000508416 PTPRUQ92729 1446 aa15.27■□□□□ 0.04
SKI-204ENST00000508416 NWD1Q149M9 1564 aa15.27■□□□□ 0.03
SKI-204ENST00000508416 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
SKI-204ENST00000508416 SETD1AO15047 1707 aaKnown RBP15.26■□□□□ 0.03
SKI-204ENST00000508416 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
SKI-204ENST00000508416 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
SKI-204ENST00000508416 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
SKI-204ENST00000508416 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
SKI-204ENST00000508416 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
SKI-204ENST00000508416 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
SKI-204ENST00000508416 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
SKI-204ENST00000508416 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
SKI-204ENST00000508416 XIRP1Q702N8 1843 aaKnown RBP15.24■□□□□ 0.03
SKI-204ENST00000508416 TMEM94Q12767 1356 aa15.24■□□□□ 0.03
SKI-204ENST00000508416 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
SKI-204ENST00000508416 STK26Q9P289 416 aa15.22■□□□□ 0.03
SKI-204ENST00000508416 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
SKI-204ENST00000508416 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
SKI-204ENST00000508416 CCER1Q8TC90 406 aaPredicted RBP15.21■□□□□ 0.03
SKI-204ENST00000508416 LAMC1P11047 1609 aa15.2■□□□□ 0.02
SKI-204ENST00000508416 TOM1O60784 492 aa15.19■□□□□ 0.02
SKI-204ENST00000508416 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
SKI-204ENST00000508416 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
SKI-204ENST00000508416 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
SKI-204ENST00000508416 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
SKI-204ENST00000508416 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
SKI-204ENST00000508416 ROBO2Q9HCK4 1378 aa15.17■□□□□ 0.02
SKI-204ENST00000508416 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
SKI-204ENST00000508416 MSH6P52701 1360 aa15.16■□□□□ 0.02
SKI-204ENST00000508416 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
SKI-204ENST00000508416 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
SKI-204ENST00000508416 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
SKI-204ENST00000508416 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 NBPF1Q3BBV0 1214 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 WAPLQ7Z5K2 1190 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 PTCH1Q13635 1447 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
SKI-204ENST00000508416 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
SKI-204ENST00000508416 TECPR2O15040 1411 aa15.13■□□□□ 0.01
SKI-204ENST00000508416 ATF3P18847 181 aa15.13■□□□□ 0.01
SKI-204ENST00000508416 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
SKI-204ENST00000508416 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.13■□□□□ 0.01
SKI-204ENST00000508416 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
SKI-204ENST00000508416 NBPF8Q3BBV2 869 aa15.12■□□□□ 0.01
SKI-204ENST00000508416 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
SKI-204ENST00000508416 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
SKI-204ENST00000508416 POGKQ9P215 609 aa15.1■□□□□ 0.01
SKI-204ENST00000508416 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms