RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
RFC1-207ENST00000504554 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
RFC1-207ENST00000504554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
RFC1-207ENST00000504554 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
RFC1-207ENST00000504554 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
RFC1-207ENST00000504554 CEP152O94986 1710 aa12.28□□□□□ -0.44
RFC1-207ENST00000504554 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
RFC1-207ENST00000504554 ERVK-7P63135 1459 aa12.28□□□□□ -0.44
RFC1-207ENST00000504554 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
RFC1-207ENST00000504554 ZNF142P52746 1687 aaPredicted RBP12.28□□□□□ -0.44
RFC1-207ENST00000504554 SPATA31D1Q6ZQQ2 1576 aa12.27□□□□□ -0.44
RFC1-207ENST00000504554 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.45
RFC1-207ENST00000504554 ROCK1Q13464 1354 aa12.27□□□□□ -0.45
RFC1-207ENST00000504554 CLCN6P51797 869 aa12.26□□□□□ -0.45
RFC1-207ENST00000504554 PTPRTO14522 1441 aa12.26□□□□□ -0.45
RFC1-207ENST00000504554 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
RFC1-207ENST00000504554 LMTK2Q8IWU2 1503 aa12.26□□□□□ -0.45
RFC1-207ENST00000504554 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
RFC1-207ENST00000504554 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
RFC1-207ENST00000504554 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
RFC1-207ENST00000504554 KANK1Q14678 1352 aa12.23□□□□□ -0.45
RFC1-207ENST00000504554 PKD2Q13563 968 aa12.21□□□□□ -0.45
RFC1-207ENST00000504554 LHX8Q68G74 356 aa12.21□□□□□ -0.45
RFC1-207ENST00000504554 UGGT1Q9NYU2 1555 aa12.21□□□□□ -0.46
RFC1-207ENST00000504554 EFCAB6Q5THR3 1501 aa12.21□□□□□ -0.46
RFC1-207ENST00000504554 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
RFC1-207ENST00000504554 NEURL4Q96JN8 1562 aa12.2□□□□□ -0.46
RFC1-207ENST00000504554 NOS1P29475 1434 aa12.2□□□□□ -0.46
RFC1-207ENST00000504554 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
RFC1-207ENST00000504554 UNC13BO14795 1591 aa12.19□□□□□ -0.46
RFC1-207ENST00000504554 SYNMO15061 1565 aa12.19□□□□□ -0.46
RFC1-207ENST00000504554 IDI1Q13907 227 aa12.19□□□□□ -0.46
RFC1-207ENST00000504554 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
RFC1-207ENST00000504554 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
RFC1-207ENST00000504554 FBXO41Q8TF61 875 aa12.18□□□□□ -0.46
RFC1-207ENST00000504554 NAIPQ13075 1403 aa12.18□□□□□ -0.46
RFC1-207ENST00000504554 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
RFC1-207ENST00000504554 NUP155O75694 1391 aa12.17□□□□□ -0.46
RFC1-207ENST00000504554 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
RFC1-207ENST00000504554 LTKP29376 864 aa12.16□□□□□ -0.46
RFC1-207ENST00000504554 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
RFC1-207ENST00000504554 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
RFC1-207ENST00000504554 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
RFC1-207ENST00000504554 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
RFC1-207ENST00000504554 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
RFC1-207ENST00000504554 PIK3C2BO00750 1634 aa12.15□□□□□ -0.47
RFC1-207ENST00000504554 MED14O60244 1454 aa12.14□□□□□ -0.47
RFC1-207ENST00000504554 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
RFC1-207ENST00000504554 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
RFC1-207ENST00000504554 TET3O43151 1660 aa12.14□□□□□ -0.47
RFC1-207ENST00000504554 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
RFC1-207ENST00000504554 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
RFC1-207ENST00000504554 SLIT1O75093 1534 aa12.13□□□□□ -0.47
RFC1-207ENST00000504554 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
RFC1-207ENST00000504554 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
RFC1-207ENST00000504554 TMEM2Q9UHN6 1383 aa12.12□□□□□ -0.47
RFC1-207ENST00000504554 E9PCH4 1651 aa12.12□□□□□ -0.47
RFC1-207ENST00000504554 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
RFC1-207ENST00000504554 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
RFC1-207ENST00000504554 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
RFC1-207ENST00000504554 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
RFC1-207ENST00000504554 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
RFC1-207ENST00000504554 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
RFC1-207ENST00000504554 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
RFC1-207ENST00000504554 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
RFC1-207ENST00000504554 ZFYVE9O95405 1425 aa12.07□□□□□ -0.48
RFC1-207ENST00000504554 TRIM52Q96A61 297 aa12.06□□□□□ -0.48
RFC1-207ENST00000504554 TMEM131LA2VDJ0 1609 aa12.06□□□□□ -0.48
RFC1-207ENST00000504554 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
RFC1-207ENST00000504554 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
RFC1-207ENST00000504554 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
RFC1-207ENST00000504554 EID1Q9Y6B2 187 aa12.05□□□□□ -0.48
RFC1-207ENST00000504554 RIMS2Q9UQ26 1411 aa12.04□□□□□ -0.48
RFC1-207ENST00000504554 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
RFC1-207ENST00000504554 SLC26A8Q96RN1 970 aa12.04□□□□□ -0.48
RFC1-207ENST00000504554 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
RFC1-207ENST00000504554 CPS1P31327 1500 aa12.02□□□□□ -0.48
RFC1-207ENST00000504554 MYO5BQ9ULV0 1848 aa12.02□□□□□ -0.49
RFC1-207ENST00000504554 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
RFC1-207ENST00000504554 UBAP1LF5GYI3 381 aa12□□□□□ -0.49
RFC1-207ENST00000504554 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
RFC1-207ENST00000504554 TRPM2O94759 1503 aa12□□□□□ -0.49
RFC1-207ENST00000504554 CLTCL1P53675 1640 aa12□□□□□ -0.49
RFC1-207ENST00000504554 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
RFC1-207ENST00000504554 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
RFC1-207ENST00000504554 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
RFC1-207ENST00000504554 SETD5Q9C0A6 1442 aa11.99□□□□□ -0.49
RFC1-207ENST00000504554 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
RFC1-207ENST00000504554 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
RFC1-207ENST00000504554 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
RFC1-207ENST00000504554 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
RFC1-207ENST00000504554 PPP1R15AO75807 674 aaPredicted RBP11.97□□□□□ -0.49
RFC1-207ENST00000504554 KCNA6P17658 529 aa11.97□□□□□ -0.49
RFC1-207ENST00000504554 MIER1Q8N108 512 aa11.97□□□□□ -0.49
RFC1-207ENST00000504554 BCANQ96GW7 911 aa11.97□□□□□ -0.49
RFC1-207ENST00000504554 RAB3GAP2Q9H2M9 1393 aa11.96□□□□□ -0.49
RFC1-207ENST00000504554 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFC1-207ENST00000504554 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
RFC1-207ENST00000504554 ZNF326Q5BKZ1 582 aaKnown RBP11.95□□□□□ -0.5
RFC1-207ENST00000504554 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms