RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
SNX25-202ENST00000504273 E9PCH4 1651 aa9.79□□□□□ -0.84
SNX25-202ENST00000504273 A2ML1A8K2U0 1454 aa9.78□□□□□ -0.84
SNX25-202ENST00000504273 A2MP01023 1474 aa9.77□□□□□ -0.85
SNX25-202ENST00000504273 ERBINQ96RT1 1412 aa9.77□□□□□ -0.85
SNX25-202ENST00000504273 DEPDC5O75140 1603 aa9.77□□□□□ -0.85
SNX25-202ENST00000504273 LRRC7Q96NW7 1537 aa9.77□□□□□ -0.85
SNX25-202ENST00000504273 DIP2CQ9Y2E4 1556 aa9.76□□□□□ -0.85
SNX25-202ENST00000504273 PRAG1Q86YV5 1406 aa9.76□□□□□ -0.85
SNX25-202ENST00000504273 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
SNX25-202ENST00000504273 MLH3Q9UHC1 1453 aa9.76□□□□□ -0.85
SNX25-202ENST00000504273 INO80Q9ULG1 1556 aaPredicted RBP9.76□□□□□ -0.85
SNX25-202ENST00000504273 MED14O60244 1454 aa9.75□□□□□ -0.85
SNX25-202ENST00000504273 LAMC1P11047 1609 aa9.75□□□□□ -0.85
SNX25-202ENST00000504273 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
SNX25-202ENST00000504273 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
SNX25-202ENST00000504273 EFCAB2Q5VUJ9 269 aa9.74□□□□□ -0.85
SNX25-202ENST00000504273 LRP5O75197 1615 aa9.74□□□□□ -0.85
SNX25-202ENST00000504273 ZMYM3Q14202 1370 aa9.74□□□□□ -0.85
SNX25-202ENST00000504273 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
SNX25-202ENST00000504273 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
SNX25-202ENST00000504273 MROH1Q8NDA8 1641 aa9.73□□□□□ -0.85
SNX25-202ENST00000504273 NEURL4Q96JN8 1562 aa9.73□□□□□ -0.85
SNX25-202ENST00000504273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNX25-202ENST00000504273 CCDC144AA2RUR9 1427 aa9.73□□□□□ -0.85
SNX25-202ENST00000504273 AFAP1Q8N556 730 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
SNX25-202ENST00000504273 PRDM15P57071 1507 aaPredicted RBP9.72□□□□□ -0.85
SNX25-202ENST00000504273 CEP152O94986 1710 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 SPHKAPQ2M3C7 1700 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 GPRASP1Q5JY77 1395 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 ST20-MTHFSA0A0A6YYL1 179 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
SNX25-202ENST00000504273 FKBP8Q14318 412 aa9.71□□□□□ -0.85
SNX25-202ENST00000504273 HNRNPUQ00839 825 aaKnown RBP eCLIP9.71□□□□□ -0.86
SNX25-202ENST00000504273 ATP7AQ04656 1500 aa9.71□□□□□ -0.86
SNX25-202ENST00000504273 JCADQ9P266 1359 aa9.71□□□□□ -0.86
SNX25-202ENST00000504273 CLTCL1P53675 1640 aa9.71□□□□□ -0.86
SNX25-202ENST00000504273 KIDINS220Q9ULH0 1771 aa9.7□□□□□ -0.86
SNX25-202ENST00000504273 RXRBP28702 533 aa9.7□□□□□ -0.86
SNX25-202ENST00000504273 ANKLE2Q86XL3 938 aa9.7□□□□□ -0.86
SNX25-202ENST00000504273 TET3O43151 1660 aa9.7□□□□□ -0.86
SNX25-202ENST00000504273 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
SNX25-202ENST00000504273 SPATA31A6Q5VVP1 1343 aa9.69□□□□□ -0.86
SNX25-202ENST00000504273 TRPM2O94759 1503 aa9.69□□□□□ -0.86
SNX25-202ENST00000504273 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
SNX25-202ENST00000504273 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
SNX25-202ENST00000504273 SPAG9O60271 1321 aaKnown RBP9.68□□□□□ -0.86
SNX25-202ENST00000504273 NPHP4O75161 1426 aaPredicted RBP9.68□□□□□ -0.86
SNX25-202ENST00000504273 IQGAP1P46940 1657 aa9.68□□□□□ -0.86
SNX25-202ENST00000504273 EIF2AK4Q9P2K8 1649 aaKnown RBP9.68□□□□□ -0.86
SNX25-202ENST00000504273 BCANQ96GW7 911 aa9.68□□□□□ -0.86
SNX25-202ENST00000504273 MRS2Q9HD23 443 aa9.68□□□□□ -0.86
SNX25-202ENST00000504273 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
SNX25-202ENST00000504273 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
SNX25-202ENST00000504273 TESK2Q96S53 571 aa9.67□□□□□ -0.86
SNX25-202ENST00000504273 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
SNX25-202ENST00000504273 ATAD2Q6PL18 1390 aa9.66□□□□□ -0.86
SNX25-202ENST00000504273 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
SNX25-202ENST00000504273 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
SNX25-202ENST00000504273 THEMISQ8N1K5 641 aaPredicted RBP9.65□□□□□ -0.86
SNX25-202ENST00000504273 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
SNX25-202ENST00000504273 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
SNX25-202ENST00000504273 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
SNX25-202ENST00000504273 ZBED9Q6R2W3 1325 aa9.64□□□□□ -0.87
SNX25-202ENST00000504273 PNISRQ8TF01 805 aaKnown RBP9.63□□□□□ -0.87
SNX25-202ENST00000504273 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
SNX25-202ENST00000504273 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
SNX25-202ENST00000504273 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
SNX25-202ENST00000504273 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
SNX25-202ENST00000504273 LRPPRCP42704 1394 aaKnown RBP9.61□□□□□ -0.87
SNX25-202ENST00000504273 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
SNX25-202ENST00000504273 NLRP1Q9C000 1473 aa9.61□□□□□ -0.87
SNX25-202ENST00000504273 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
SNX25-202ENST00000504273 MYOM1P52179 1685 aa9.61□□□□□ -0.87
SNX25-202ENST00000504273 PARD3Q8TEW0 1356 aa9.6□□□□□ -0.87
SNX25-202ENST00000504273 LMTK2Q8IWU2 1503 aa9.6□□□□□ -0.87
SNX25-202ENST00000504273 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
SNX25-202ENST00000504273 KIF1BO60333 1816 aa9.6□□□□□ -0.87
SNX25-202ENST00000504273 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
SNX25-202ENST00000504273 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
SNX25-202ENST00000504273 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
SNX25-202ENST00000504273 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
SNX25-202ENST00000504273 STRCP1A6NGW2 1772 aa9.59□□□□□ -0.87
SNX25-202ENST00000504273 KIF3BO15066 747 aa9.59□□□□□ -0.87
SNX25-202ENST00000504273 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
SNX25-202ENST00000504273 SMG6Q86US8 1419 aaKnown RBP9.58□□□□□ -0.88
SNX25-202ENST00000504273 BRD4O60885 1362 aaPredicted RBP9.58□□□□□ -0.88
SNX25-202ENST00000504273 KTN1Q86UP2 1357 aaKnown RBP9.58□□□□□ -0.88
SNX25-202ENST00000504273 MYBBP1AQ9BQG0 1328 aaKnown RBP9.58□□□□□ -0.88
SNX25-202ENST00000504273 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
SNX25-202ENST00000504273 SHPRHQ149N8 1683 aa9.57□□□□□ -0.88
SNX25-202ENST00000504273 ABCC3O15438 1527 aa9.57□□□□□ -0.88
SNX25-202ENST00000504273 CFAP65Q6ZU64 1925 aaKnown RBP9.57□□□□□ -0.88
SNX25-202ENST00000504273 TNRQ92752 1358 aa9.57□□□□□ -0.88
SNX25-202ENST00000504273 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
SNX25-202ENST00000504273 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
SNX25-202ENST00000504273 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
SNX25-202ENST00000504273 NEFLP07196 543 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms