RNA–Protein interactions for RNA: ENST00000502929.5

MATR3-232, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 4,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-232ENST00000502929 PTPRTO14522 1441 aa10.72□□□□□ -0.69
MATR3-232ENST00000502929 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
MATR3-232ENST00000502929 PER1O15534 1290 aaPredicted RBP10.71□□□□□ -0.69
MATR3-232ENST00000502929 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
MATR3-232ENST00000502929 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.69
MATR3-232ENST00000502929 TRPM1Q7Z4N2 1603 aa10.71□□□□□ -0.69
MATR3-232ENST00000502929 NEO1Q92859 1461 aa10.71□□□□□ -0.69
MATR3-232ENST00000502929 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
MATR3-232ENST00000502929 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
MATR3-232ENST00000502929 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
MATR3-232ENST00000502929 TET3O43151 1660 aa10.71□□□□□ -0.7
MATR3-232ENST00000502929 PPP2R1AP30153 589 aa10.71□□□□□ -0.7
MATR3-232ENST00000502929 NPATQ14207 1427 aa10.71□□□□□ -0.7
MATR3-232ENST00000502929 ERICH6Q7L0X2 663 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
MATR3-232ENST00000502929 CFAP74Q9C0B2 1584 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 RPGRIP1LQ68CZ1 1315 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 SLC12A5Q9H2X9 1139 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 MLH3Q9UHC1 1453 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 CLTCL1P53675 1640 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 YEATS2Q9ULM3 1422 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 EVC2Q86UK5 1308 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 RCAN3Q9UKA8 241 aa10.7□□□□□ -0.7
MATR3-232ENST00000502929 ADAMTS8Q9UP79 889 aa10.69□□□□□ -0.7
MATR3-232ENST00000502929 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
MATR3-232ENST00000502929 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
MATR3-232ENST00000502929 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
MATR3-232ENST00000502929 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
MATR3-232ENST00000502929 SPHKAPQ2M3C7 1700 aa10.69□□□□□ -0.7
MATR3-232ENST00000502929 C14orf93Q9H972 538 aaKnown RBP10.68□□□□□ -0.7
MATR3-232ENST00000502929 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
MATR3-232ENST00000502929 PARD3Q8TEW0 1356 aa10.68□□□□□ -0.7
MATR3-232ENST00000502929 CDCA7LQ96GN5 454 aa10.68□□□□□ -0.7
MATR3-232ENST00000502929 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
MATR3-232ENST00000502929 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
MATR3-232ENST00000502929 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
MATR3-232ENST00000502929 EFCAB6Q5THR3 1501 aa10.67□□□□□ -0.7
MATR3-232ENST00000502929 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
MATR3-232ENST00000502929 POLR1AO95602 1720 aaPredicted RBP10.66□□□□□ -0.7
MATR3-232ENST00000502929 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
MATR3-232ENST00000502929 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
MATR3-232ENST00000502929 PRAM1Q96QH2 718 aa10.65□□□□□ -0.7
MATR3-232ENST00000502929 TSPOAP1O95153 1857 aa10.65□□□□□ -0.7
MATR3-232ENST00000502929 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.71
MATR3-232ENST00000502929 CGNL1Q0VF96 1302 aa10.65□□□□□ -0.71
MATR3-232ENST00000502929 CEP152O94986 1710 aa10.64□□□□□ -0.71
MATR3-232ENST00000502929 APAF1O14727 1248 aa10.64□□□□□ -0.71
MATR3-232ENST00000502929 KIF1BO60333 1816 aa10.64□□□□□ -0.71
MATR3-232ENST00000502929 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
MATR3-232ENST00000502929 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
MATR3-232ENST00000502929 NEFMP07197 916 aa10.63□□□□□ -0.71
MATR3-232ENST00000502929 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
MATR3-232ENST00000502929 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.63□□□□□ -0.71
MATR3-232ENST00000502929 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
MATR3-232ENST00000502929 MADDQ8WXG6 1647 aa10.63□□□□□ -0.71
MATR3-232ENST00000502929 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
MATR3-232ENST00000502929 PLIN1O60240 522 aa10.62□□□□□ -0.71
MATR3-232ENST00000502929 U2AF1L5P0DN76 240 aaPredicted RBP10.62□□□□□ -0.71
MATR3-232ENST00000502929 U2AF1Q01081 240 aaKnown RBP eCLIP10.62□□□□□ -0.71
MATR3-232ENST00000502929 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
MATR3-232ENST00000502929 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
MATR3-232ENST00000502929 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
MATR3-232ENST00000502929 ABCC3O15438 1527 aa10.62□□□□□ -0.71
MATR3-232ENST00000502929 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
MATR3-232ENST00000502929 RRP7AQ9Y3A4 280 aaKnown RBP10.61□□□□□ -0.71
MATR3-232ENST00000502929 DEPDC5O75140 1603 aa10.61□□□□□ -0.71
MATR3-232ENST00000502929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.61□□□□□ -0.714e-7■■■□□ 14.8
MATR3-232ENST00000502929 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
MATR3-232ENST00000502929 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
MATR3-232ENST00000502929 MYOM2P54296 1465 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 MTHFSP49914 203 aa10.6□□□□□ -0.71
MATR3-232ENST00000502929 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 VWDEQ8N2E2 1590 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
MATR3-232ENST00000502929 MROH1Q8NDA8 1641 aa10.58□□□□□ -0.72
MATR3-232ENST00000502929 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.72
MATR3-232ENST00000502929 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
MATR3-232ENST00000502929 WAPLQ7Z5K2 1190 aa10.58□□□□□ -0.72
MATR3-232ENST00000502929 LAMC1P11047 1609 aa10.58□□□□□ -0.72
MATR3-232ENST00000502929 LMTK2Q8IWU2 1503 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.57□□□□□ -0.72
MATR3-232ENST00000502929 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 ERVK-7P63135 1459 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 TXNDC2Q86VQ3 553 aa10.57□□□□□ -0.72
MATR3-232ENST00000502929 PPP6R1Q9UPN7 881 aa10.56□□□□□ -0.72
MATR3-232ENST00000502929 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
MATR3-232ENST00000502929 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
MATR3-232ENST00000502929 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
MATR3-232ENST00000502929 NPM2Q86SE8 214 aaKnown RBP10.55□□□□□ -0.72
MATR3-232ENST00000502929 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
MATR3-232ENST00000502929 CEBPAP49715 358 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms