RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
MRPL55-234ENST00000497758 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
MRPL55-234ENST00000497758 BCANQ96GW7 911 aa17.36■□□□□ 0.37
MRPL55-234ENST00000497758 HRCP23327 699 aa17.35■□□□□ 0.37
MRPL55-234ENST00000497758 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
MRPL55-234ENST00000497758 ZFYVE9O95405 1425 aa17.34■□□□□ 0.37
MRPL55-234ENST00000497758 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
MRPL55-234ENST00000497758 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
MRPL55-234ENST00000497758 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
MRPL55-234ENST00000497758 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
MRPL55-234ENST00000497758 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
MRPL55-234ENST00000497758 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
MRPL55-234ENST00000497758 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
MRPL55-234ENST00000497758 KIF1BO60333 1816 aa17.28■□□□□ 0.36
MRPL55-234ENST00000497758 CPS1P31327 1500 aa17.27■□□□□ 0.36
MRPL55-234ENST00000497758 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-234ENST00000497758 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
MRPL55-234ENST00000497758 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
MRPL55-234ENST00000497758 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
MRPL55-234ENST00000497758 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-234ENST00000497758 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
MRPL55-234ENST00000497758 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
MRPL55-234ENST00000497758 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
MRPL55-234ENST00000497758 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
MRPL55-234ENST00000497758 KCNA6P17658 529 aa17.2■□□□□ 0.34
MRPL55-234ENST00000497758 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
MRPL55-234ENST00000497758 ADAMTS13Q76LX8 1427 aa17.19■□□□□ 0.34
MRPL55-234ENST00000497758 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
MRPL55-234ENST00000497758 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
MRPL55-234ENST00000497758 LRRC7Q96NW7 1537 aa17.17■□□□□ 0.34
MRPL55-234ENST00000497758 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
MRPL55-234ENST00000497758 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
MRPL55-234ENST00000497758 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-234ENST00000497758 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
MRPL55-234ENST00000497758 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
MRPL55-234ENST00000497758 PPLO60437 1756 aa17.14■□□□□ 0.33
MRPL55-234ENST00000497758 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
MRPL55-234ENST00000497758 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
MRPL55-234ENST00000497758 TOM1O60784 492 aa17.12■□□□□ 0.33
MRPL55-234ENST00000497758 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
MRPL55-234ENST00000497758 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
MRPL55-234ENST00000497758 METP08581 1390 aa17.11■□□□□ 0.33
MRPL55-234ENST00000497758 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
MRPL55-234ENST00000497758 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
MRPL55-234ENST00000497758 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
MRPL55-234ENST00000497758 RBM33Q96EV2 1170 aaKnown RBP17.09■□□□□ 0.33
MRPL55-234ENST00000497758 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
MRPL55-234ENST00000497758 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
MRPL55-234ENST00000497758 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
MRPL55-234ENST00000497758 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
MRPL55-234ENST00000497758 MYOM2P54296 1465 aa17.06■□□□□ 0.32
MRPL55-234ENST00000497758 PIK3C2GO75747 1445 aa17.05■□□□□ 0.32
MRPL55-234ENST00000497758 MSH6P52701 1360 aa17.05■□□□□ 0.32
MRPL55-234ENST00000497758 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
MRPL55-234ENST00000497758 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
MRPL55-234ENST00000497758 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
MRPL55-234ENST00000497758 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
MRPL55-234ENST00000497758 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
MRPL55-234ENST00000497758 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
MRPL55-234ENST00000497758 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
MRPL55-234ENST00000497758 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
MRPL55-234ENST00000497758 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
MRPL55-234ENST00000497758 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
MRPL55-234ENST00000497758 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
MRPL55-234ENST00000497758 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 ATF3P18847 181 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 STK26Q9P289 416 aa16.99■□□□□ 0.31
MRPL55-234ENST00000497758 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
MRPL55-234ENST00000497758 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
MRPL55-234ENST00000497758 LAMC1P11047 1609 aa16.98■□□□□ 0.31
MRPL55-234ENST00000497758 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
MRPL55-234ENST00000497758 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
MRPL55-234ENST00000497758 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
MRPL55-234ENST00000497758 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
MRPL55-234ENST00000497758 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
MRPL55-234ENST00000497758 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
MRPL55-234ENST00000497758 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
MRPL55-234ENST00000497758 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
MRPL55-234ENST00000497758 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
MRPL55-234ENST00000497758 DCCP43146 1447 aa16.94■□□□□ 0.3
MRPL55-234ENST00000497758 HSPA1LP34931 641 aa16.93■□□□□ 0.3
MRPL55-234ENST00000497758 TECPR2O15040 1411 aa16.93■□□□□ 0.3
MRPL55-234ENST00000497758 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-234ENST00000497758 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
MRPL55-234ENST00000497758 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
MRPL55-234ENST00000497758 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
MRPL55-234ENST00000497758 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
MRPL55-234ENST00000497758 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
MRPL55-234ENST00000497758 SOCS7O14512 581 aa16.88■□□□□ 0.29
MRPL55-234ENST00000497758 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
MRPL55-234ENST00000497758 ADGRB1O14514 1584 aa16.88■□□□□ 0.29
MRPL55-234ENST00000497758 TONSLQ96HA7 1378 aa16.88■□□□□ 0.29
MRPL55-234ENST00000497758 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
MRPL55-234ENST00000497758 POGKQ9P215 609 aa16.87■□□□□ 0.29
MRPL55-234ENST00000497758 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
MRPL55-234ENST00000497758 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
MRPL55-234ENST00000497758 PRAM1Q96QH2 718 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms