RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TMEM132EQ6IEE7 984 aa14.2□□□□□ -0.14
SAMM50-206ENST00000494795 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
SAMM50-206ENST00000494795 PNISRQ8TF01 805 aaKnown RBP14.19□□□□□ -0.14
SAMM50-206ENST00000494795 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
SAMM50-206ENST00000494795 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
SAMM50-206ENST00000494795 NOS1P29475 1434 aa14.18□□□□□ -0.14
SAMM50-206ENST00000494795 SIGLEC1Q9BZZ2 1709 aa14.17□□□□□ -0.14
SAMM50-206ENST00000494795 TMF1P82094 1093 aa14.17□□□□□ -0.14
SAMM50-206ENST00000494795 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
SAMM50-206ENST00000494795 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
SAMM50-206ENST00000494795 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
SAMM50-206ENST00000494795 MAP3K4Q9Y6R4 1608 aa14.16□□□□□ -0.14
SAMM50-206ENST00000494795 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
SAMM50-206ENST00000494795 NEO1Q92859 1461 aa14.15□□□□□ -0.14
SAMM50-206ENST00000494795 ABCC3O15438 1527 aa14.15□□□□□ -0.14
SAMM50-206ENST00000494795 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
SAMM50-206ENST00000494795 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
SAMM50-206ENST00000494795 MLECQ14165 292 aa14.13□□□□□ -0.15
SAMM50-206ENST00000494795 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
SAMM50-206ENST00000494795 LAMC1P11047 1609 aa14.13□□□□□ -0.15
SAMM50-206ENST00000494795 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
SAMM50-206ENST00000494795 IDI1Q13907 227 aa14.13□□□□□ -0.15
SAMM50-206ENST00000494795 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
SAMM50-206ENST00000494795 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
SAMM50-206ENST00000494795 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
SAMM50-206ENST00000494795 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
SAMM50-206ENST00000494795 KIF1BO60333 1816 aa14.11□□□□□ -0.15
SAMM50-206ENST00000494795 PRKCSHP14314 528 aaPredicted RBP14.11□□□□□ -0.15
SAMM50-206ENST00000494795 NPM3O75607 178 aaKnown RBP14.11□□□□□ -0.15
SAMM50-206ENST00000494795 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
SAMM50-206ENST00000494795 DIP2BQ9P265 1576 aa14.1□□□□□ -0.15
SAMM50-206ENST00000494795 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
SAMM50-206ENST00000494795 SYNMO15061 1565 aa14.09□□□□□ -0.15
SAMM50-206ENST00000494795 NEFLP07196 543 aa14.09□□□□□ -0.15
SAMM50-206ENST00000494795 ADGRB3O60242 1522 aa14.09□□□□□ -0.15
SAMM50-206ENST00000494795 RALBP1Q15311 655 aa14.09□□□□□ -0.15
SAMM50-206ENST00000494795 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.16
SAMM50-206ENST00000494795 IFT172Q9UG01 1749 aa14.08□□□□□ -0.16
SAMM50-206ENST00000494795 CARD14Q9BXL6 1004 aa14.07□□□□□ -0.16
SAMM50-206ENST00000494795 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
SAMM50-206ENST00000494795 MYOM2P54296 1465 aa14.06□□□□□ -0.16
SAMM50-206ENST00000494795 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
SAMM50-206ENST00000494795 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
SAMM50-206ENST00000494795 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
SAMM50-206ENST00000494795 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
SAMM50-206ENST00000494795 STK26Q9P289 416 aa14.05□□□□□ -0.16
SAMM50-206ENST00000494795 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
SAMM50-206ENST00000494795 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
SAMM50-206ENST00000494795 C14orf93Q9H972 538 aaKnown RBP14.05□□□□□ -0.16
SAMM50-206ENST00000494795 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
SAMM50-206ENST00000494795 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
SAMM50-206ENST00000494795 MYOM1P52179 1685 aa14.04□□□□□ -0.16
SAMM50-206ENST00000494795 GLI2P10070 1586 aa14.04□□□□□ -0.16
SAMM50-206ENST00000494795 SLC12A5Q9H2X9 1139 aa14.03□□□□□ -0.16
SAMM50-206ENST00000494795 PPLO60437 1756 aa14.03□□□□□ -0.16
SAMM50-206ENST00000494795 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
SAMM50-206ENST00000494795 PPP2R1AP30153 589 aa14.02□□□□□ -0.17
SAMM50-206ENST00000494795 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
SAMM50-206ENST00000494795 ADGRB1O14514 1584 aa14.01□□□□□ -0.17
SAMM50-206ENST00000494795 CENPJQ9HC77 1338 aaPredicted RBP14.01□□□□□ -0.17
SAMM50-206ENST00000494795 TNNT2P45379 298 aaPredicted RBP14.01□□□□□ -0.17
SAMM50-206ENST00000494795 STAC3Q96MF2 364 aa14□□□□□ -0.17
SAMM50-206ENST00000494795 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
SAMM50-206ENST00000494795 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
SAMM50-206ENST00000494795 NEURL4Q96JN8 1562 aa13.99□□□□□ -0.17
SAMM50-206ENST00000494795 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
SAMM50-206ENST00000494795 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
SAMM50-206ENST00000494795 KIAA1210Q9ULL0 1709 aa13.99□□□□□ -0.17
SAMM50-206ENST00000494795 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
SAMM50-206ENST00000494795 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
SAMM50-206ENST00000494795 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
SAMM50-206ENST00000494795 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
SAMM50-206ENST00000494795 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
SAMM50-206ENST00000494795 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
SAMM50-206ENST00000494795 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-206ENST00000494795 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
SAMM50-206ENST00000494795 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
SAMM50-206ENST00000494795 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
SAMM50-206ENST00000494795 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
SAMM50-206ENST00000494795 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
SAMM50-206ENST00000494795 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
SAMM50-206ENST00000494795 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
SAMM50-206ENST00000494795 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
SAMM50-206ENST00000494795 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
SAMM50-206ENST00000494795 SLC52A1Q9NWF4 448 aa13.93□□□□□ -0.18
SAMM50-206ENST00000494795 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
SAMM50-206ENST00000494795 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
SAMM50-206ENST00000494795 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
SAMM50-206ENST00000494795 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
SAMM50-206ENST00000494795 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
SAMM50-206ENST00000494795 PLIN1O60240 522 aa13.91□□□□□ -0.18
SAMM50-206ENST00000494795 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
SAMM50-206ENST00000494795 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
SAMM50-206ENST00000494795 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.18
SAMM50-206ENST00000494795 CEBPAP49715 358 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-206ENST00000494795 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
SAMM50-206ENST00000494795 ZC3H13Q5T200 1668 aaKnown RBP13.89□□□□□ -0.19
SAMM50-206ENST00000494795 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
SAMM50-206ENST00000494795 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-206ENST00000494795 ARHGEF28Q8N1W1 1705 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms