RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 KANK1Q14678 1352 aa12.8□□□□□ -0.36
GPATCH4-207ENST00000494414 MED14O60244 1454 aa12.79□□□□□ -0.36
GPATCH4-207ENST00000494414 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
GPATCH4-207ENST00000494414 HSPA2P54652 639 aa12.77□□□□□ -0.37
GPATCH4-207ENST00000494414 FBXO31Q5XUX0 539 aaPredicted RBP12.77□□□□□ -0.37
GPATCH4-207ENST00000494414 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.37
GPATCH4-207ENST00000494414 LTBP4Q8N2S1 1624 aa12.77□□□□□ -0.37
GPATCH4-207ENST00000494414 IQGAP1P46940 1657 aa12.77□□□□□ -0.37
GPATCH4-207ENST00000494414 TRPM2O94759 1503 aa12.76□□□□□ -0.37
GPATCH4-207ENST00000494414 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
GPATCH4-207ENST00000494414 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
GPATCH4-207ENST00000494414 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
GPATCH4-207ENST00000494414 IQSEC2Q5JU85 1478 aa12.71□□□□□ -0.38
GPATCH4-207ENST00000494414 ZFYVE9O95405 1425 aa12.71□□□□□ -0.38
GPATCH4-207ENST00000494414 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
GPATCH4-207ENST00000494414 SCAF11Q99590 1463 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-207ENST00000494414 NUP155O75694 1391 aa12.69□□□□□ -0.38
GPATCH4-207ENST00000494414 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
GPATCH4-207ENST00000494414 KIF1BO60333 1816 aa12.68□□□□□ -0.38
GPATCH4-207ENST00000494414 PKD2Q13563 968 aa12.68□□□□□ -0.38
GPATCH4-207ENST00000494414 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
GPATCH4-207ENST00000494414 NRXN3Q9Y4C0 1643 aa12.67□□□□□ -0.38
GPATCH4-207ENST00000494414 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
GPATCH4-207ENST00000494414 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
GPATCH4-207ENST00000494414 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
GPATCH4-207ENST00000494414 ITGAEP38570 1179 aa12.66□□□□□ -0.38
GPATCH4-207ENST00000494414 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-207ENST00000494414 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-207ENST00000494414 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
GPATCH4-207ENST00000494414 NEXMIFQ5QGS0 1516 aa12.65□□□□□ -0.38
GPATCH4-207ENST00000494414 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
GPATCH4-207ENST00000494414 PPLO60437 1756 aa12.64□□□□□ -0.39
GPATCH4-207ENST00000494414 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
GPATCH4-207ENST00000494414 CPS1P31327 1500 aa12.63□□□□□ -0.39
GPATCH4-207ENST00000494414 IDI1Q13907 227 aa12.63□□□□□ -0.39
GPATCH4-207ENST00000494414 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
GPATCH4-207ENST00000494414 SETBP1Q9Y6X0 1596 aa12.63□□□□□ -0.39
GPATCH4-207ENST00000494414 CHD2O14647 1828 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-207ENST00000494414 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
GPATCH4-207ENST00000494414 ACIN1Q9UKV3 1341 aaKnown RBP12.61□□□□□ -0.39
GPATCH4-207ENST00000494414 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
GPATCH4-207ENST00000494414 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
GPATCH4-207ENST00000494414 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
GPATCH4-207ENST00000494414 PLEKHG1Q9ULL1 1385 aa12.58□□□□□ -0.4
GPATCH4-207ENST00000494414 LTKP29376 864 aa12.58□□□□□ -0.4
GPATCH4-207ENST00000494414 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-207ENST00000494414 RIMS2Q9UQ26 1411 aa12.58□□□□□ -0.4
GPATCH4-207ENST00000494414 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
GPATCH4-207ENST00000494414 ANKLE2Q86XL3 938 aa12.57□□□□□ -0.4
GPATCH4-207ENST00000494414 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
GPATCH4-207ENST00000494414 PRAG1Q86YV5 1406 aa12.56□□□□□ -0.4
GPATCH4-207ENST00000494414 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
GPATCH4-207ENST00000494414 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
GPATCH4-207ENST00000494414 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
GPATCH4-207ENST00000494414 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
GPATCH4-207ENST00000494414 NRXN1Q9ULB1 1477 aa12.52□□□□□ -0.41
GPATCH4-207ENST00000494414 KNDC1Q76NI1 1749 aa12.51□□□□□ -0.41
GPATCH4-207ENST00000494414 LAMC1P11047 1609 aa12.51□□□□□ -0.41
GPATCH4-207ENST00000494414 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
GPATCH4-207ENST00000494414 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
GPATCH4-207ENST00000494414 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
GPATCH4-207ENST00000494414 MYOM2P54296 1465 aa12.5□□□□□ -0.41
GPATCH4-207ENST00000494414 ASXL1Q8IXJ9 1541 aa12.49□□□□□ -0.41
GPATCH4-207ENST00000494414 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
GPATCH4-207ENST00000494414 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
GPATCH4-207ENST00000494414 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
GPATCH4-207ENST00000494414 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
GPATCH4-207ENST00000494414 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.41
GPATCH4-207ENST00000494414 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
GPATCH4-207ENST00000494414 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
GPATCH4-207ENST00000494414 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
GPATCH4-207ENST00000494414 PIK3C2GO75747 1445 aa12.45□□□□□ -0.42
GPATCH4-207ENST00000494414 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
GPATCH4-207ENST00000494414 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
GPATCH4-207ENST00000494414 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
GPATCH4-207ENST00000494414 TBX22Q9Y458 520 aa12.44□□□□□ -0.42
GPATCH4-207ENST00000494414 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-207ENST00000494414 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
GPATCH4-207ENST00000494414 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
GPATCH4-207ENST00000494414 KIAA1210Q9ULL0 1709 aa12.42□□□□□ -0.42
GPATCH4-207ENST00000494414 TECPR2O15040 1411 aa12.42□□□□□ -0.42
GPATCH4-207ENST00000494414 KCNA6P17658 529 aa12.41□□□□□ -0.42
GPATCH4-207ENST00000494414 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
GPATCH4-207ENST00000494414 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
GPATCH4-207ENST00000494414 FKBP8Q14318 412 aa12.4□□□□□ -0.42
GPATCH4-207ENST00000494414 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
GPATCH4-207ENST00000494414 METP08581 1390 aa12.39□□□□□ -0.43
GPATCH4-207ENST00000494414 DCCP43146 1447 aa12.38□□□□□ -0.43
GPATCH4-207ENST00000494414 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
GPATCH4-207ENST00000494414 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
GPATCH4-207ENST00000494414 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
GPATCH4-207ENST00000494414 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
GPATCH4-207ENST00000494414 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 DLC1Q96QB1 1528 aa12.36□□□□□ -0.43
GPATCH4-207ENST00000494414 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms