RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
PTK7-218ENST00000493339 GRPEL1Q9HAV7 217 aa16.8■□□□□ 0.28
PTK7-218ENST00000493339 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
PTK7-218ENST00000493339 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
PTK7-218ENST00000493339 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
PTK7-218ENST00000493339 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
PTK7-218ENST00000493339 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
PTK7-218ENST00000493339 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
PTK7-218ENST00000493339 NUP153P49790 1475 aaKnown RBP16.77■□□□□ 0.28
PTK7-218ENST00000493339 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
PTK7-218ENST00000493339 TRMT2AQ8IZ69 625 aaKnown RBP16.76■□□□□ 0.27
PTK7-218ENST00000493339 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
PTK7-218ENST00000493339 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
PTK7-218ENST00000493339 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
PTK7-218ENST00000493339 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
PTK7-218ENST00000493339 CENPJQ9HC77 1338 aaPredicted RBP16.75■□□□□ 0.27
PTK7-218ENST00000493339 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
PTK7-218ENST00000493339 E9PSI1 815 aa16.74■□□□□ 0.27
PTK7-218ENST00000493339 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
PTK7-218ENST00000493339 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
PTK7-218ENST00000493339 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
PTK7-218ENST00000493339 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
PTK7-218ENST00000493339 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
PTK7-218ENST00000493339 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
PTK7-218ENST00000493339 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
PTK7-218ENST00000493339 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
PTK7-218ENST00000493339 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
PTK7-218ENST00000493339 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
PTK7-218ENST00000493339 TNNQ9UQP3 1299 aa16.72■□□□□ 0.27
PTK7-218ENST00000493339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.279e-6■□□□□ 10.7
PTK7-218ENST00000493339 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
PTK7-218ENST00000493339 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
PTK7-218ENST00000493339 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
PTK7-218ENST00000493339 PDS5BQ9NTI5 1447 aa16.71■□□□□ 0.27
PTK7-218ENST00000493339 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.26
PTK7-218ENST00000493339 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
PTK7-218ENST00000493339 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
PTK7-218ENST00000493339 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
PTK7-218ENST00000493339 GAS2L3Q86XJ1 694 aa16.69■□□□□ 0.26
PTK7-218ENST00000493339 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
PTK7-218ENST00000493339 DDX11L8A8MPP1 907 aa16.69■□□□□ 0.26
PTK7-218ENST00000493339 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTK7-218ENST00000493339 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
PTK7-218ENST00000493339 RLBP1P12271 317 aa16.68■□□□□ 0.26
PTK7-218ENST00000493339 TPM2P07951 284 aa16.67■□□□□ 0.26
PTK7-218ENST00000493339 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
PTK7-218ENST00000493339 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
PTK7-218ENST00000493339 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
PTK7-218ENST00000493339 A2MP01023 1474 aa16.65■□□□□ 0.26
PTK7-218ENST00000493339 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
PTK7-218ENST00000493339 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
PTK7-218ENST00000493339 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
PTK7-218ENST00000493339 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
PTK7-218ENST00000493339 PRDM15P57071 1507 aaPredicted RBP16.63■□□□□ 0.25
PTK7-218ENST00000493339 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
PTK7-218ENST00000493339 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
PTK7-218ENST00000493339 WWC1Q8IX03 1113 aa16.62■□□□□ 0.25
PTK7-218ENST00000493339 TNPO1Q92973 898 aaKnown RBP16.62■□□□□ 0.25
PTK7-218ENST00000493339 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
PTK7-218ENST00000493339 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
PTK7-218ENST00000493339 RARSP54136 660 aaKnown RBP16.62■□□□□ 0.25
PTK7-218ENST00000493339 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
PTK7-218ENST00000493339 ISY1Q9ULR0 285 aaKnown RBP16.62■□□□□ 0.25
PTK7-218ENST00000493339 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
PTK7-218ENST00000493339 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
PTK7-218ENST00000493339 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
PTK7-218ENST00000493339 PTPRGP23470 1445 aa16.61■□□□□ 0.25
PTK7-218ENST00000493339 NINLQ9Y2I6 1382 aa16.61■□□□□ 0.25
PTK7-218ENST00000493339 ARID3AQ99856 593 aa16.6■□□□□ 0.25
PTK7-218ENST00000493339 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
PTK7-218ENST00000493339 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
PTK7-218ENST00000493339 PIK3C2GO75747 1445 aa16.6■□□□□ 0.25
PTK7-218ENST00000493339 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
PTK7-218ENST00000493339 KIAA0556O60303 1618 aa16.58■□□□□ 0.25
PTK7-218ENST00000493339 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
PTK7-218ENST00000493339 GBP4Q96PP9 640 aa16.58■□□□□ 0.24
PTK7-218ENST00000493339 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
PTK7-218ENST00000493339 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
PTK7-218ENST00000493339 PLA2R1Q13018 1463 aa16.57■□□□□ 0.24
PTK7-218ENST00000493339 ZBTB22O15209 634 aa16.57■□□□□ 0.24
PTK7-218ENST00000493339 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
PTK7-218ENST00000493339 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
PTK7-218ENST00000493339 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
PTK7-218ENST00000493339 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
PTK7-218ENST00000493339 ZSCAN30Q86W11 494 aa16.56■□□□□ 0.24
PTK7-218ENST00000493339 ANP32BQ92688 251 aaKnown RBP16.56■□□□□ 0.24
PTK7-218ENST00000493339 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
PTK7-218ENST00000493339 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
PTK7-218ENST00000493339 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
PTK7-218ENST00000493339 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
PTK7-218ENST00000493339 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
PTK7-218ENST00000493339 RIPK4P57078 832 aa16.54■□□□□ 0.24
PTK7-218ENST00000493339 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
PTK7-218ENST00000493339 R3HCC1Q9Y3T6 440 aaKnown RBP16.54■□□□□ 0.24
PTK7-218ENST00000493339 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
PTK7-218ENST00000493339 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
PTK7-218ENST00000493339 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
PTK7-218ENST00000493339 OFD1O75665 1012 aa16.53■□□□□ 0.24
PTK7-218ENST00000493339 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
PTK7-218ENST00000493339 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms