RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
PDLIM1-204ENST00000492511 UBAP1LF5GYI3 381 aa10.73□□□□□ -0.69
PDLIM1-204ENST00000492511 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-204ENST00000492511 SLC26A8Q96RN1 970 aa10.73□□□□□ -0.69
PDLIM1-204ENST00000492511 SENP3Q9H4L4 574 aaPredicted RBP10.72□□□□□ -0.69
PDLIM1-204ENST00000492511 TRPM2O94759 1503 aa10.72□□□□□ -0.69
PDLIM1-204ENST00000492511 HRCP23327 699 aa10.71□□□□□ -0.69
PDLIM1-204ENST00000492511 CLTCL1P53675 1640 aa10.71□□□□□ -0.69
PDLIM1-204ENST00000492511 SPHKAPQ2M3C7 1700 aa10.71□□□□□ -0.69
PDLIM1-204ENST00000492511 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDLIM1-204ENST00000492511 PLEKHG1Q9ULL1 1385 aa10.71□□□□□ -0.69
PDLIM1-204ENST00000492511 HDGFP51858 240 aaKnown RBP10.7□□□□□ -0.7
PDLIM1-204ENST00000492511 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
PDLIM1-204ENST00000492511 MYO5BQ9ULV0 1848 aa10.69□□□□□ -0.7
PDLIM1-204ENST00000492511 CPS1P31327 1500 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 ADAMTS13Q76LX8 1427 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 STRCP1A6NGW2 1772 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 KCNA6P17658 529 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
PDLIM1-204ENST00000492511 BCANQ96GW7 911 aa10.67□□□□□ -0.7
PDLIM1-204ENST00000492511 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
PDLIM1-204ENST00000492511 TOM1O60784 492 aa10.66□□□□□ -0.7
PDLIM1-204ENST00000492511 NEXMIFQ5QGS0 1516 aa10.65□□□□□ -0.7
PDLIM1-204ENST00000492511 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
PDLIM1-204ENST00000492511 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
PDLIM1-204ENST00000492511 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
PDLIM1-204ENST00000492511 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
PDLIM1-204ENST00000492511 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
PDLIM1-204ENST00000492511 RGL3Q3MIN7 710 aa10.63□□□□□ -0.71
PDLIM1-204ENST00000492511 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
PDLIM1-204ENST00000492511 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 METP08581 1390 aa10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 NRXN3Q9Y4C0 1643 aa10.62□□□□□ -0.71
PDLIM1-204ENST00000492511 NWD1Q149M9 1564 aa10.61□□□□□ -0.71
PDLIM1-204ENST00000492511 SETBP1Q9Y6X0 1596 aa10.61□□□□□ -0.71
PDLIM1-204ENST00000492511 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
PDLIM1-204ENST00000492511 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
PDLIM1-204ENST00000492511 PIK3R4Q99570 1358 aa10.61□□□□□ -0.71
PDLIM1-204ENST00000492511 ADGRF5Q8IZF2 1346 aa10.6□□□□□ -0.71
PDLIM1-204ENST00000492511 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1-204ENST00000492511 KIF1BO60333 1816 aa10.6□□□□□ -0.71
PDLIM1-204ENST00000492511 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
PDLIM1-204ENST00000492511 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
PDLIM1-204ENST00000492511 HSPA1LP34931 641 aa10.58□□□□□ -0.72
PDLIM1-204ENST00000492511 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
PDLIM1-204ENST00000492511 XIRP1Q702N8 1843 aaKnown RBP10.57□□□□□ -0.72
PDLIM1-204ENST00000492511 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
PDLIM1-204ENST00000492511 PPLO60437 1756 aa10.55□□□□□ -0.72
PDLIM1-204ENST00000492511 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
PDLIM1-204ENST00000492511 DHX57Q6P158 1386 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-204ENST00000492511 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
PDLIM1-204ENST00000492511 NRXN1Q9ULB1 1477 aa10.54□□□□□ -0.72
PDLIM1-204ENST00000492511 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 XRN1Q8IZH2 1706 aaKnown RBP10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 C19orf44Q9H6X5 657 aa10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 C14orf93Q9H972 538 aaKnown RBP10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
PDLIM1-204ENST00000492511 MSH6P52701 1360 aa10.52□□□□□ -0.72
PDLIM1-204ENST00000492511 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.72
PDLIM1-204ENST00000492511 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
PDLIM1-204ENST00000492511 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
PDLIM1-204ENST00000492511 FAM135BQ49AJ0 1406 aa10.51□□□□□ -0.73
PDLIM1-204ENST00000492511 PRAG1Q86YV5 1406 aa10.51□□□□□ -0.73
PDLIM1-204ENST00000492511 MYOM2P54296 1465 aa10.51□□□□□ -0.73
PDLIM1-204ENST00000492511 DCAF11Q8TEB1 546 aa10.51□□□□□ -0.73
PDLIM1-204ENST00000492511 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
PDLIM1-204ENST00000492511 ASXL1Q8IXJ9 1541 aa10.5□□□□□ -0.73
PDLIM1-204ENST00000492511 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
PDLIM1-204ENST00000492511 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
PDLIM1-204ENST00000492511 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
PDLIM1-204ENST00000492511 WAPLQ7Z5K2 1190 aa10.49□□□□□ -0.73
PDLIM1-204ENST00000492511 STK26Q9P289 416 aa10.49□□□□□ -0.73
PDLIM1-204ENST00000492511 LRPPRCP42704 1394 aaKnown RBP10.49□□□□□ -0.73
PDLIM1-204ENST00000492511 ABCC11Q96J66 1382 aa10.49□□□□□ -0.73
PDLIM1-204ENST00000492511 ATF3P18847 181 aa10.48□□□□□ -0.73
PDLIM1-204ENST00000492511 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
PDLIM1-204ENST00000492511 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
PDLIM1-204ENST00000492511 TECPR2O15040 1411 aa10.48□□□□□ -0.73
PDLIM1-204ENST00000492511 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
PDLIM1-204ENST00000492511 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
PDLIM1-204ENST00000492511 YTHDC2Q9H6S0 1430 aaKnown RBP10.47□□□□□ -0.73
PDLIM1-204ENST00000492511 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
PDLIM1-204ENST00000492511 SIRT1Q96EB6 747 aa10.46□□□□□ -0.73
PDLIM1-204ENST00000492511 DCCP43146 1447 aa10.46□□□□□ -0.74
PDLIM1-204ENST00000492511 MST1RQ04912 1400 aa10.45□□□□□ -0.74
PDLIM1-204ENST00000492511 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
PDLIM1-204ENST00000492511 BRINP3Q76B58 766 aa10.45□□□□□ -0.74
PDLIM1-204ENST00000492511 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
PDLIM1-204ENST00000492511 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
PDLIM1-204ENST00000492511 ADGRB1O14514 1584 aa10.44□□□□□ -0.74
PDLIM1-204ENST00000492511 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
PDLIM1-204ENST00000492511 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms