RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.41
PFDN6-207ENST00000491382 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
PFDN6-207ENST00000491382 KIF1BO60333 1816 aa23.87■■□□□ 1.41
PFDN6-207ENST00000491382 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
PFDN6-207ENST00000491382 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.86■■□□□ 1.41
PFDN6-207ENST00000491382 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
PFDN6-207ENST00000491382 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
PFDN6-207ENST00000491382 BCANQ96GW7 911 aa23.82■■□□□ 1.4
PFDN6-207ENST00000491382 STRCP1A6NGW2 1772 aa23.82■■□□□ 1.4
PFDN6-207ENST00000491382 MPHOSPH9Q99550 1183 aa23.81■■□□□ 1.4
PFDN6-207ENST00000491382 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
PFDN6-207ENST00000491382 SLC26A8Q96RN1 970 aa23.77■■□□□ 1.4
PFDN6-207ENST00000491382 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
PFDN6-207ENST00000491382 FOXD1Q16676 465 aa23.75■■□□□ 1.39
PFDN6-207ENST00000491382 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
PFDN6-207ENST00000491382 CCDC144AA2RUR9 1427 aa23.74■■□□□ 1.39
PFDN6-207ENST00000491382 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
PFDN6-207ENST00000491382 NEXMIFQ5QGS0 1516 aa23.72■■□□□ 1.39
PFDN6-207ENST00000491382 NWD1Q149M9 1564 aa23.72■■□□□ 1.39
PFDN6-207ENST00000491382 HRCP23327 699 aa23.71■■□□□ 1.39
PFDN6-207ENST00000491382 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
PFDN6-207ENST00000491382 UBAP1LF5GYI3 381 aa23.7■■□□□ 1.38
PFDN6-207ENST00000491382 KCNA6P17658 529 aa23.7■■□□□ 1.38
PFDN6-207ENST00000491382 CHD2O14647 1828 aaKnown RBP23.7■■□□□ 1.38
PFDN6-207ENST00000491382 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
PFDN6-207ENST00000491382 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
PFDN6-207ENST00000491382 ADAMTS13Q76LX8 1427 aa23.68■■□□□ 1.38
PFDN6-207ENST00000491382 SETBP1Q9Y6X0 1596 aa23.68■■□□□ 1.38
PFDN6-207ENST00000491382 RPGRIP1LQ68CZ1 1315 aa23.66■■□□□ 1.38
PFDN6-207ENST00000491382 PPLO60437 1756 aa23.66■■□□□ 1.38
PFDN6-207ENST00000491382 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
PFDN6-207ENST00000491382 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
PFDN6-207ENST00000491382 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
PFDN6-207ENST00000491382 TOM1O60784 492 aa23.65■■□□□ 1.38
PFDN6-207ENST00000491382 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
PFDN6-207ENST00000491382 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
PFDN6-207ENST00000491382 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
PFDN6-207ENST00000491382 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
PFDN6-207ENST00000491382 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
PFDN6-207ENST00000491382 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
PFDN6-207ENST00000491382 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
PFDN6-207ENST00000491382 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
PFDN6-207ENST00000491382 ALKQ9UM73 1620 aa23.55■■□□□ 1.36
PFDN6-207ENST00000491382 ANKRD30BQ9BXX2 1392 aa23.54■■□□□ 1.36
PFDN6-207ENST00000491382 XRN1Q8IZH2 1706 aaKnown RBP23.54■■□□□ 1.36
PFDN6-207ENST00000491382 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
PFDN6-207ENST00000491382 AMOTL2Q9Y2J4 779 aa23.52■■□□□ 1.36
PFDN6-207ENST00000491382 MSH6P52701 1360 aa23.52■■□□□ 1.36
PFDN6-207ENST00000491382 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
PFDN6-207ENST00000491382 NCOA3Q9Y6Q9 1424 aa23.51■■□□□ 1.35
PFDN6-207ENST00000491382 METP08581 1390 aa23.51■■□□□ 1.35
PFDN6-207ENST00000491382 RBM33Q96EV2 1170 aaKnown RBP23.5■■□□□ 1.35
PFDN6-207ENST00000491382 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
PFDN6-207ENST00000491382 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
PFDN6-207ENST00000491382 MYOM2P54296 1465 aa23.44■■□□□ 1.34
PFDN6-207ENST00000491382 PIK3C2GO75747 1445 aa23.43■■□□□ 1.34
PFDN6-207ENST00000491382 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.42■■□□□ 1.34
PFDN6-207ENST00000491382 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
PFDN6-207ENST00000491382 LAMC1P11047 1609 aa23.41■■□□□ 1.34
PFDN6-207ENST00000491382 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
PFDN6-207ENST00000491382 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
PFDN6-207ENST00000491382 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
PFDN6-207ENST00000491382 NRXN1Q9ULB1 1477 aa23.39■■□□□ 1.34
PFDN6-207ENST00000491382 HSPA1LP34931 641 aa23.39■■□□□ 1.33
PFDN6-207ENST00000491382 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
PFDN6-207ENST00000491382 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
PFDN6-207ENST00000491382 DCCP43146 1447 aa23.37■■□□□ 1.33
PFDN6-207ENST00000491382 ATF3P18847 181 aa23.37■■□□□ 1.33
PFDN6-207ENST00000491382 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
PFDN6-207ENST00000491382 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
PFDN6-207ENST00000491382 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
PFDN6-207ENST00000491382 NALCNQ8IZF0 1738 aa23.35■■□□□ 1.33
PFDN6-207ENST00000491382 ADGRL3Q9HAR2 1447 aa23.34■■□□□ 1.33
PFDN6-207ENST00000491382 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
PFDN6-207ENST00000491382 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
PFDN6-207ENST00000491382 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.32
PFDN6-207ENST00000491382 DCAF11Q8TEB1 546 aa23.32■■□□□ 1.32
PFDN6-207ENST00000491382 LRPPRCP42704 1394 aaKnown RBP23.31■■□□□ 1.32
PFDN6-207ENST00000491382 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
PFDN6-207ENST00000491382 TECPR2O15040 1411 aa23.3■■□□□ 1.32
PFDN6-207ENST00000491382 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
PFDN6-207ENST00000491382 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
PFDN6-207ENST00000491382 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
PFDN6-207ENST00000491382 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.32
PFDN6-207ENST00000491382 ABCC11Q96J66 1382 aa23.27■■□□□ 1.32
PFDN6-207ENST00000491382 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
PFDN6-207ENST00000491382 STK26Q9P289 416 aa23.27■■□□□ 1.32
PFDN6-207ENST00000491382 PHLPP1O60346 1717 aa23.25■■□□□ 1.31
PFDN6-207ENST00000491382 MST1RQ04912 1400 aa23.24■■□□□ 1.31
PFDN6-207ENST00000491382 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
PFDN6-207ENST00000491382 ADGRB1O14514 1584 aa23.21■■□□□ 1.31
PFDN6-207ENST00000491382 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
PFDN6-207ENST00000491382 SIRT1Q96EB6 747 aa23.19■■□□□ 1.3
PFDN6-207ENST00000491382 KIAA1210Q9ULL0 1709 aa23.19■■□□□ 1.3
PFDN6-207ENST00000491382 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
PFDN6-207ENST00000491382 DISP3Q9P2K9 1392 aa23.18■■□□□ 1.3
PFDN6-207ENST00000491382 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
PFDN6-207ENST00000491382 WAPLQ7Z5K2 1190 aa23.18■■□□□ 1.3
PFDN6-207ENST00000491382 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
PFDN6-207ENST00000491382 MED1Q15648 1581 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms