RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 MADDQ8WXG6 1647 aa11.08□□□□□ -0.64
SCMH1-216ENST00000489421 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
SCMH1-216ENST00000489421 FANCAO15360 1455 aa11.07□□□□□ -0.64
SCMH1-216ENST00000489421 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
SCMH1-216ENST00000489421 ERBB3P21860 1342 aa11.07□□□□□ -0.64
SCMH1-216ENST00000489421 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
SCMH1-216ENST00000489421 FER1L4A9Z1Z3 1794 aa11.05□□□□□ -0.64
SCMH1-216ENST00000489421 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
SCMH1-216ENST00000489421 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
SCMH1-216ENST00000489421 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
SCMH1-216ENST00000489421 SLC34A2O95436 690 aa11.04□□□□□ -0.64
SCMH1-216ENST00000489421 FOXK1P85037 733 aa11.04□□□□□ -0.64
SCMH1-216ENST00000489421 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
SCMH1-216ENST00000489421 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
SCMH1-216ENST00000489421 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
SCMH1-216ENST00000489421 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
SCMH1-216ENST00000489421 TRIM26Q12899 539 aaPredicted RBP11.03□□□□□ -0.64
SCMH1-216ENST00000489421 DSG2Q14126 1118 aa11.03□□□□□ -0.64
SCMH1-216ENST00000489421 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
SCMH1-216ENST00000489421 KDM5CP41229 1560 aa11.03□□□□□ -0.64
SCMH1-216ENST00000489421 ABCA6Q8N139 1617 aa11.02□□□□□ -0.64
SCMH1-216ENST00000489421 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.64
SCMH1-216ENST00000489421 RAPGEF3O95398 923 aa11.02□□□□□ -0.65
SCMH1-216ENST00000489421 KANK4Q5T7N3 995 aaPredicted RBP11.02□□□□□ -0.65
SCMH1-216ENST00000489421 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
SCMH1-216ENST00000489421 KIDINS220Q9ULH0 1771 aa11.02□□□□□ -0.65
SCMH1-216ENST00000489421 PLCH2O75038 1416 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 CCDC18Q5T9S5 1454 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 ABCC1P33527 1531 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 ZFYVE16Q7Z3T8 1539 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 PLPP6Q8IY26 295 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 SAMD9LQ8IVG5 1584 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
SCMH1-216ENST00000489421 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
SCMH1-216ENST00000489421 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
SCMH1-216ENST00000489421 NUDT7P0C024 238 aa11□□□□□ -0.65
SCMH1-216ENST00000489421 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
SCMH1-216ENST00000489421 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
SCMH1-216ENST00000489421 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
SCMH1-216ENST00000489421 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
SCMH1-216ENST00000489421 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
SCMH1-216ENST00000489421 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
SCMH1-216ENST00000489421 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
SCMH1-216ENST00000489421 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
SCMH1-216ENST00000489421 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
SCMH1-216ENST00000489421 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
SCMH1-216ENST00000489421 PTPRMP28827 1452 aa10.95□□□□□ -0.66
SCMH1-216ENST00000489421 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
SCMH1-216ENST00000489421 SCAPERQ9BY12 1400 aa10.95□□□□□ -0.66
SCMH1-216ENST00000489421 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
SCMH1-216ENST00000489421 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
SCMH1-216ENST00000489421 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
SCMH1-216ENST00000489421 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
SCMH1-216ENST00000489421 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
SCMH1-216ENST00000489421 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
SCMH1-216ENST00000489421 C3P01024 1663 aa10.94□□□□□ -0.66
SCMH1-216ENST00000489421 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
SCMH1-216ENST00000489421 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
SCMH1-216ENST00000489421 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
SCMH1-216ENST00000489421 LHX6Q9UPM6 363 aa10.93□□□□□ -0.66
SCMH1-216ENST00000489421 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
SCMH1-216ENST00000489421 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
SCMH1-216ENST00000489421 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
SCMH1-216ENST00000489421 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
SCMH1-216ENST00000489421 ZNF518AQ6AHZ1 1483 aa10.92□□□□□ -0.66
SCMH1-216ENST00000489421 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
SCMH1-216ENST00000489421 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
SCMH1-216ENST00000489421 PDE4AP27815 886 aa10.9□□□□□ -0.66
SCMH1-216ENST00000489421 MMRN1Q13201 1228 aa10.9□□□□□ -0.66
SCMH1-216ENST00000489421 CDK11AQ9UQ88 783 aaPredicted RBP10.9□□□□□ -0.66
SCMH1-216ENST00000489421 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.67
SCMH1-216ENST00000489421 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
SCMH1-216ENST00000489421 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
SCMH1-216ENST00000489421 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
SCMH1-216ENST00000489421 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
SCMH1-216ENST00000489421 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
SCMH1-216ENST00000489421 ATP10AO60312 1499 aa10.87□□□□□ -0.67
SCMH1-216ENST00000489421 MLH3Q9UHC1 1453 aa10.87□□□□□ -0.67
SCMH1-216ENST00000489421 MFSD10Q14728 455 aa10.87□□□□□ -0.67
SCMH1-216ENST00000489421 STRCQ7RTU9 1775 aa10.87□□□□□ -0.67
SCMH1-216ENST00000489421 MROH2AA6NES4 1674 aa10.86□□□□□ -0.67
SCMH1-216ENST00000489421 CLTCQ00610 1675 aaKnown RBP10.86□□□□□ -0.67
SCMH1-216ENST00000489421 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
SCMH1-216ENST00000489421 ATP7AQ04656 1500 aa10.86□□□□□ -0.67
SCMH1-216ENST00000489421 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.672e-7■□□□□ 8.5
SCMH1-216ENST00000489421 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
SCMH1-216ENST00000489421 EFCAB2Q5VUJ9 269 aa10.85□□□□□ -0.67
SCMH1-216ENST00000489421 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
SCMH1-216ENST00000489421 DDX27Q96GQ7 796 aaKnown RBP10.85□□□□□ -0.67
SCMH1-216ENST00000489421 AGLP35573 1532 aa10.84□□□□□ -0.67
SCMH1-216ENST00000489421 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
SCMH1-216ENST00000489421 CROCC2H7BZ55 1655 aa10.84□□□□□ -0.67
SCMH1-216ENST00000489421 NCOA2Q15596 1464 aa10.83□□□□□ -0.68
SCMH1-216ENST00000489421 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.68
SCMH1-216ENST00000489421 TBC1D12O60347 775 aa10.82□□□□□ -0.68
SCMH1-216ENST00000489421 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
SCMH1-216ENST00000489421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCMH1-216ENST00000489421 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms