RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 IDI1Q13907 227 aa17.17■□□□□ 0.34
CEACAM1-212ENST00000488639 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
CEACAM1-212ENST00000488639 SLIT1O75093 1534 aa17.14■□□□□ 0.33
CEACAM1-212ENST00000488639 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
CEACAM1-212ENST00000488639 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
CEACAM1-212ENST00000488639 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
CEACAM1-212ENST00000488639 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
CEACAM1-212ENST00000488639 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
CEACAM1-212ENST00000488639 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
CEACAM1-212ENST00000488639 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
CEACAM1-212ENST00000488639 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
CEACAM1-212ENST00000488639 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
CEACAM1-212ENST00000488639 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
CEACAM1-212ENST00000488639 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.06■□□□□ 0.32
CEACAM1-212ENST00000488639 ZFYVE9O95405 1425 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 MED14O60244 1454 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 PPLO60437 1756 aa17.05■□□□□ 0.32
CEACAM1-212ENST00000488639 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
CEACAM1-212ENST00000488639 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
CEACAM1-212ENST00000488639 NEXMIFQ5QGS0 1516 aa17.04■□□□□ 0.32
CEACAM1-212ENST00000488639 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
CEACAM1-212ENST00000488639 HSPA2P54652 639 aa17.02■□□□□ 0.32
CEACAM1-212ENST00000488639 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.32
CEACAM1-212ENST00000488639 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
CEACAM1-212ENST00000488639 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
CEACAM1-212ENST00000488639 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
CEACAM1-212ENST00000488639 MYOM2P54296 1465 aa16.99■□□□□ 0.31
CEACAM1-212ENST00000488639 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
CEACAM1-212ENST00000488639 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
CEACAM1-212ENST00000488639 LTKP29376 864 aa16.97■□□□□ 0.31
CEACAM1-212ENST00000488639 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
CEACAM1-212ENST00000488639 DIP2AQ14689 1571 aa16.97■□□□□ 0.31
CEACAM1-212ENST00000488639 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
CEACAM1-212ENST00000488639 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
CEACAM1-212ENST00000488639 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
CEACAM1-212ENST00000488639 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
CEACAM1-212ENST00000488639 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
CEACAM1-212ENST00000488639 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
CEACAM1-212ENST00000488639 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
CEACAM1-212ENST00000488639 LAMC1P11047 1609 aa16.92■□□□□ 0.3
CEACAM1-212ENST00000488639 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
CEACAM1-212ENST00000488639 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
CEACAM1-212ENST00000488639 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
CEACAM1-212ENST00000488639 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
CEACAM1-212ENST00000488639 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
CEACAM1-212ENST00000488639 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
CEACAM1-212ENST00000488639 PIK3R4Q99570 1358 aa16.89■□□□□ 0.29
CEACAM1-212ENST00000488639 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
CEACAM1-212ENST00000488639 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
CEACAM1-212ENST00000488639 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
CEACAM1-212ENST00000488639 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
CEACAM1-212ENST00000488639 ALKQ9UM73 1620 aa16.86■□□□□ 0.29
CEACAM1-212ENST00000488639 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
CEACAM1-212ENST00000488639 BCANQ96GW7 911 aa16.86■□□□□ 0.29
CEACAM1-212ENST00000488639 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
CEACAM1-212ENST00000488639 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
CEACAM1-212ENST00000488639 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
CEACAM1-212ENST00000488639 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
CEACAM1-212ENST00000488639 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
CEACAM1-212ENST00000488639 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
CEACAM1-212ENST00000488639 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
CEACAM1-212ENST00000488639 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
CEACAM1-212ENST00000488639 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
CEACAM1-212ENST00000488639 CPS1P31327 1500 aa16.8■□□□□ 0.28
CEACAM1-212ENST00000488639 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-212ENST00000488639 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
CEACAM1-212ENST00000488639 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-212ENST00000488639 KCNA6P17658 529 aa16.78■□□□□ 0.28
CEACAM1-212ENST00000488639 KNDC1Q76NI1 1749 aa16.78■□□□□ 0.28
CEACAM1-212ENST00000488639 ADGRB1O14514 1584 aa16.77■□□□□ 0.27
CEACAM1-212ENST00000488639 STRCP1A6NGW2 1772 aa16.76■□□□□ 0.27
CEACAM1-212ENST00000488639 METP08581 1390 aa16.76■□□□□ 0.27
CEACAM1-212ENST00000488639 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
CEACAM1-212ENST00000488639 TECPR2O15040 1411 aa16.75■□□□□ 0.27
CEACAM1-212ENST00000488639 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
CEACAM1-212ENST00000488639 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
CEACAM1-212ENST00000488639 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
CEACAM1-212ENST00000488639 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
CEACAM1-212ENST00000488639 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
CEACAM1-212ENST00000488639 ZNF335Q9H4Z2 1342 aaPredicted RBP16.73■□□□□ 0.27
CEACAM1-212ENST00000488639 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
CEACAM1-212ENST00000488639 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
CEACAM1-212ENST00000488639 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
CEACAM1-212ENST00000488639 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
CEACAM1-212ENST00000488639 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
CEACAM1-212ENST00000488639 DLC1Q96QB1 1528 aa16.72■□□□□ 0.27
CEACAM1-212ENST00000488639 SIRT1Q96EB6 747 aa16.71■□□□□ 0.27
CEACAM1-212ENST00000488639 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
CEACAM1-212ENST00000488639 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
CEACAM1-212ENST00000488639 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
CEACAM1-212ENST00000488639 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
CEACAM1-212ENST00000488639 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
CEACAM1-212ENST00000488639 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
CEACAM1-212ENST00000488639 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
CEACAM1-212ENST00000488639 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms