RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
CEACAM1-212ENST00000488639 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
CEACAM1-212ENST00000488639 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
CEACAM1-212ENST00000488639 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
CEACAM1-212ENST00000488639 ABCC9O60706 1549 aa23.82■■□□□ 1.4
CEACAM1-212ENST00000488639 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
CEACAM1-212ENST00000488639 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
CEACAM1-212ENST00000488639 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
CEACAM1-212ENST00000488639 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
CEACAM1-212ENST00000488639 NACADO15069 1562 aa23.26■■□□□ 1.31
CEACAM1-212ENST00000488639 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
CEACAM1-212ENST00000488639 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
CEACAM1-212ENST00000488639 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
CEACAM1-212ENST00000488639 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
CEACAM1-212ENST00000488639 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
CEACAM1-212ENST00000488639 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
CEACAM1-212ENST00000488639 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
CEACAM1-212ENST00000488639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
CEACAM1-212ENST00000488639 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
CEACAM1-212ENST00000488639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
CEACAM1-212ENST00000488639 FOXD1Q16676 465 aa21.69■■□□□ 1.06
CEACAM1-212ENST00000488639 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
CEACAM1-212ENST00000488639 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
CEACAM1-212ENST00000488639 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
CEACAM1-212ENST00000488639 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
CEACAM1-212ENST00000488639 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
CEACAM1-212ENST00000488639 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
CEACAM1-212ENST00000488639 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CEACAM1-212ENST00000488639 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
CEACAM1-212ENST00000488639 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
CEACAM1-212ENST00000488639 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
CEACAM1-212ENST00000488639 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
CEACAM1-212ENST00000488639 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
CEACAM1-212ENST00000488639 WIZO95785 1651 aa21.3■■□□□ 1
CEACAM1-212ENST00000488639 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
CEACAM1-212ENST00000488639 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
CEACAM1-212ENST00000488639 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
CEACAM1-212ENST00000488639 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CEACAM1-212ENST00000488639 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
CEACAM1-212ENST00000488639 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
CEACAM1-212ENST00000488639 CFTRP13569 1480 aa20.74■□□□□ 0.91
CEACAM1-212ENST00000488639 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
CEACAM1-212ENST00000488639 NESP48681 1621 aa20.69■□□□□ 0.9
CEACAM1-212ENST00000488639 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
CEACAM1-212ENST00000488639 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
CEACAM1-212ENST00000488639 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
CEACAM1-212ENST00000488639 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
CEACAM1-212ENST00000488639 ADRA2BP18089 450 aa20.51■□□□□ 0.87
CEACAM1-212ENST00000488639 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
CEACAM1-212ENST00000488639 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
CEACAM1-212ENST00000488639 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
CEACAM1-212ENST00000488639 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
CEACAM1-212ENST00000488639 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
CEACAM1-212ENST00000488639 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
CEACAM1-212ENST00000488639 WDR62O43379 1518 aa20.35■□□□□ 0.85
CEACAM1-212ENST00000488639 CUX2O14529 1486 aa20.33■□□□□ 0.85
CEACAM1-212ENST00000488639 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
CEACAM1-212ENST00000488639 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
CEACAM1-212ENST00000488639 MSH5O43196 834 aa20.27■□□□□ 0.84
CEACAM1-212ENST00000488639 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
CEACAM1-212ENST00000488639 CUX1P39880 1505 aa20.17■□□□□ 0.82
CEACAM1-212ENST00000488639 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
CEACAM1-212ENST00000488639 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CEACAM1-212ENST00000488639 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
CEACAM1-212ENST00000488639 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
CEACAM1-212ENST00000488639 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
CEACAM1-212ENST00000488639 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
CEACAM1-212ENST00000488639 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
CEACAM1-212ENST00000488639 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
CEACAM1-212ENST00000488639 WDR97A6NE52 1622 aa20■□□□□ 0.79
CEACAM1-212ENST00000488639 SOGA1O94964 1423 aa19.99■□□□□ 0.79
CEACAM1-212ENST00000488639 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
CEACAM1-212ENST00000488639 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
CEACAM1-212ENST00000488639 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
CEACAM1-212ENST00000488639 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
CEACAM1-212ENST00000488639 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
CEACAM1-212ENST00000488639 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
CEACAM1-212ENST00000488639 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
CEACAM1-212ENST00000488639 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
CEACAM1-212ENST00000488639 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.762e-7■□□□□ 9.8
CEACAM1-212ENST00000488639 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
CEACAM1-212ENST00000488639 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
CEACAM1-212ENST00000488639 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CEACAM1-212ENST00000488639 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
CEACAM1-212ENST00000488639 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
CEACAM1-212ENST00000488639 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
CEACAM1-212ENST00000488639 CUL7Q14999 1698 aa19.63■□□□□ 0.73
CEACAM1-212ENST00000488639 EEA1Q15075 1411 aa19.63■□□□□ 0.73
CEACAM1-212ENST00000488639 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
CEACAM1-212ENST00000488639 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
CEACAM1-212ENST00000488639 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
CEACAM1-212ENST00000488639 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
CEACAM1-212ENST00000488639 IGF1RP08069 1367 aa19.58■□□□□ 0.73
CEACAM1-212ENST00000488639 CHD1O14646 1710 aa19.56■□□□□ 0.72
CEACAM1-212ENST00000488639 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
CEACAM1-212ENST00000488639 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
CEACAM1-212ENST00000488639 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
CEACAM1-212ENST00000488639 CARMIL1Q5VZK9 1371 aa19.48■□□□□ 0.71
CEACAM1-212ENST00000488639 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
CEACAM1-212ENST00000488639 FBLN2P98095 1184 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms