RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.81■■□□□ 1.4
CTDSP1-209ENST00000488627 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
CTDSP1-209ENST00000488627 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
CTDSP1-209ENST00000488627 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
CTDSP1-209ENST00000488627 TRPM2O94759 1503 aa23.79■■□□□ 1.4
CTDSP1-209ENST00000488627 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CTDSP1-209ENST00000488627 SPHKAPQ2M3C7 1700 aa23.77■■□□□ 1.4
CTDSP1-209ENST00000488627 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
CTDSP1-209ENST00000488627 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
CTDSP1-209ENST00000488627 KCNA6P17658 529 aa23.74■■□□□ 1.39
CTDSP1-209ENST00000488627 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CTDSP1-209ENST00000488627 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
CTDSP1-209ENST00000488627 MYO5BQ9ULV0 1848 aa23.74■■□□□ 1.39
CTDSP1-209ENST00000488627 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
CTDSP1-209ENST00000488627 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
CTDSP1-209ENST00000488627 UBAP1LF5GYI3 381 aa23.72■■□□□ 1.39
CTDSP1-209ENST00000488627 HRCP23327 699 aa23.72■■□□□ 1.39
CTDSP1-209ENST00000488627 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
CTDSP1-209ENST00000488627 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
CTDSP1-209ENST00000488627 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
CTDSP1-209ENST00000488627 TOM1O60784 492 aa23.64■■□□□ 1.37
CTDSP1-209ENST00000488627 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
CTDSP1-209ENST00000488627 CCDC144AA2RUR9 1427 aa23.62■■□□□ 1.37
CTDSP1-209ENST00000488627 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
CTDSP1-209ENST00000488627 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
CTDSP1-209ENST00000488627 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
CTDSP1-209ENST00000488627 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
CTDSP1-209ENST00000488627 VGFO15240 615 aaPredicted RBP23.6■■□□□ 1.37
CTDSP1-209ENST00000488627 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-209ENST00000488627 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
CTDSP1-209ENST00000488627 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
CTDSP1-209ENST00000488627 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
CTDSP1-209ENST00000488627 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
CTDSP1-209ENST00000488627 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
CTDSP1-209ENST00000488627 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
CTDSP1-209ENST00000488627 PTPRUQ92729 1446 aa23.57■■□□□ 1.36
CTDSP1-209ENST00000488627 DIP2AQ14689 1571 aa23.57■■□□□ 1.36
CTDSP1-209ENST00000488627 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
CTDSP1-209ENST00000488627 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
CTDSP1-209ENST00000488627 METP08581 1390 aa23.55■■□□□ 1.36
CTDSP1-209ENST00000488627 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
CTDSP1-209ENST00000488627 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
CTDSP1-209ENST00000488627 KIF1BO60333 1816 aa23.54■■□□□ 1.36
CTDSP1-209ENST00000488627 CHD2O14647 1828 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-209ENST00000488627 ADGRF5Q8IZF2 1346 aa23.51■■□□□ 1.35
CTDSP1-209ENST00000488627 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-209ENST00000488627 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
CTDSP1-209ENST00000488627 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
CTDSP1-209ENST00000488627 HSPA1LP34931 641 aa23.48■■□□□ 1.35
CTDSP1-209ENST00000488627 MSH6P52701 1360 aa23.44■■□□□ 1.34
CTDSP1-209ENST00000488627 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
CTDSP1-209ENST00000488627 PPLO60437 1756 aa23.42■■□□□ 1.34
CTDSP1-209ENST00000488627 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
CTDSP1-209ENST00000488627 XRN1Q8IZH2 1706 aaKnown RBP23.4■■□□□ 1.34
CTDSP1-209ENST00000488627 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
CTDSP1-209ENST00000488627 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
CTDSP1-209ENST00000488627 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
CTDSP1-209ENST00000488627 ROBO2Q9HCK4 1378 aa23.37■■□□□ 1.33
CTDSP1-209ENST00000488627 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
CTDSP1-209ENST00000488627 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
CTDSP1-209ENST00000488627 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
CTDSP1-209ENST00000488627 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
CTDSP1-209ENST00000488627 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
CTDSP1-209ENST00000488627 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
CTDSP1-209ENST00000488627 PTCH1Q13635 1447 aa23.33■■□□□ 1.33
CTDSP1-209ENST00000488627 IFT172Q9UG01 1749 aa23.33■■□□□ 1.33
CTDSP1-209ENST00000488627 MYOM2P54296 1465 aa23.33■■□□□ 1.33
CTDSP1-209ENST00000488627 ATF3P18847 181 aa23.33■■□□□ 1.33
CTDSP1-209ENST00000488627 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
CTDSP1-209ENST00000488627 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
CTDSP1-209ENST00000488627 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
CTDSP1-209ENST00000488627 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
CTDSP1-209ENST00000488627 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
CTDSP1-209ENST00000488627 DCCP43146 1447 aa23.3■■□□□ 1.32
CTDSP1-209ENST00000488627 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
CTDSP1-209ENST00000488627 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
CTDSP1-209ENST00000488627 ADGRL3Q9HAR2 1447 aa23.29■■□□□ 1.32
CTDSP1-209ENST00000488627 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
CTDSP1-209ENST00000488627 STK26Q9P289 416 aa23.28■■□□□ 1.32
CTDSP1-209ENST00000488627 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
CTDSP1-209ENST00000488627 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
CTDSP1-209ENST00000488627 TECPR2O15040 1411 aa23.27■■□□□ 1.32
CTDSP1-209ENST00000488627 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
CTDSP1-209ENST00000488627 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
CTDSP1-209ENST00000488627 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
CTDSP1-209ENST00000488627 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
CTDSP1-209ENST00000488627 MST1RQ04912 1400 aa23.23■■□□□ 1.31
CTDSP1-209ENST00000488627 ROBO1Q9Y6N7 1651 aa23.22■■□□□ 1.31
CTDSP1-209ENST00000488627 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.3
CTDSP1-209ENST00000488627 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
CTDSP1-209ENST00000488627 DISP3Q9P2K9 1392 aa23.19■■□□□ 1.3
CTDSP1-209ENST00000488627 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
CTDSP1-209ENST00000488627 ADGRB1O14514 1584 aa23.15■■□□□ 1.3
CTDSP1-209ENST00000488627 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
CTDSP1-209ENST00000488627 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
CTDSP1-209ENST00000488627 LAMC1P11047 1609 aa23.12■■□□□ 1.29
CTDSP1-209ENST00000488627 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
CTDSP1-209ENST00000488627 ORAI2Q96SN7 254 aa23.12■■□□□ 1.29
CTDSP1-209ENST00000488627 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
CTDSP1-209ENST00000488627 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms