RNA–Protein interactions for RNA: ENST00000487842.1

SCML1-207, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 1 (best)

Gene SCML1, Length 4,615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-207ENST00000487842 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
SCML1-207ENST00000487842 CCDC144AA2RUR9 1427 aa6.92□□□□□ -1.3
SCML1-207ENST00000487842 NCOA1Q15788 1441 aa6.92□□□□□ -1.3
SCML1-207ENST00000487842 DHX29Q7Z478 1369 aaKnown RBP6.91□□□□□ -1.3
SCML1-207ENST00000487842 RABEP1Q15276 862 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 STAC3Q96MF2 364 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 TSPY26PQ9H489 355 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 CASKIN1Q8WXD9 1431 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 NUP155O75694 1391 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 GOLGA6L19H0YKK7 550 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 PRXQ9BXM0 1461 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 PPP4R3BQ5MIZ7 849 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 MCTP1Q6DN14 999 aa6.91□□□□□ -1.3
SCML1-207ENST00000487842 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
SCML1-207ENST00000487842 PLCD3Q8N3E9 789 aa6.9□□□□□ -1.3
SCML1-207ENST00000487842 ROCK1Q13464 1354 aa6.9□□□□□ -1.3
SCML1-207ENST00000487842 FHOD3Q2V2M9 1422 aa6.9□□□□□ -1.3
SCML1-207ENST00000487842 EFCAB5A4FU69 1503 aa6.9□□□□□ -1.3
SCML1-207ENST00000487842 CT47B1P0C2W7 299 aaPredicted RBP6.9□□□□□ -1.3
SCML1-207ENST00000487842 KCNJ4P48050 445 aa6.9□□□□□ -1.3
SCML1-207ENST00000487842 INTS3Q68E01 1043 aaKnown RBP6.9□□□□□ -1.31
SCML1-207ENST00000487842 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.31
SCML1-207ENST00000487842 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.31
SCML1-207ENST00000487842 CCP110O43303 1012 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 OFD1O75665 1012 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 CHGAP10645 457 aaKnown RBP6.89□□□□□ -1.31
SCML1-207ENST00000487842 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
SCML1-207ENST00000487842 FOXD1Q16676 465 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 CCDC34Q96HJ3 373 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 CDC45O75419 566 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 PANK3Q9H999 370 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 FOXD4L1Q9NU39 408 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 XRCC6P12956 609 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCML1-207ENST00000487842 USP8P40818 1118 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 NBPF1Q3BBV0 1214 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 AK7Q96M32 723 aa6.89□□□□□ -1.31
SCML1-207ENST00000487842 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
SCML1-207ENST00000487842 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
SCML1-207ENST00000487842 LMOD3Q0VAK6 560 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 SCAPERQ9BY12 1400 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 KIF2AO00139 706 aaPredicted RBP6.88□□□□□ -1.31
SCML1-207ENST00000487842 BCCIPQ9P287 314 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCML1-207ENST00000487842 PRDM4Q9UKN5 801 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 RNF123Q5XPI4 1314 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 ZBTB7CA1YPR0 619 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 CCDC94Q9BW85 323 aaPredicted RBP6.88□□□□□ -1.31
SCML1-207ENST00000487842 BECN2A8MW95 431 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 CLGNO14967 610 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 IFT57Q9NWB7 429 aa6.88□□□□□ -1.31
SCML1-207ENST00000487842 CGNQ9P2M7 1197 aaKnown RBP6.88□□□□□ -1.31
SCML1-207ENST00000487842 MAPKBP1O60336 1514 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 CCDC112Q8NEF3 446 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 HDAC5Q9UQL6 1122 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 U2AF1L5P0DN76 240 aaPredicted RBP6.87□□□□□ -1.31
SCML1-207ENST00000487842 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
SCML1-207ENST00000487842 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
SCML1-207ENST00000487842 U2AF1Q01081 240 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■□□□□ 11.1
SCML1-207ENST00000487842 DMTNQ08495 405 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 CREBRFQ8IUR6 639 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 KANK1Q14678 1352 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
SCML1-207ENST00000487842 KLHL40Q2TBA0 621 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 ANKRD45Q5TZF3 282 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 APAF1O14727 1248 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
SCML1-207ENST00000487842 LEKR1Q6ZMV7 388 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 GCC1Q96CN9 775 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 HSP90B2PQ58FF3 399 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
SCML1-207ENST00000487842 ERCC4Q92889 916 aaPredicted RBP6.86□□□□□ -1.31
SCML1-207ENST00000487842 CCDC146Q8IYE0 955 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 RUNDC1Q96C34 613 aa6.86□□□□□ -1.31
SCML1-207ENST00000487842 NCOA2Q15596 1464 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
SCML1-207ENST00000487842 CTR9Q6PD62 1173 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 TIGD1Q96MW7 591 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 CCDC70Q6NSX1 233 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 TBC1D2Q9BYX2 928 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 DEF6Q9H4E7 631 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 TPM1P09493 284 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 CDCA7LQ96GN5 454 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
SCML1-207ENST00000487842 API5Q9BZZ5 524 aaKnown RBP6.85□□□□□ -1.31
SCML1-207ENST00000487842 GPATCH3Q96I76 525 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 FEZ1Q99689 392 aa6.85□□□□□ -1.31
SCML1-207ENST00000487842 INSRP06213 1382 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 VGLL3A8MV65 326 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 SYNJ1O43426 1573 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 FBLN2P98095 1184 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 ZKSCAN5Q9Y2L8 839 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 TOP2BQ02880 1626 aa6.84□□□□□ -1.31
SCML1-207ENST00000487842 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms