RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
CLIP2-207ENST00000487447 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
CLIP2-207ENST00000487447 UBAP1LF5GYI3 381 aa17.28■□□□□ 0.36
CLIP2-207ENST00000487447 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
CLIP2-207ENST00000487447 LTKP29376 864 aa17.27■□□□□ 0.36
CLIP2-207ENST00000487447 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.35
CLIP2-207ENST00000487447 PPLO60437 1756 aa17.26■□□□□ 0.35
CLIP2-207ENST00000487447 FOXD1Q16676 465 aa17.26■□□□□ 0.35
CLIP2-207ENST00000487447 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
CLIP2-207ENST00000487447 SPATA31E1Q6ZUB1 1445 aa17.26■□□□□ 0.35
CLIP2-207ENST00000487447 ANKRD30BQ9BXX2 1392 aa17.26■□□□□ 0.35
CLIP2-207ENST00000487447 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
CLIP2-207ENST00000487447 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
CLIP2-207ENST00000487447 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
CLIP2-207ENST00000487447 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
CLIP2-207ENST00000487447 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
CLIP2-207ENST00000487447 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
CLIP2-207ENST00000487447 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
CLIP2-207ENST00000487447 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
CLIP2-207ENST00000487447 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLIP2-207ENST00000487447 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
CLIP2-207ENST00000487447 SOCS7O14512 581 aa17.19■□□□□ 0.34
CLIP2-207ENST00000487447 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
CLIP2-207ENST00000487447 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
CLIP2-207ENST00000487447 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
CLIP2-207ENST00000487447 ADAMTS13Q76LX8 1427 aa17.18■□□□□ 0.34
CLIP2-207ENST00000487447 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
CLIP2-207ENST00000487447 CPS1P31327 1500 aa17.17■□□□□ 0.34
CLIP2-207ENST00000487447 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CLIP2-207ENST00000487447 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
CLIP2-207ENST00000487447 CHD2O14647 1828 aaKnown RBP17.16■□□□□ 0.34
CLIP2-207ENST00000487447 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
CLIP2-207ENST00000487447 MYOM2P54296 1465 aa17.14■□□□□ 0.33
CLIP2-207ENST00000487447 NRXN1Q9ULB1 1477 aa17.13■□□□□ 0.33
CLIP2-207ENST00000487447 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
CLIP2-207ENST00000487447 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
CLIP2-207ENST00000487447 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
CLIP2-207ENST00000487447 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-207ENST00000487447 HSPA1LP34931 641 aa17.11■□□□□ 0.33
CLIP2-207ENST00000487447 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
CLIP2-207ENST00000487447 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
CLIP2-207ENST00000487447 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
CLIP2-207ENST00000487447 TOM1O60784 492 aa17.1■□□□□ 0.33
CLIP2-207ENST00000487447 LAMC1P11047 1609 aa17.1■□□□□ 0.33
CLIP2-207ENST00000487447 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-207ENST00000487447 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
CLIP2-207ENST00000487447 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
CLIP2-207ENST00000487447 PIK3C2GO75747 1445 aa17.08■□□□□ 0.32
CLIP2-207ENST00000487447 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
CLIP2-207ENST00000487447 SLC26A8Q96RN1 970 aa17.08■□□□□ 0.32
CLIP2-207ENST00000487447 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-207ENST00000487447 KCNA6P17658 529 aa17.05■□□□□ 0.32
CLIP2-207ENST00000487447 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
CLIP2-207ENST00000487447 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
CLIP2-207ENST00000487447 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
CLIP2-207ENST00000487447 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-207ENST00000487447 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
CLIP2-207ENST00000487447 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
CLIP2-207ENST00000487447 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
CLIP2-207ENST00000487447 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
CLIP2-207ENST00000487447 METP08581 1390 aa17.02■□□□□ 0.31
CLIP2-207ENST00000487447 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
CLIP2-207ENST00000487447 BCANQ96GW7 911 aa17■□□□□ 0.31
CLIP2-207ENST00000487447 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
CLIP2-207ENST00000487447 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
CLIP2-207ENST00000487447 ADGRB1O14514 1584 aa16.98■□□□□ 0.31
CLIP2-207ENST00000487447 TECPR2O15040 1411 aa16.97■□□□□ 0.31
CLIP2-207ENST00000487447 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
CLIP2-207ENST00000487447 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
CLIP2-207ENST00000487447 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
CLIP2-207ENST00000487447 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
CLIP2-207ENST00000487447 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
CLIP2-207ENST00000487447 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
CLIP2-207ENST00000487447 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
CLIP2-207ENST00000487447 LRPPRCP42704 1394 aaKnown RBP16.92■□□□□ 0.3
CLIP2-207ENST00000487447 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-207ENST00000487447 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
CLIP2-207ENST00000487447 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
CLIP2-207ENST00000487447 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
CLIP2-207ENST00000487447 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
CLIP2-207ENST00000487447 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-207ENST00000487447 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-207ENST00000487447 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
CLIP2-207ENST00000487447 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-207ENST00000487447 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
CLIP2-207ENST00000487447 DCCP43146 1447 aa16.89■□□□□ 0.29
CLIP2-207ENST00000487447 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
CLIP2-207ENST00000487447 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
CLIP2-207ENST00000487447 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
CLIP2-207ENST00000487447 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
CLIP2-207ENST00000487447 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
CLIP2-207ENST00000487447 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
CLIP2-207ENST00000487447 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
CLIP2-207ENST00000487447 MSH6P52701 1360 aa16.86■□□□□ 0.29
CLIP2-207ENST00000487447 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
CLIP2-207ENST00000487447 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
CLIP2-207ENST00000487447 TMEM132EQ6IEE7 984 aa16.84■□□□□ 0.29
CLIP2-207ENST00000487447 ADGRB2O60241 1585 aa16.83■□□□□ 0.28
CLIP2-207ENST00000487447 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
CLIP2-207ENST00000487447 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms